Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_03g0016140 | OGI:03032600 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr03:12539296-12541563 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTTTTGCCTCTGCAGTCTACCGTGGGAACAAACTCAATTGGGATGTAAACATTTCTTTGTGCTCATGGCATGGTGTAACTTGCTCGCCGGACCGATCACGCATATCTGCCCTTAGGGTACCAGCTGCTGGCCTGATTGGTGCAATTCCTCCAAATACCCTTGGCAGGCTTGTCTCCCTCCAAGTGTTAAGCCTGAGATCTAATCGTTTGATTGGAAGTATCCCATCTGATATCACCTCACTTCCTTCTTTGCAGTCCATATTTCTTCAGGATAATGAACTGTCAGGAGATTTGCCTTCTTTTTTCTCTCCAACCCTTAATACCATTGACCTATCCTACAATTCCTTTGCAGGACAAATCCCTGCAAGTTTGCAAAATCTTACTCAATTATCTACCCTGAACTTGTCAAAAAATTCTCTCTCTGGACCTATCCCTGATCTCAAACTTCCGAGCTTAAGACAGTTAAATCTGAGCAACAATGGGTTGAATGGCTCAATTCCTCCCTTCCTTCAAATATTCTCAAACAGTTCATTCTTGGGGAACCCTGGATTGTGCGGGCCACCTCTAGCTGAATGTTCTCTTCCTTCACCAACATCCTCACCAGAATCTTCATTACCACCACCATCAGCATTGCCACATCGTGGGAAGAAAGTAGGTACTGGCTCTATAATTGCAGCTGCAGTTGGGGGCTTTGCTGTATTTCTGCTAGCTGCTGCGATATTTGTCGTGTGCTTTTCTAAGAGGAAGGAGAAGAAAGATGATGGATTGGATAACAATGGTAAAGGCACTGATAATGCAAGGATTGAGAAGCGCAAAGAGCAAGTCAGTAGCGGTGTCCAAATGGCCGAGAAGAACAAATTGGTTTTCTTGGATGGATGTAGTTATAACTTTGACTTGGAGGATTTACTGAGAGCTTCTGCCGAAGTCCTTGGTAAGGGGAGCTATGGGACTGCCTACAAAGCTATACTTGAGGATGGCACCATAGTGGTCGTTAAGAGGCTAAAGGACGTCGTGGCAGGGAAGAAAGAATTTGAGCAGCAAATGGAGCAAATTGGGAGGGTAGGCAAACATGCAAACCTTGTGCCTCTTCGCGCTTACTACTACTCAAAGGATGAGAAACTTGTCGTCTATGAGTATGTTGCCACCGGCAGCTTTTCAGCCATGTTGCACGGTATGCTTATGTCTTTCACTACTAAATGCTTTACATTTGATTTCTGATATTGATCAATTTTTCCAGGTAGAAATCTAACAATCCATGATGTATCAAAGCTAATTTACAAGCACAAAATGCAATGCAAGCACGCAACCAAAAGTTATTTCTCATTTTTCTCACAAACTTCTGATTAACAGGTATTAAGGGTATTGTCGAGAAGACCCCGTTAGACTGGAATACCAGGATGAAGATTATACTTGGAACAGCGCGTGGTATAGCACACATTCATGCAGAAGGCGGCTCCAAGCTCGCCCATGGCAATATCAAGGCAACCAATGTACTCCTCGACCAAGACCACAACCCCTACGTCTCAGACTACGGGCTGAGTGCCTTGATGAGCTTCCCCATCAGCACATCCCGGGTTGTTGTCGGTTACCGTGCTCCAGAGACCTTCGAATCCAGGAAATTCACTCACAAGTCCGATGTTTACAGCTTCGGTGTTCTCCTCATGGAGATGCTGACTGGAAAAGCACCCCTTCAGTCACAAGGACAGGACGATGTCGTGGATCTACCAAGGTGGGTGCATTCCGTGGTCCGGGAGGAGTGGACCGCTGAGGTGTTCGACGTTGAGCTGATGAAGTACCTGAACATAGAAGACGAACTGGTGCAGATGCTCCAGCTCGCAATGGCGTGCACGTCGCGGTCCCCTGAACGGCGCCCGACGATGGCGGAGGTGATCAGGATGATCGAGGAGCTCCGGCAGTCTGCTTCAGAGAGCCGCGATTCCTCCAACGAAAATGCCAGGGAATCCAATCCTCCTTCGGCGTAATGCCTGACGAGCTGCTGTGTGGTTTACTGGTTTGTATGTTTGCAGGTTGCAGCAATTCATTTAGAATTAAGGCTGGTCGTGATGGCCTCTTCAATGTAGCCAGAAGCTTTCAGCACTGGCACTATGTAGAAGCATTGCATGATGTGCAAGTTGATTTGCTGGCTTCTTGACCTGTATTTACATGCTGTGCTCCGGTGTTGGTAACTTGCGTTCATTAGAAATTGTCACTAGGGAGTCTTTTTCTATGGGGAAAAAAAATCAAGGTAGAGGAGACAACGTGATTGGCA
