Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_03g0005230 | OGI:03010190 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr03:3830246-3836630 | ||||||||
| Gene Symbol | SUT1, OsSUT1, OsSUT2 | ||||||||||
| DNA seq | CACTTTCACTTAGTTCACTGCACTTCTCCTGACCATTCATTACACACTAATTACCAAGCACACTGCACACACACACAACACAAAACAGTTTTACAGTTCCATATTATCTGCATGATCTGCTTATTCTCTTCTACCGAGGTGGCAACAAAGCGTGGGCCCCAGCTGCAGGGCCACCTCACCTCTTCCTAATTAACAGCCTTAATTAATTAATTACCCTATGTAAAAAAAAAGAGGGGGCGCCTTTGATCCATTGCAAACGAGAACTACAAAGCTCACCACTTCCGGCGGCGCTGCTCCGGCCGCCGCCGCCGCCGCAGCCGGCGGCGAGAGCGGGGCGGTCAGTGACCGCCGCCCATGCTGACCGACCGGAACTGGCGCTTGGAGATCTTGGGCAGCAGGAATATTCCGGCGACGCCGCCGATGAGCGCGAATCCCGAGGCGAGGCCGAACGCCGGGATGTTCCCCTTCCCGAACAGCTCGTCCCACGGCCCGGCTCCCAGCGCGATGACCACCTGAGGGAAGAACACCACGCAACCATGAATCCATGAGCATTCAAATTCTAATAATCCATGAAGTATATCTGATTCGGTTTCAAGGGAAACGGATTAGAATTTGGCAGCTAATTAACCTGAGGGATGACGATGGAGATGTTGAGGACGCCGGTGCAGAGCCCTGCAGATCGCCATGGATTAGACCAGCATCCAAACAACACCGAATTATGTCAAGAAAAGCTGCAAGAATGTTGGGATTCATACCTTGGCCACCCCCTCTAGTGGCCGCTAATTGCGCCGTCACTGCGAAGGGAACACTGTACAGAACCTGCATCGCGCAAATTTTCAGACAGTTCATCAGGATAAGGCATTCTTGAGGAAATAATTTTTTTTAGCAATGTGTTTAAGTTGAAGTGTCAGTGATTCTTACGGCGAGAGGGACTCCAAGAAACGCAAAGAGGACGAGGCAGACAGCCTTGATGCTCTTGTCTGCAGTGATGGCTTTCTGAACAGTTCCATGGAAGTCCTTGAGTGACCAGAAGCTGATCAGTGCAGTTGCAGCCATGGCGATGCAGACGAGGAAATTGCTCGTCACCCACACCACCCTTGGCCCGACTTTCCGGCACATTGGTTCAATCAAGAATGAGCTGAATCCTAGCACAATCTACACGATCAGAAGCCCATGGTTAGTTGCTGCCAAAGAACATGGCTCGAGTGTTAAAGATTTGACAGTAGTTGTGGCAATCAGAATTCAGAAACCAATCAGATCTTACCGAATTCAGTAGCAGGCCAAATGCACCTGCCCTGACACCCTGGTTGAAAGCCTCGATCTGAGGATCAGTTCCCTTTGGGTCACCGTGGTAGATCTCACGGCCCATCCAGTCAGTGTCGTAGAGGATGAATGGGAACCAAGACAACTACAAGGACAATCATATCATAGAAAAGGTAAGGTACTATAAGATATAACTAAGATATGATCTAGTAGCATTTTTTTCAGTAATCTGAAAAGTTCTTTTTCTGATGTATATTGCATACCCAGGTAAGGCCAGTCACAATAAGCACAGAAGGCATCCCAGTAGGTAAGTTCCTGAAGCCTTTCAACACTGCTAGTGGACCAGTGCCTTCAGGCTCAGCTGGCTCGTTTGATTTTGTTGGGAGGGCTGCATTTCCTTTGAATGGAACTTCCTTGGCAAATATCAGAGTTATAACCAAGCACAGGGACAGGAAAATCTGAAAACAGGGGACAATGACCAAACAAGAGCATGTTAGGCTGTGAAAAAAAGCAACCAATATGACAGGGTTGAAAAAAGAGGAACAGCAATACAATATGTAAGTTAAATTACTCATACTCGCTAAAATATTTTCAGTATAGTACTATCTTATTACAAAGACTAATATTAGCACATTGTTAAAGTATTATCAGCAGGCAGTTTATGAGGTAATAGCAGAACTTACCACAGCCACCAGAAATGCACCTTTCAAATTTGCACAAGCTTCACAGCAAGCTCTTGTTTTAAGGAATGGAAACCACCTGCGCAATTAATTAGGGAGAATGCAACTCAATACTTGTAAACAAATTTCACCTTCTCTACTAATGTATATGAATTTCACTTGCCTTCTTTCAGAAAAGAATGCAACTGAATAGACTGTGCTAAACAGAAAATCTGTATGAAACTGATACATAAGAGTAACTTACTTGTGCCAATTGTTTGTGGAACCAGAGGAGTATCCTAGGATGTTTCCCATTGCCATCCAAGAACAGAAGATGGAGTTAGCTGTGCCAGGTCCATGACGTCCTACAGAACGAAAATTAGGAGATCAAATCCAAAATCCCACTGATACCAGAAGCCCAGAACACAAGGGCAACTTTCTTTTTTCTGGAATCAATCAAGTGTTAGTGAACTGTGGAAACCAATAAAAATTTGGTAGTTAACTCTGAAAGACAAGGCTATGAAAAATTACCTGATAAATCAGCCATTAGAGCACGTGCTGGACCCTAGAAATTGCATTGCAAAATTAAGATTTTTGTTATGATTCTTTGTACAAATTTCTTTAACATGATTATTATATAGTAGGCACTAACCTGCACAGTGTTGTTGGAAAAATCAAGAAGCCAGAATCCCAGGACATATACAATAGCAGCATGCCACCGTGATCCATGGTAGACACTGCATTACATGGTGTATCAGATAACTGTTATCTGCTAATTATGATACGCAAAATGTTCAGTTACCTGCAGTCTTCCTTTGTATCACCCATGGCGTATCCAATGTCAGCTGAAAATCCAATAACTACGACCTACATACATAAAGTGCAATGTCAATATGAGAGAAAATTTGGGGACTTCAACTTAAGGAATAAGAGTTCAAGGTTCAGTGGTTCTTACAGCCAAGCATATCAACACACATCCTGTAAGAATATATGGCCTCCGTCTTCCCCATTTTGAGGTGCACCTATCACTGTATAGACCCACGCATGGTTGAACCTGCAGGATTGGGAGATGATAATGGATCAAGAATTAAAAAAAATATGACTTGTACACAAACATTTTTTATGAAAGCTGATGAATTATGACAGTATGATCTACATTACACATATCAGAAGCTACAGAAAATGCAGCTTCAAACTTTTGTTGTAGTGAAGACACTAAAGTAACTTGAATTTACATTGCAGAAAGTACAGATTCCATAACATGAATTAATTTGATTTATTTTTTTTTAAAAGAGGGCAAAAGCTTTGTCTCGTATATATCGATAGAGCAGATAATTTGGTATTGTTACTTACCACCATGCCAGCAATAGGACCACAGAGCCACATGAATGAAGTAAGAGCATGCGACAGTCCGAGTGTCTGTAAATAACAGAGGTTAGAAAATCAGTTGTTTTGGCTTATAAAAAAACTTTGACTGTAATCTACTCTGACAATAGATGATCATGCTTCATTCCTTAAAAAAATGACTATGTTTGTTGAGTTTGCTGTGTCAACAAGATCTGCATCACTGTGGAAGATATTCAGAAACATCAGAGAGCGTGTACCAGTTGCAAAGAGTGAACACATATTGATTACCACACAATAAATTTTCCCAGAAATTTAGCAGATGAAATATCCCCAGCTCTGTTGGTCTGTTGGTTCCAGGATGCATTGCCTTGCATGCTACAACTAACAGCTATCTATCCAATAACTTCAGATCACACTTCTCTTTCCCCCATGGCATGAATAAACATACAAAGACTGTTCATCGTTCTATATATGTTCAGTCACTAAATTTATTTCACTTGTCAAATATAAGAAGAAGAATCTTAATAGTTAAAATGGCAATGCTTGGATGCTAACATAGCACCAACAGGCTATGGGTACATGATGATCTGCCCTCATTTGCCTATGCAATTGCTCTGTTGCAACTGTGCCACAGTCCACAGGACATATATATCTGACCTAGAATTTCCTTGTTTTACCCCTTTATTTTTCATGTGCGCGGTTAAAGTGGGTTGGAGTTGCCTCTACAGCAACCATCTTTATGGCACTTGGCTCGAGAAGGCTAAGGTAAGGATAAACTTCGCCAGAAATACTTCAATACAACAGTAGGTAGCTAGACTTGATGCATGGACCATCAGGGGTGATGAACTGCATATAATGTTCTACAGAAAAAGTACAGAACATTTTGGAACACTTTGTTAATTAGTATGGACTGATACAAAGAGGAAGTGAGGAGCTGTTTATTCCTGTCCCCTGCTGTTTTTTGGTTTTCCCTGTACAGACCCTTTTTATTCCCCTTAATACAAAAGTGCGCTCCTTACGTATTTCCGAAAAAAAAGGAGCTGTTTATCTCCGCTATAAATCCTTCAAATAAACGCCTGGAAGGACTGAGATTTAAGTTTAACCACTAAGAAGATCGTCTTTGTTTAGAATATTTGACGACAGAGAGGCAAATAACCAATACTCTATCTCTCCGGTAATAAATATTTGATGCTTACGATAAAATTCGGTCAAAATTTTAAATTTCTGACCATTAATTTTGTACTATAGTAAAGTTATAAAATCGCTCCACTTGCTCTGTCTTAAAATAAAAGTGATGTTTTTCATGGAGACTAGGCTGTGTTCTTTTGTAATGATTGAGAACCCTTTCTCCCGGTACACAAAATTGAGCGGTAGTTTAGCACATAATTAATTAAATATTAGCTAAAAAGACAAAAAAAATATTAATATGTTTTTTAAACCATATAAATATTTGGTAGAAACACATCGTTTGGCAGTTTAGGAAATATGTGTACGTCAAACGAAGGGAGTAGAAGTTAGGAAATGGAAGAAAAAAACACATCTTAAGGAGGGAGATGAAGCTAAATGAAGGATGATTTATATATCTAGCAGTAAGAATATTAGTTTCATCTTGCGGTTAGTATGGAATAGAGGGGAGGGACCCGTCATCTGCCTACCTTTAACTGCGCGCGGAGGAACGACAGATTAATTCTCCATTATTACCGCTCACTTTTGCCCTTGTCTGCTTATTTTTGTTTGCATCTCTAGCTATTAGTAGCTATTAACCTAATACGTGGTTATTACAAGAAGGATAAGGTGAGTTGGAGCAGATGTATATTTTTTTATGGCACTGTACAGCATCTGAGGTAAAATGGAATTTTAAAAAAAGGAGTGTCATATCTGAGATAAAACGGAATCAAACAGTCTAATTGAGGTAAAATGGAATCAAACAAGGAGTTGAGAAACGTGTCAAGCGTAAAATGAATCTCGGTACAGTAGACCGGTACTGATGCTAAGTGTCATGCTGGCTAGCCTGATTGATCCAAAGTGCACAAAAAGAACTTATAAAAGATTTTGATTCTTATATAGGTATACAGATTCTTCAGAAAAGAGGCAGAAAACGCCGACGTTTCATAGAGGAATCGAGAGGATATGAATCCTCTAGTGACAACAAAAAGAAAAAGGAAAAAAAAAGGAAAGGAAAAGGAATAACTACAAAATGACAAAAATGATAGCTAGTGCATCAAATGCATATTTGGCCACATGTATATAAACACATGAGCAAAAAAAATTACAAAAGGCATGCAGATTGAATTTATTACGGTACTTTTAGACACTAGTCAAATCTACCGTTCAAACAAAAAAAAATAAATCTCTCCCCACACATGAAGAAAAATTCCCCAATCTTTCAAGATATATATATTTTTTTTAACGACTCACACCAGACAGTACGAAGTTAATATTGATAAAGCAGAAAAAAATTACAAGATTACAACCTTGAAAAGATTGTAACCAGGACATATATAATCTACTACCATGAAACCTTGCAGATTAGAACAGCTAGCACGAGCAAAAACTCGCGAACAAAATCAAATCCACACGTGAGATACTTGTATATATTTTTTGCAGGATTATTCAGAGTTTCAGATGCATGCATGAGAGTGTGCAAAATACACAGGAGTACAGTATATATATATATATACCTGGACGTAGGGGGTGAGGAGGGAGAGCTGGAGCGCCCACCCGTACTGCACGCCGCCGGCGACCATCCCGGAGAGGATGAGCCTCCCGAGGCTGATCGGCGCCGCCGTCTCCACCGCCGCCGCCGCCTCACCGCCTCCCCCACCACGCGCGCCGCCGCCGCCGCCGACCCCGACCGACAGCTCCAGCCCCCCGCCACCACCGCCGCCGCCTCCTCCGGCCCCGCTGCCGCGAGCCATGGCGGACGCGCCACGCACAAACACAAACCTGCACACCCCTGTGTCAGAGGAGGAGAGGCCAAGAAAGGAAATCGAGTGGAGGAAGTGAGGAGCGGCGGAGACGTAGGAGGAGGAGGGGGAGATGGAAATGGAAAGCCGCGCGAGAGAGGAGGCGCGTGCTGGATGGGAGGAGGAGGAGGAGGTGGTGGGTTTGTGTTT
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| CDS seq | ATGGCTCGCGGCAGCGGGGCCGGAGGAGGCGGCGGCGGTGGTGGCGGGGGGCTGGAGCTGTCGGTCGGGGTCGGCGGCGGCGGCGGCGCGCGTGGTGGGGGAGGCGGTGAGGCGGCGGCGGCGGTGGAGACGGCGGCGCCGATCAGCCTCGGGAGGCTCATCCTCTCCGGGATGGTCGCCGGCGGCGTGCAGTACGGGTGGGCGCTCCAGCTCTCCCTCCTCACCCCCTACGTCCAGACACTCGGACTGTCGCATGCTCTTACTTCATTCATGTGGCTCTGTGGTCCTATTGCTGGCATGGTGGTTCAACCATGCGTGGGTCTATACAGTGATAGGTGCACCTCAAAATGGGGAAGACGGAGGCCATATATTCTTACAGGATGTGTGTTGATATGCTTGGCTGTCGTAGTTATTGGATTTTCAGCTGACATTGGATACGCCATGGGTGATACAAAGGAAGACTGCAGTGTCTACCATGGATCACGGTGGCATGCTGCTATTGTATATGTCCTGGGATTCTGGCTTCTTGATTTTTCCAACAACACTGTGCAGGGTCCAGCACGTGCTCTAATGGCTGATTTATCAGGACGTCATGGACCTGGCACAGCTAACTCCATCTTCTGTTCTTGGATGGCAATGGGAAACATCCTAGGATACTCCTCTGGTTCCACAAACAATTGGCACAAGTGGTTTCCATTCCTTAAAACAAGAGCTTGCTGTGAAGCTTGTGCAAATTTGAAAGGTGCATTTCTGGTGGCTGTGATTTTCCTGTCCCTGTGCTTGGTTATAACTCTGATATTTGCCAAGGAAGTTCCATTCAAAGGAAATGCAGCCCTCCCAACAAAATCAAACGAGCCAGCTGAGCCTGAAGGCACTGGTCCACTAGCAGTGTTGAAAGGCTTCAGGAACTTACCTACTGGGATGCCTTCTGTGCTTATTGTGACTGGCCTTACCTGGTTGTCTTGGTTCCCATTCATCCTCTACGACACTGACTGGATGGGCCGTGAGATCTACCACGGTGACCCAAAGGGAACTGATCCTCAGATCGAGGCTTTCAACCAGGGTGTCAGGGCAGGTGCATTTGGCCTGCTACTGAATTCGATTGTGCTAGGATTCAGCTCATTCTTGATTGAACCAATGTGCCGGAAAGTCGGGCCAAGGGTGGTGTGGGTGACGAGCAATTTCCTCGTCTGCATCGCCATGGCTGCAACTGCACTGATCAGCTTCTGGTCACTCAAGGACTTCCATGGAACTGTTCAGAAAGCCATCACTGCAGACAAGAGCATCAAGGCTGTCTGCCTCGTCCTCTTTGCGTTTCTTGGAGTCCCTCTCGCCGTTCTGTACAGTGTTCCCTTCGCAGTGACGGCGCAATTAGCGGCCACTAGAGGGGGTGGCCAAGGTATGAATCCCAACATTCTTGCAGCTTTTCTTGACATAATTCGGTGTTGTTTGGATGCTGGTCTAATCCATGGCGATCTGCAGGGCTCTGCACCGGCGTCCTCAACATCTCCATCGTCATCCCTCAGGTGGTCATCGCGCTGGGAGCCGGGCCGTGGGACGAGCTGTTCGGGAAGGGGAACATCCCGGCGTTCGGCCTCGCCTCGGGATTCGCGCTCATCGGCGGCGTCGCCGGAATATTCCTGCTGCCCAAGATCTCCAAGCGCCAGTTCCGGTCGGTCAGCATGGGCGGCGGTCACTGACCGCCCCGCTCTCGCCGCCGGCTGCGGCGGCGGCGGCGGCCGGAGCAGCGCCGCCGGAAGTGGTGAGCTTTGTAGTTCTCGTTTGCAATGGATCAAAGGCGCCCCCTCTTTTTTTTTACATAGGGTAATTAATTAA
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| Protein seq | MARGSGAGGGGGGGGGGLELSVGVGGGGGARGGGGGEAAAAVETAAPISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVGLYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSSGSTNNWHKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPTKSNEPAEPEGTGPLAVLKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAMAATALISFWSLKDFHGTVQKAITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAATRGGGQGMNPNILAAFLDIIRCCLDAGLIHGDLQGSAPASSTSPSSSLRWSSRWEPGRGTSCSGRGTSRRSASPRDSRSSAASPEYSCCPRSPSASSGRSAWAAVTDRPALAAGCGGGGGRSSAAGSGELCSSRLQWIKGAPSFFLHRVIN |
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| Function | Sucrose transport protein SUT1 [UniProtKB/Swiss-Prot:Q10R54] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_03g0005230 | OsIR64_03g0005230.04 | Chr03 | 3830246 | 3836630 | - | NAM | ||
| CDS seq | ATGGCTCGCGGCAGCGGGGCCGGAGGAGGCGGCGGCGGTGGTGGCGGGGGGCTGGAGCTGTCGGTCGGGGTCGGCGGCGGCGGCGGCGCGCGTGGTGGGGGAGGCGGTGAGGCGGCGGCGGCGGTGGAGACGGCGGCGCCGATCAGCCTCGGGAGGCTCATCCTCTCCGGGATGGTCGCCGGCGGCGTGCAGTACGGGTGGGCGCTCCAGCTCTCCCTCCTCACCCCCTACGTCCAGACACTCGGACTGTCGCATGCTCTTACTTCATTCATGTGGCTCTGTGGTCCTATTGCTGGCATGGTGGTTCAACCATGCGTGGGTCTATACAGTGATAGGTGCACCTCAAAATGGGGAAGACGGAGGCCATATATTCTTACAGGATGTGTGTTGATATGCTTGGCTGTCGTAGTTATTGGATTTTCAGCTGACATTGGATACGCCATGGGTGATACAAAGGAAGACTGCAGTGTCTACCATGGATCACGGTGGCATGCTGCTATTGTATATGTCCTGGGATTCTGGCTTCTTGATTTTTCCAACAACACTGTGCAGGGTCCAGCACGTGCTCTAATGGCTGATTTATCAGGACGTCATGGACCTGGCACAGCTAACTCCATCTTCTGTTCTTGGATGGCAATGGGAAACATCCTAGGATACTCCTCTGGTTCCACAAACAATTGGCACAAGTGGTTTCCATTCCTTAAAACAAGAGCTTGCTGTGAAGCTTGTGCAAATTTGAAAGGTGCATTTCTGGTGGCTGTGATTTTCCTGTCCCTGTGCTTGGTTATAACTCTGATATTTGCCAAGGAAGTTCCATTCAAAGGAAATGCAGCCCTCCCAACAAAATCAAACGAGCCAGCTGAGCCTGAAGGCACTGGTCCACTAGCAGTGTTGAAAGGCTTCAGGAACTTACCTACTGGGATGCCTTCTGTGCTTATTGTGACTGGCCTTACCTGGTTGTCTTGGTTCCCATTCATCCTCTACGACACTGACTGGATGGGCCGTGAGATCTACCACGGTGACCCAAAGGGAACTGATCCTCAGATCGAGGCTTTCAACCAGGGTGTCAGGGCAGGTGCATTTGGCCTGCTACTGAATTCGATTGTGCTAGGATTCAGCTCATTCTTGATTGAACCAATGTGCCGGAAAGTCGGGCCAAGGGTGGTGTGGGTGACGAGCAATTTCCTCGTCTGCATCGCCATGGCTGCAACTGCACTGATCAGCTTCTGGTCACTCAAGGACTTCCATGGAACTGTTCAGAAAGCCATCACTGCAGACAAGAGCATCAAGGCTGTCTGCCTCGTCCTCTTTGCGTTTCTTGGAGTCCCTCTCGCCGTAAGAATCACTGACACTTCAACTTAA
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| Protein seq | MARGSGAGGGGGGGGGGLELSVGVGGGGGARGGGGGEAAAAVETAAPISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVGLYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSSGSTNNWHKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPTKSNEPAEPEGTGPLAVLKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAMAATALISFWSLKDFHGTVQKAITADKSIKAVCLVLFAFLGVPLAVRITDTST
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_03g0005230 | OsIR64_03g0005230.01 | Chr03 | 3830246 | 3836630 | - | NAM | ||
| CDS seq | ATGGCTCGCGGCAGCGGGGCCGGAGGAGGCGGCGGCGGTGGTGGCGGGGGGCTGGAGCTGTCGGTCGGGGTCGGCGGCGGCGGCGGCGCGCGTGGTGGGGGAGGCGGTGAGGCGGCGGCGGCGGTGGAGACGGCGGCGCCGATCAGCCTCGGGAGGCTCATCCTCTCCGGGATGGTCGCCGGCGGCGTGCAGTACGGGTGGGCGCTCCAGCTCTCCCTCCTCACCCCCTACGTCCAGACACTCGGACTGTCGCATGCTCTTACTTCATTCATGTGGCTCTGTGGTCCTATTGCTGGCATGGTGGTTCAACCATGCGTGGGTCTATACAGTGATAGGTGCACCTCAAAATGGGGAAGACGGAGGCCATATATTCTTACAGGATGTGTGTTGATATGCTTGGCTGTCGTAGTTATTGGATTTTCAGCTGACATTGGATACGCCATGGGTGATACAAAGGAAGACTGCAGTGTCTACCATGGATCACGGTGGCATGCTGCTATTGTATATGTCCTGGGATTCTGGCTTCTTGATTTTTCCAACAACACTGTGCAGGGTCCAGCACGTGCTCTAATGGCTGATTTATCAGGACGTCATGGACCTGGCACAGCTAACTCCATCTTCTGTTCTTGGATGGCAATGGGAAACATCCTAGGATACTCCTCTGGTTCCACAAACAATTGGCACAAGTGGTTTCCATTCCTTAAAACAAGAGCTTGCTGTGAAGCTTGTGCAAATTTGAAAGGTGCATTTCTGGTGGCTGTGATTTTCCTGTCCCTGTGCTTGGTTATAACTCTGATATTTGCCAAGGAAGTTCCATTCAAAGGAAATGCAGCCCTCCCAACAAAATCAAACGAGCCAGCTGAGCCTGAAGGCACTGGTCCACTAGCAGTGTTGAAAGGCTTCAGGAACTTACCTACTGGGATGCCTTCTGTGCTTATTGTGACTGGCCTTACCTGGTTGTCTTGGTTCCCATTCATCCTCTACGACACTGACTGGATGGGCCGTGAGATCTACCACGGTGACCCAAAGGGAACTGATCCTCAGATCGAGGCTTTCAACCAGGGTGTCAGGGCAGGTGCATTTGGCCTGCTACTGAATTCGATTGTGCTAGGATTCAGCTCATTCTTGATTGAACCAATGTGCCGGAAAGTCGGGCCAAGGGTGGTGTGGGTGACGAGCAATTTCCTCGTCTGCATCGCCATGGCTGCAACTGCACTGATCAGCTTCTGGTCACTCAAGGACTTCCATGGAACTGTTCAGAAAGCCATCACTGCAGACAAGAGCATCAAGGCTGTCTGCCTCGTCCTCTTTGCGTTTCTTGGAGTCCCTCTCGCCGTTCTGTACAGTGTTCCCTTCGCAGTGACGGCGCAATTAGCGGCCACTAGAGGGGGTGGCCAAGGGCTCTGCACCGGCGTCCTCAACATCTCCATCGTCATCCCTCAGGTTAATTAG
