Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_03g0023830 | OGI:03060120 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr03:22923897-22930379 | ||||||||
| Gene Symbol | GELP52, OsGELP52 | ||||||||||
| DNA seq | CTGATAAACTTCAACAATCACTTATTATGAATTTGCTATATTATATGATTCTACCGCTATATGTACCAATCGTAAGTAAAAACACTAGTATACTTTACATGGTATGTATATTTCTATGGCTGTACTTGAAGCTTGAAAAAAGTGGAATCACAAGCAGCTCGATCGATCGATCAGTACACCGTGAAGATGAGATGAAGGCTACATATCAGCGAGCTGCCTGATGTTCACGGGGAAGACGAGCGGCGGCGAGCCGTCGAACGCGACGGCGGTGAGCATCCGCGCGGTGGCCTCGGTCGGGTGGTAGAAGTCCCAGAACACGTAGCCCGTCCGGTTGGCGCAGTAGAAGCTGACCGGGGTGCAGCCGATCTTGGCGTTCATGTCCCCGAGGCCGCAGCACGCCGCCCTCGCCTCCGCGAACCCGTACTCCGCCGGCCGCTCGATGTACCGGAGCAGCGCCGCGCTGGAGTCGAACACCGCGTAGCGGAGGCCCGCGCGCCGCTCGGCCATCCCGCGCAGCAGCGACGCCGCCGCCGCGTTGTACCGCGCCGACGCGTCGTTGGCCTCGCCGCTGCAGCCCCTGTCGGCGCTCAGCTCCCGCAGCGACGGGCAGCAGCCCACCGGCCCCGTCCCCAGGAACAGCACCCTGCGCGCCCCGAGGTCGTACAGCCTCTGAACACAATCGATCGAACACCATTAGAACGTAACACCATGAAATTGATCATTGATGGTCGATTCAATTATCGGTCGATCGGTGACCTCGATCCTCACCTGTAGCTGGCCGGTGAGCGACTGGATGAGGGCGTCGACGAACTGCTCCATAGGGTTGGTGGCCTTGGCGGCGGCGCTGGACCTGACGTAGCCGATGATGTCATTGCTGCCGATGGTGATCGCGAAGAGGGATTTCGCCAGGTGGCTCGCCGCCTGGGCCTCGCCGAGGCTCTGCACCAGCGACGCCTGCACCTTGGAGTAGTACTCGATCTGCTTGTCGAAGCTGATGCACTGATCCTGCATTAATGTTTAACACCAGTATAATTAAAACCAATTTTCAACTCTAAAACAAATTGACTATGTCACTGTCGACAGAAATATGTAAACCATTTTTATTAAGGGGCTGTTCACATGATTTTTTAGGTTTTCATCATGCAGTGTTTCACCAAGTAGATCGATAATGTTTCACCAAATAGATCGAAAATGTTTCAATCTTTTAAAAAAGCTGGAACACAATCAAATCATCCCCATGAAACATTTTGCTACAATGTATGAAATAACAGTTCCGAATATATTGAAACATGAAACAAATTTGAGTACATCGAGAAAAAGTCTATATGACATTTGCATTATTTTTTTAGGCTTCCATCATGCAGATTTTGAAGCCAATCGGGTGCTGTTTCATCAAGTAGATCGAAAATGTTTCACCAAGTAGAACGAAAATGTTTCAATCTTTTAAAAAGCTGAAACACAATCAAATTATCTCATGAAACATTTTGCTACGACGTATGAAACAACAGCTCTAAATATATTGAAACATGAATGATTTAGATATAAAAAATCATTCGACAACTATTTAGCCTTCATGTTTTATTAATTATTAAAAAAATGATCTCTTTAGTGCGTTGACAACTGACATACATACATATAATTATAATCCTACATCCTGGTAATCTATGAGAAAAGTTTGTTATTGCAATTACGTGTACGAGTTGAAATTACTTAGAACTACCTTGTTTGTAGAGTTGAAAACTCCGGCGCCACCTGAAGCAAAGTTGACGCCATTCACGTAGTTAGCACTGCTGCTTGACGATATGGCGAGGTACGGTGGAGATGTCGCCAACCCAAGGTTCTCAGCTGCAATGCACCATGCATATCAAAAAGGACCAAGTGATAAATTAATTTATGATCGGATACACAAGGATCGGGAAGCTTGTAATAACATGATTAAATTAACGTACTATATATGTAATAAGCAGGTTCAAAATTCCGGACTGAAATTTTCAAAATTTTGGGTCTATCGCCCCTCCCCCCCCCCCCCAAACCAAAACTATTCCACCCTTTTTTCCATTTTTTGTGAATTTGGCAAATTTTGTTTAAATGTGACCAAATTTTATTAAAATTCAAATTATTTCAGTACCCTGATAGAAATAGCCAAAATAAAATTTTGAACCCTGGTGGTTAGTATGTAAGGGCTAAGCTGTGTCGAACGTACGTATGTACAAGTTGAAAATTGTAATTGCTAATGCACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTCTTGTTTTTCTGACTTTTTAAAAAAAAGCTGTTTGCTAGTTGTCCTCTCACACCCTTCTTTTTTTTCTCGTCAATAATGTAGAGGTCCCCTTCCAAAATCGAAACTTACATATTTTTTATGGACTAATTCATGAGAAACTTATGCCTCTAGCCTATTGGAGCTCCACCATATGGCACATAACCTATACATAGAAGGTCAATCCAGCAAGCTTGCAAGAGATAAATTAAAGAAACCAGTGTTGTAGCCAAACTAAAGAATGATAAAATAAAAATTCTAAATTAATTAACCATAGCATTTTTTAGAACAATAATAACCAGCTTGTCAACATCAAATAGGTAAATCGCCAAAATCCGATCCTCAAATGTAGAATAATTAAGGACGTACACGTACACGTACGGTAATCTGACCCACGAAAGTGAAGTAGAGAATGACACCAAATTTGTTCTCAATTGATTGGCTTCGCCAACGGACAATTTCCATTTCACTTTCGTTGGGGGAAAAAGTTAAGGCCAGGCTGAAAAGGACATATCGGAAAAACCCCTTGGCTAGATATCTGATATCTCATATGATGTGCTTGACCTATCATTCATTAGGTAATATGTCTCCAGTTATCTTTAAAAAATATAATTTGTCTCCACCTAAATTTATAGCTACCAAAAACAAAAATTAACAAAATAGAGAAGGCAATACTATGGTGTGGCTTCACCTAGTAGGTTGAAATCTAATTGCACACGAATATATGGAGAAACTATAAACTATAGTTCATTATAGTGTACATCCAACTATTGCGTGAACCTTAAAATTTATATGTGTTTATATATTTTTATAGGTATAACAACCAAGGAAATAAACATATCTTGAGCGTACAAGCAACGTCGGATGAACACGTACAGAAATTGATTACAAGCTGTATGGAATCATCAACAAGTAGCCAACGTGCATCAATCAACATTTTGTCATTGGTTCTCAACGAATTTAGAAAAGAAAATAAAATTACTCCCTTTATTTTATAATATAAGTCGTTTGATTTTTTTTTCTTAGTGACTAAATTTATAGAAAAACATAGTAATATTTTTAATAAAAACAAATTTTATCAAAATATATTCTATATTAAATTTAATAAAACTAATTTAATCAAATATAAAGAATTTTGACTAAGAAAATAGTCAAAATGATTATAATATGAAAAAAAAGGAGTGCATGGAAAAAATATATTTTTATTTATGTCAATACAAGTAGCATGTCACACCATGACAGTTCATGGAAGATATTTTATTTCAGAAAAAATAAAACTCTGTAGAAGATATTTAGTGCCGAACCAACTAGAGCCAACTGGTAAAATCTATGCGTTACCTTCTTGGTTGAATTTGCCTAGACAACATGCGGACTTAATTAGTAGCAGTAGTCTTGTTGCCTTTATTTTAAGCACGTCCTGTTAAGTACGTATGCCAATAGTACGTGTTCAGTTAGCCTATGATAAAAGGTTGACTATATACCGTTGGTACGACGTCAACGATAGCACACCTGGTGTTGTTACGGAGTAATTGTTAACATACAAAATTCAAATTACGCCACTAACAGATATTATAGAAACGTATTTCTACCTACCCCTTTCATCTAAAAATATAGCTATTTCTAACTGGTTACCTGAATAAATTTGTGTCGGAGGAAGTAGAATCAGCAAACTTAATCAATTAAGGTCAGCCTGCACTGCTGAACGGTTGGTCATAGTGTGTTTTCTTTTTAAATATGTGGCACTGCTATTAACTTCTCTAATAAAAAGTCAACACATAATATATACTTACTCCCTCCGTCCCAAAATAAGTGTAGTTTTACACTATTCATGTTCAACGTTTGACCGTCCGTCTTATTTGAAAATTTTTTATGATTAGTATTTTTATTGCTATTAGATGATAAAACATGAATAGTACTTTATGTGTGACTAAATGTTTTTAATTTTTTCACAAATTTTTCAAATAAGACGGACGGTCAAACGTTGAACGTGAATAGTGCAAAACTGCACTTATTTTGGGACGGAGGTAATACTAATGTATACTCCCTCCATTCCAAATTGATATACATATAATTTTTTTGAGGTTATTCCTAAATGATCTACATATTTGTGTTCATTTATTAGAGTCTATTCGTTATTTGTGCATTGGAGTAAATGGACATTAATGTATGCATCCATGCACACAGATATTTATAATCTACATGCAATATCTTGATTTGCTATTGGCTAGAAAATATTGGGGATGGTGCATGCTTTGAGTTTGTTTGTAGAGTAAATATAGTATGAGAGAGTTATTAGCTTTTCTTGGTCTTGGTATAGCTATGAAATATGTGATCAATTTGGAATGGAGGGAGTACTTAGTAAGATACGTTGGACCATTCGTCTTGTTAAAAAATATGTAATTATTATTTATTTTATTATGATTAATATATCATCAAATGTTTTTAAGCATGAATTAAATATTGGTTATGTTTGCATAAAAGTTTTAAATAAAAGAATAATCAAACGTTGATACAAGTCAACGGCGTCGTACTTGAATAAAACGGGGGTAGTATATCAGATGAGTAGCAAAACAGGAAAAATCAAGAAAACAAGTCAAGCTAGGCGTAAAAGAAGATTCGACCAAATGCAACGTGACTACGCGAGACCGGCGCGGCGTGTTTGTTAGGGCGAGACAGCAGGCCGTCACAGCAGGGCAATCGGTCGTTTGTGTGTGCGCGGCTGGTGCGACGGTCAGCACGACGTCTCGCCGTCTGGGTCACACCGCGCTATCGCTCTCGTTGTCTCTAATATGATTCAATTTGGTTGATTACTATTATAAGAAATCATTTTTTTAGATTTCAAGCATATTTATTATTAATACAAGAAACACTTTTGTCCTGTTTAATTTGGTACTAATTTGAAACTTCGTGGGCGTTAGCCTAGCGCAAAAAATCTTTTGTGTTATGGACTTCGACTTAGGAGCTCGGTAGTGAACACAATAACTCTTCAAAATTTGTTAGTATAAAATATAATAACTTCTCAAACTAAAATAATTATTATATTCTCAACCAATCATAACATTTTACCATCTAGAATCCCCACCCACCTCTTCTTAACCAATCACACAACTTATCACATTTAATTCCATCAATTTTTAATGCACGTGTGGAACTCATCTCGAACTCCTTATACTTTTGGGATGAATGTAATAGTTACTAGCTAAGGGCACCCGCAATGGTTATCTATAGGCTCTCTACAAGAGATCCATGTCAGCATATTTTTCTACTTGGAAGATATTAAATGAAGAGAGAGAGCAAAGCTATCTACTAACCTGGAGATAGTCTATAGAGAAAAACGAGGCAATAGATTAGAAAGCTATAGATACCAATGTAGACATACTATTGAAGTGGTTTACTATTAATCTAGTGTATTGCTGATATGTACATGTTTTATAGATAGCACCTTACTTTACCATTGTGGGTGCTCTAAGTATCTGTAGAGGAATGAGATCGGTCACCAGTGAAATGCAATGCACAACATAATGGTAATTAAGTCATGAATTTGCATGCATGCATGAGCCATGAGGCTGGATGCACGCACGCGTGACGCATGAGGAAGGCATGCAGATTATTGCAGGATTGTACTATCATTCATTCAGAAAAAGAGGGGGGGGGGGGGGGGGGGGGGGGGGCAGAAGAAGCTAGCGACGACGACGTAAACGCACCGAGGAAATCGGGGAAGTTCTTGCCGTTGCTGAAGCGGCCGGTGGCCTTCCCCCCCGGGTAGTCGATCCCGTTGTGCGGGAAGTCCGCCTTGAGCAGCGTCAGCAGGTGGTTGTTGTTCCCCACGTCCGCCAGCGAGTCGCCGAGCACGTACACCGCCGGCACCGCCGCCGCTAAAGACGAGGCGGCGGCGGCGACCAGAACGACGATGGCGAAGGACGCCGCAGCGATTGTGTTATTACCAGCATCCATCGATCTCGATCGCTCACACAGCTTGCTAGCTGCAAACTACAGTAGTACGTACAGCGCTTAGCTGATGCTTCTCCAGAGTCCAGCTGCTACGTATACAGCTCGCCGGCTCGTCACTTGCACATGAGCTAGGGGTGCGTGCGTTGCGTGCGTGAGCTTTCTTCACT