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| CDS seq | ATGGCCGAGAAGAACAAATTGGTTTTCTTGGATGGATGTAGTTATAACTTTGACTTGGAGGATTTACTGAGAGCTTCTGCCGAAGTCCTTGGTAAGGGGAGCTATGGGACTGCCTACAAAGCTATACTTGAGGATGGCACCATAGTGGTCGTTAAGAGGCTAAAGGACGTCGTGGCAGGGAAGAAAGAATTTGAGCAGCAAATGGAGCAAATTGGGAGGGTAGGCAAACATGCAAACCTTGTGCCTCTTCGCGCTTACTACTACTCAAAGGATGAGAAACTTGTCGTCTATGAGTATGTTGCCACCGGCAGCTTTTCAGCCATGTTGCACGGTATTAAGGGTATTGTCGAGAAGACCCCGTTAGACTGGAATACCAGGATGAAGATTATACTTGGAACAGCGCGTGGTATAGCACACATTCATGCAGAAGGCGGCTCCAAGCTCGCCCATGGCAATATCAAGGCAACCAATGTACTCCTCGACCAAGACCACAACCCCTACGTCTCAGACTACGGGCTGAGTGCCTTGATGAGCTTCCCCATCAGCACATCCCGGGTTGTTGTCGGTTACCGTGCTCCAGAGACCTTCGAATCCAGGAAATTCACTCACAAGTCCGATGTTTACAGCTTCGGTGTTCTCCTCATGGAGATGCTGACTGGAAAAGCACCCCTTCAGTCACAAGGACAGGACGATGTCGTGGATCTACCAAGGTGGGTGCATTCCGTGGTCCGGGAGGAGTGGACCGCTGAGGTGTTCGACGTTGAGCTGATGAAGTACCTGAACATAGAAGACGAACTGGTGCAGATGCTCCAGCTCGCAATGGCGTGCACGTCGCGGTCCCCTGAACGGCGCCCGACGATGGCGGAGGTGATCAGGATGATCGAGGAGCTCCGGCAGTCTGCTTCAGAGAGCCGCGATTCCTCCAACGAAAATGCCAGGGAATCCAATCCTCCTTCGGCGTAA
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| Protein seq | MAEKNKLVFLDGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEDGTIVVVKRLKDVVAGKKEFEQQMEQIGRVGKHANLVPLRAYYYSKDEKLVVYEYVATGSFSAMLHGIKGIVEKTPLDWNTRMKIILGTARGIAHIHAEGGSKLAHGNIKATNVLLDQDHNPYVSDYGLSALMSFPISTSRVVVGYRAPETFESRKFTHKSDVYSFGVLLMEMLTGKAPLQSQGQDDVVDLPRWVHSVVREEWTAEVFDVELMKYLNIEDELVQMLQLAMACTSRSPERRPTMAEVIRMIEELRQSASESRDSSNENARESNPPSA |
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| Function | Probable inactive receptor kinase At5g58300 [UniProtKB/Swiss-Prot:Q9LVM0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_03g0016140 | OsIR64_03g0016140.01 | Chr03 | 12539296 | 12541563 | + | NAM | ||
| CDS seq | ATGGCCGAGAAGAACAAATTGGTTTTCTTGGATGGATGTAGTTATAACTTTGACTTGGAGGATTTACTGAGAGCTTCTGCCGAAGTCCTTGGTAAGGGGAGCTATGGGACTGCCTACAAAGCTATACTTGAGGATGGCACCATAGTGGTCGTTAAGAGGCTAAAGGACGTCGTGGCAGGGAAGAAAGAATTTGAGCAGCAAATGGAGCAAATTGGGAGGGTAGGCAAACATGCAAACCTTGTGCCTCTTCGCGCTTACTACTACTCAAAGGATGAGAAACTTGTCGTCTATGAGTATGTTGCCACCGGCAGCTTTTCAGCCATGTTGCACGGTATTAAGGGTATTGTCGAGAAGACCCCGTTAGACTGGAATACCAGGATGAAGATTATACTTGGAACAGCGCGTGGTATAGCACACATTCATGCAGAAGGCGGCTCCAAGCTCGCCCATGGCAATATCAAGGCAACCAATGTACTCCTCGACCAAGACCACAACCCCTACGTCTCAGACTACGGGCTGAGTGCCTTGATGAGCTTCCCCATCAGCACATCCCGGGTTGTTGTCGGTTACCGTGCTCCAGAGACCTTCGAATCCAGGAAATTCACTCACAAGTCCGATGTTTACAGCTTCGGTGTTCTCCTCATGGAGATGCTGACTGGAAAAGCACCCCTTCAGTCACAAGGACAGGACGATGTCGTGGATCTACCAAGGTGGGTGCATTCCGTGGTCCGGGAGGAGTGGACCGCTGAGGTGTTCGACGTTGAGCTGATGAAGTACCTGAACATAGAAGACGAACTGGTGCAGATGCTCCAGCTCGCAATGGCGTGCACGTCGCGGTCCCCTGAACGGCGCCCGACGATGGCGGAGGTGATCAGGATGATCGAGGAGCTCCGGCAGTCTGCTTCAGAGAGCCGCGATTCCTCCAACGAAAATGCCAGGGAATCCAATCCTCCTTCGGCGTAA