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| Protein seq | MARGSGAGGGGGGGGGGLELSVGVGGGGGARGGGGGEAAAAVETAAPISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVGLYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSSGSTNNWHKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPTKSNEPAEPEGTGPLAVLKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAMAATALISFWSLKDFHGTVQKAITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAATRGGGQGLCTGVLNISIVIPQVN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_03g0005230 | OsIR64_03g0005230.02 | Chr03 | 3830246 | 3836630 | - | NAM | ||
| CDS seq | ATGGCTCGCGGCAGCGGGGCCGGAGGAGGCGGCGGCGGTGGTGGCGGGGGGCTGGAGCTGTCGGTCGGGGTCGGCGGCGGCGGCGGCGCGCGTGGTGGGGGAGGCGGTGAGGCGGCGGCGGCGGTGGAGACGGCGGCGCCGATCAGCCTCGGGAGGCTCATCCTCTCCGGGATGGTCGCCGGCGGCGTGCAGTACGGGTGGGCGCTCCAGCTCTCCCTCCTCACCCCCTACGTCCAGACACTCGGACTGTCGCATGCTCTTACTTCATTCATGTGGCTCTGTGGTCCTATTGCTGGCATGGTGGTTCAACCATGCGTGGGTCTATACAGTGATAGGTGCACCTCAAAATGGGGAAGACGGAGGCCATATATTCTTACAGGATGTGTGTTGATATGCTTGGCTGTCGTAGTTATTGGATTTTCAGCTGACATTGGATACGCCATGGGTGATACAAAGGAAGACTGCAGTGTCTACCATGGATCACGGTGGCATGCTGCTATTGTATATGTCCTGGGATTCTGGCTTCTTGATTTTTCCAACAACACTGTGCAGGGTCCAGCACGTGCTCTAATGGCTGATTTATCAGGACGTCATGGACCTGGCACAGCTAACTCCATCTTCTGTTCTTGGATGGCAATGGGAAACATCCTAGGATACTCCTCTGGTTCCACAAACAATTGGCACAAGTGGTTTCCATTCCTTAAAACAAGAGCTTGCTGTGAAGCTTGTGCAAATTTGAAAGGTGCATTTCTGGTGGCTGTGATTTTCCTGTCCCTGTGCTTGGTTATAACTCTGATATTTGCCAAGGAAGTTCCATTCAAAGGAAATGCAGCCCTCCCAACAAAATCAAACGAGCCAGCTGAGCCTGAAGGCACTGGTCCACTAGCAGTGTTGAAAGGCTTCAGGAACTTACCTACTGGGATGCCTTCTGTGCTTATTGTGACTGGCCTTACCTGGTTGTCTTGGTTCCCATTCATCCTCTACGACACTGACTGGATGGGCCGTGAGATCTACCACGGTGACCCAAAGGGAACTGATCCTCAGATCGAGGCTTTCAACCAGGGTGTCAGGGCAGGTGCATTTGGCCTGCTACTGAATTCGATTGTGCTAGGATTCAGCTCATTCTTGATTGAACCAATGTGCCGGAAAGTCGGGCCAAGGGTGGTGTGGGTGACGAGCAATTTCCTCGTCTGCATCGCCATGGCTGCAACTGCACTGATCAGCTTCTGGTCACTCAAGGACTTCCATGGAACTGTTCAGAAAGCCATCACTGCAGACAAGAGCATCAAGGCTGTCTGCCTCGTCCTCTTTGCGTTTCTTGGAGTCCCTCTCGCCGTTCTGTACAGTGTTCCCTTCGCAGTGACGGCGCAATTAGCGGCCACTAGAGGGGGTGGCCAAGGGCTCTGCACCGGCGTCCTCAACATCTCCATCGTCATCCCTCAGGTGGTCATCGCGCTGGGAGCCGGGCCGTGGGACGAGCTGTTCGGGAAGGGGAACATCCCGGCGTTCGGCCTCGCCTCGGGATTCGCGCTCATCGGCGGCGTCGCCGGAATATTCCTGCTGCCCAAGATCTCCAAGCGCCAGTTCCGGTCGGTCAGCATGGGCGGCGGTCACTGA