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| CDS seq | ATGGATGCTGGTAATAACACAATCGCTGCGGCGTCCTTCGCCATCGTCGTTCTGGTCGCCGCCGCCGCCTCGTCTTTAGCGGCGGCGGTGCCGGCGGTGTACGTGCTCGGCGACTCGCTGGCGGACGTGGGGAACAACAACCACCTGCTGACGCTGCTCAAGGCGGACTTCCCGCACAACGGGATCGACTACCCGGGGGGGAAGGCCACCGGCCGCTTCAGCAACGGCAAGAACTTCCCCGATTTCCTCGCTGAGAACCTTGGGTTGGCGACATCTCCACCGTACCTCGCCATATCGTCAAGCAGCAGTGCTAACTACGTGAATGGCGTCAACTTTGCTTCAGGTGGCGCCGGAGTTTTCAACTCTACAAACAAGGATCAGTGCATCAGCTTCGACAAGCAGATCGAGTACTACTCCAAGGTGCAGGCGTCGCTGGTGCAGAGCCTCGGCGAGGCCCAGGCGGCGAGCCACCTGGCGAAATCCCTCTTCGCGATCACCATCGGCAGCAATGACATCATCGGCTACGTCAGGTCCAGCGCCGCCGCCAAGGCCACCAACCCTATGGAGCAGTTCGTCGACGCCCTCATCCAGTCGCTCACCGGCCAGCTACAGAGGCTGTACGACCTCGGGGCGCGCAGGGTGCTGTTCCTGGGGACGGGGCCGGTGGGCTGCTGCCCGTCGCTGCGGGAGCTGAGCGCCGACAGGGGCTGCAGCGGCGAGGCCAACGACGCGTCGGCGCGGTACAACGCGGCGGCGGCGTCGCTGCTGCGCGGGATGGCCGAGCGGCGCGCGGGCCTCCGCTACGCGGTGTTCGACTCCAGCGCGGCGCTGCTCCGGTACATCGAGCGGCCGGCGGAGTACGGGTTCGCGGAGGCGAGGGCGGCGTGCTGCGGCCTCGGGGACATGAACGCCAAGATCGGCTGCACCCCGGTCAGCTTCTACTGCGCCAACCGGACGGGCTACGTGTTCTGGGACTTCTACCACCCGACCGAGGCCACCGCGCGGATGCTCACCGCCGTCGCGTTCGACGGCTCGCCGCCGCTCGTCTTCCCCGTGAACATCAGGCAGCTCGCTGATATGTAG
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| Protein seq | MDAGNNTIAAASFAIVVLVAAAASSLAAAVPAVYVLGDSLADVGNNNHLLTLLKADFPHNGIDYPGGKATGRFSNGKNFPDFLAENLGLATSPPYLAISSSSSANYVNGVNFASGGAGVFNSTNKDQCISFDKQIEYYSKVQASLVQSLGEAQAASHLAKSLFAITIGSNDIIGYVRSSAAAKATNPMEQFVDALIQSLTGQLQRLYDLGARRVLFLGTGPVGCCPSLRELSADRGCSGEANDASARYNAAAASLLRGMAERRAGLRYAVFDSSAALLRYIERPAEYGFAEARAACCGLGDMNAKIGCTPVSFYCANRTGYVFWDFYHPTEATARMLTAVAFDGSPPLVFPVNIRQLADM |
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| Function | GDSL esterase/lipase At5g55050 [UniProtKB/Swiss-Prot:Q9FIA1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_03g0023830 | OsIR64_03g0023830.01 | Chr03 | 22923897 | 22930379 | - | NAM | ||
| CDS seq | ATGGATGCTGGTAATAACACAATCGCTGCGGCGTCCTTCGCCATCGTCGTTCTGGTCGCCGCCGCCGCCTCGTCTTTAGCGGCGGCGGTGCCGGCGGTGTACGTGCTCGGCGACTCGCTGGCGGACGTGGGGAACAACAACCACCTGCTGACGCTGCTCAAGGCGGACTTCCCGCACAACGGGATCGACTACCCGGGGGGGAAGGCCACCGGCCGCTTCAGCAACGGCAAGAACTTCCCCGATTTCCTCGCTGAGAACCTTGGGTTGGCGACATCTCCACCGTACCTCGCCATATCGTCAAGCAGCAGTGCTAACTACGTGAATGGCGTCAACTTTGCTTCAGGTGGCGCCGGAGTTTTCAACTCTACAAACAAGGATCAGTGCATCAGCTTCGACAAGCAGATCGAGTACTACTCCAAGGTGCAGGCGTCGCTGGTGCAGAGCCTCGGCGAGGCCCAGGCGGCGAGCCACCTGGCGAAATCCCTCTTCGCGATCACCATCGGCAGCAATGACATCATCGGCTACGTCAGGTCCAGCGCCGCCGCCAAGGCCACCAACCCTATGGAGCAGTTCGTCGACGCCCTCATCCAGTCGCTCACCGGCCAGCTACAGAGGCTGTACGACCTCGGGGCGCGCAGGGTGCTGTTCCTGGGGACGGGGCCGGTGGGCTGCTGCCCGTCGCTGCGGGAGCTGAGCGCCGACAGGGGCTGCAGCGGCGAGGCCAACGACGCGTCGGCGCGGTACAACGCGGCGGCGGCGTCGCTGCTGCGCGGGATGGCCGAGCGGCGCGCGGGCCTCCGCTACGCGGTGTTCGACTCCAGCGCGGCGCTGCTCCGGTACATCGAGCGGCCGGCGGAGTACGGGTTCGCGGAGGCGAGGGCGGCGTGCTGCGGCCTCGGGGACATGAACGCCAAGATCGGCTGCACCCCGGTCAGCTTCTACTGCGCCAACCGGACGGGCTACGTGTTCTGGGACTTCTACCACCCGACCGAGGCCACCGCGCGGATGCTCACCGCCGTCGCGTTCGACGGCTCGCCGCCGCTCGTCTTCCCCGTGAACATCAGGCAGCTCGCTGATATGTAG
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| Protein seq | MDAGNNTIAAASFAIVVLVAAAASSLAAAVPAVYVLGDSLADVGNNNHLLTLLKADFPHNGIDYPGGKATGRFSNGKNFPDFLAENLGLATSPPYLAISSSSSANYVNGVNFASGGAGVFNSTNKDQCISFDKQIEYYSKVQASLVQSLGEAQAASHLAKSLFAITIGSNDIIGYVRSSAAAKATNPMEQFVDALIQSLTGQLQRLYDLGARRVLFLGTGPVGCCPSLRELSADRGCSGEANDASARYNAAAASLLRGMAERRAGLRYAVFDSSAALLRYIERPAEYGFAEARAACCGLGDMNAKIGCTPVSFYCANRTGYVFWDFYHPTEATARMLTAVAFDGSPPLVFPVNIRQLADM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.594426 | 0.0 | 0.085291 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0580200 | RBH | 1.778902 | 1.714997 | 1.990457 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g38470 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0580200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0024410 | RBH | 0.515188 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0024220 | RBH | 0.0 | 0.0 | 0.713908 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0024300 | RBH | 0.415621 | 0.0 | 1.125290 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0024310 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0024040 | RBH | 1.446509 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0367600 | RBH | 1.031184 | 0.094097 | 0.042881 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0023850 | RBH | 0.0 | 0.0 | 0.114458 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0369800 | RBH | 2.654229 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0024120 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0024160 | RBH | 0.105432 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0024230 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0024000 | RBH | 0.740721 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0023890 | RBH | 0.407158 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G023950 | RBH | 0.885725 | 0.0 | 0.457416 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0023910 | RBH | 1.016372 | 0.0 | 5.181606 |