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| Protein seq | MAEKNKLVFLDGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEDGTIVVVKRLKDVVAGKKEFEQQMEQIGRVGKHANLVPLRAYYYSKDEKLVVYEYVATGSFSAMLHGIKGIVEKTPLDWNTRMKIILGTARGIAHIHAEGGSKLAHGNIKATNVLLDQDHNPYVSDYGLSALMSFPISTSRVVVGYRAPETFESRKFTHKSDVYSFGVLLMEMLTGKAPLQSQGQDDVVDLPRWVHSVVREEWTAEVFDVELMKYLNIEDELVQMLQLAMACTSRSPERRPTMAEVIRMIEELRQSASESRDSSNENARESNPPSA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.092480 | 0.871651 | 0.602306 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0332900 | RBH | 0.605371 | 0.726012 | 4.945776 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g21510 | RBH | 0.419213 | 0.538532 | 1.340491 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0332900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0016640 | RBH | 0.000000 | 11.300094 | 1.803610 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016470 | RBH | 0.040215 | 7.189916 | 1.220164 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016500 | RBH | 0.0 | 16.781542 | 3.000094 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016490 | RBH | 0.0 | 0.220179 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0016260 | RBH | 1.046850 | 29.503462 | 4.319451 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0202800 | RBH | 3.7830905 | 21.4035805 | 2.7003185 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028250 | RBH | 0.930994 | 0.949834 | 3.295200 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0206900 | RBH | 4.611362 | 12.8914965 | 38.7917345 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0016380 | RBH | 0.000000 | 0.550652 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0016400 | RBH | 0.435740 | 10.468317 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0016450 | RBH | 0.0 | 41.126930 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0016310 | RBH | 0.513963 | 2.012425 | 0.549164 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0016240 | RBH | 0.0 | 9.402611 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G016200 | RBH | 0.0 | 1.276691 | 3.755410 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0016150 | RBH | 0.0 | 17.383999 | 2.435219 |