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| Protein seq | MARGSGAGGGGGGGGGGLELSVGVGGGGGARGGGGGEAAAAVETAAPISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVGLYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSSGSTNNWHKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPTKSNEPAEPEGTGPLAVLKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAMAATALISFWSLKDFHGTVQKAITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAATRGGGQGLCTGVLNISIVIPQVVIALGAGPWDELFGKGNIPAFGLASGFALIGGVAGIFLLPKISKRQFRSVSMGGGH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_03g0005230 | OsIR64_03g0005230.03 | Chr03 | 3830246 | 3836630 | - | NAM | ||
| CDS seq | ATGGCTCGCGGCAGCGGGGCCGGAGGAGGCGGCGGCGGTGGTGGCGGGGGGCTGGAGCTGTCGGTCGGGGTCGGCGGCGGCGGCGGCGCGCGTGGTGGGGGAGGCGGTGAGGCGGCGGCGGCGGTGGAGACGGCGGCGCCGATCAGCCTCGGGAGGCTCATCCTCTCCGGGATGGTCGCCGGCGGCGTGCAGTACGGGTGGGCGCTCCAGCTCTCCCTCCTCACCCCCTACGTCCAGACACTCGGACTGTCGCATGCTCTTACTTCATTCATGTGGCTCTGTGGTCCTATTGCTGGCATGGTGGTTCAACCATGCGTGGGTCTATACAGTGATAGGTGCACCTCAAAATGGGGAAGACGGAGGCCATATATTCTTACAGGATGTGTGTTGATATGCTTGGCTGTCGTAGTTATTGGATTTTCAGCTGACATTGGATACGCCATGGGTGATACAAAGGAAGACTGCAGTGTCTACCATGGATCACGGTGGCATGCTGCTATTGTATATGTCCTGGGATTCTGGCTTCTTGATTTTTCCAACAACACTGTGCAGGGTCCAGCACGTGCTCTAATGGCTGATTTATCAGGACGTCATGGACCTGGCACAGCTAACTCCATCTTCTGTTCTTGGATGGCAATGGGAAACATCCTAGGATACTCCTCTGGTTCCACAAACAATTGGCACAAGTGGTTTCCATTCCTTAAAACAAGAGCTTGCTGTGAAGCTTGTGCAAATTTGAAAGGTGCATTTCTGGTGGCTGTGATTTTCCTGTCCCTGTGCTTGGTTATAACTCTGATATTTGCCAAGGAAGTTCCATTCAAAGGAAATGCAGCCCTCCCAACAAAATCAAACGAGCCAGCTGAGCCTGAAGGCACTGGTCCACTAGCAGTGTTGAAAGGCTTCAGGAACTTACCTACTGGGATGCCTTCTGTGCTTATTGTGACTGGCCTTACCTGGTTGTCTTGGTTCCCATTCATCCTCTACGACACTGACTGGATGGGCCGTGAGATCTACCACGGTGACCCAAAGGGAACTGATCCTCAGATCGAGGCTTTCAACCAGGGTGTCAGGGCAGGTGCATTTGGCCTGCTACTGAATTCGATTGTGCTAGGATTCAGCTCATTCTTGATTGAACCAATGTGCCGGAAAGTCGGGCCAAGGGTGGTGTGGGTGACGAGCAATTTCCTCGTCTGCATCGCCATGGCTGCAACTGCACTGATCAGCTTCTGGTCACTCAAGGACTTCCATGGAACTGTTCAGAAAGCCATCACTGCAGACAAGAGCATCAAGGCTGTCTGCCTCGTCCTCTTTGCGTTTCTTGGAGTCCCTCTCGCCGTTCTGTACAGTGTTCCCTTCGCAGTGACGGCGCAATTAGCGGCCACTAGAGGGGGTGGCCAAGGTATGAATCCCAACATTCTTGCAGCTTTTCTTGACATAATTCGGTGTTGTTTGGATGCTGGTCTAATCCATGGCGATCTGCAGGGCTCTGCACCGGCGTCCTCAACATCTCCATCGTCATCCCTCAGGTGGTCATCGCGCTGGGAGCCGGGCCGTGGGACGAGCTGTTCGGGAAGGGGAACATCCCGGCGTTCGGCCTCGCCTCGGGATTCGCGCTCATCGGCGGCGTCGCCGGAATATTCCTGCTGCCCAAGATCTCCAAGCGCCAGTTCCGGTCGGTCAGCATGGGCGGCGGTCACTGACCGCCCCGCTCTCGCCGCCGGCTGCGGCGGCGGCGGCGGCCGGAGCAGCGCCGCCGGAAGTGGTGAGCTTTGTAGTTCTCGTTTGCAATGGATCAAAGGCGCCCCCTCTTTTTTTTTACATAGGGTAATTAATTAA
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| Protein seq | MARGSGAGGGGGGGGGGLELSVGVGGGGGARGGGGGEAAAAVETAAPISLGRLILSGMVAGGVQYGWALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVGLYSDRCTSKWGRRRPYILTGCVLICLAVVVIGFSADIGYAMGDTKEDCSVYHGSRWHAAIVYVLGFWLLDFSNNTVQGPARALMADLSGRHGPGTANSIFCSWMAMGNILGYSSGSTNNWHKWFPFLKTRACCEACANLKGAFLVAVIFLSLCLVITLIFAKEVPFKGNAALPTKSNEPAEPEGTGPLAVLKGFRNLPTGMPSVLIVTGLTWLSWFPFILYDTDWMGREIYHGDPKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSSFLIEPMCRKVGPRVVWVTSNFLVCIAMAATALISFWSLKDFHGTVQKAITADKSIKAVCLVLFAFLGVPLAVLYSVPFAVTAQLAATRGGGQGMNPNILAAFLDIIRCCLDAGLIHGDLQGSAPASSTSPSSSLRWSSRWEPGRGTSCSGRGTSRRSASPRDSRSSAASPEYSCCPRSPSASSGRSAWAAVTDRPALAAGCGGGGGRSSAAGSGELCSSRLQWIKGAPSFFLHRVIN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr03 | 3830246 | 3830917 | - | OsIR64_03g0005230.01 | OsIR64_03g0005230.02,OsIR64_03g0005230.01 | All |
| RI | Chr03 | 3830874 | 3831064 | - | OsIR64_03g0005230.03 | OsIR64_03g0005230.02,OsIR64_03g0005230.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.434067 | 0.116222 | 4.941743 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0170900 | RBH | 2.364049 | 3.697393 | 11.260689 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g07480 | RBH | 1.344213 | 1.815455 | 2.654447 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0170900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0005410 | RBH | 2.292840 | 0.0 | 18.656157 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0005340 | RBH | 1.802640 | 0.0 | 11.157261 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0005380 | RBH | 1.763481 | 0.000000 | 19.310312 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0005320 | RBH | 0.297282 | 0.047955 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0005340 | RBH | 17.336269 | 0.000000 | 59.493740 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0061300 | RBH | 8.7961135 | 3.3794995 | 3.1589425 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0010100 | RBH | 0.0 | 0.0 | 2.222610 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0061500 | RBH | 7.1323575 | 3.6940805 | 0.952008 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0005320 | RBH | 0.233709 | 0.049515 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0005320 | RBH | 2.033421 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0005280 | RBH | 18.523932 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0005320 | RBH | 1.990205 | 0.467984 | 5.889742 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0005300 | RBH | 0.328220 | 0.564604 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G005310 | RBH | 0.858022 | 0.0 | 7.536241 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0005150 | RBH | 5.303975 | 5.787973 | 21.535820 |
