Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_02g0028320 | OGI:02077910 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr02:28812641-28813426 | ||||||||
| Gene Symbol | ERF20, OsERF#020, OsERF020, OsERF20, AP2/EREBP#126, AP2/EREBP126, OsDREB1G | ||||||||||
| DNA seq | ATGGCTGACCTGACCGAGCATCCGTCGCCGACTGCTCCTCCTCAAGTGCAAACAGCTGGCCTGCCGGTGGCGGCTTCTCCGGGTCCTGCCTCGCCTCATTCACCGTCGGAGCAAGGGGACAAGACGGCGCCCGGGGCAGCCACGGCGTCGACGATGACGACGGCGAGCTCGGGCGAGCCGTCGCCACGGTCCTCGGGGAAGCACGCCTTCTACCGGGGCATCCGGTGCAGGAGCGGCAAATGGGTCTCGGAGATCCGCGAGCCGCGCAAGGCGCGCCGCATATGGCTCGGGACGTACCCGACCGCCGAGATGGCCGCCGCGGCCTACGACGTGGCCGCGCGCGCGCTCCGCGGTGCCGACGCGGTGCTCAATTTCCCGGACGCCACCGCCTCCCGCCCTGTCCCGGCGTCCGCATCCCCGGCCGACATACGCGCCGCGGCGGCCGCAGCAGCCGCGGCCGCCGCGCACCTTGAGCGGCCGCACGGCCCCACCGGCACTGCCTATCCTGCCACCGCCGCAGCGGAGCACCACCAGCAGCAGCAGCAGCAACAGTACGGCAGTGGCAGTCCGGCCGCCGACGACGTCTCAGGCTACCCGCCGATGGAGGGAGGGATTGGCAATGACGATTTCATGGACGAAGAAGCCATCTTCGAGCTGCCTCAGCTGCTGCGCAACATGGCGGCTGGCATGATGATGAGCCCGCCGAGGCTGAGCCCCACCACCTCCGACGTGTCGCCGGAGCCGTCGGAGGCCGGCGAGAGCCTGTGGAGCTACCGTGATCCCTAG
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| CDS seq | ATGGCTGACCTGACCGAGCATCCGTCGCCGACTGCTCCTCCTCAAGTGCAAACAGCTGGCCTGCCGGTGGCGGCTTCTCCGGGTCCTGCCTCGCCTCATTCACCGTCGGAGCAAGGGGACAAGACGGCGCCCGGGGCAGCCACGGCGTCGACGATGACGACGGCGAGCTCGGGCGAGCCGTCGCCACGGTCCTCGGGGAAGCACGCCTTCTACCGGGGCATCCGGTGCAGGAGCGGCAAATGGGTCTCGGAGATCCGCGAGCCGCGCAAGGCGCGCCGCATATGGCTCGGGACGTACCCGACCGCCGAGATGGCCGCCGCGGCCTACGACGTGGCCGCGCGCGCGCTCCGCGGTGCCGACGCGGTGCTCAATTTCCCGGACGCCACCGCCTCCCGCCCTGTCCCGGCGTCCGCATCCCCGGCCGACATACGCGCCGCGGCGGCCGCAGCAGCCGCGGCCGCCGCGCACCTTGAGCGGCCGCACGGCCCCACCGGCACTGCCTATCCTGCCACCGCCGCAGCGGAGCACCACCAGCAGCAGCAGCAGCAACAGTACGGCAGTGGCAGTCCGGCCGCCGACGACGTCTCAGGCTACCCGCCGATGGAGGGAGGGATTGGCAATGACGATTTCATGGACGAAGAAGCCATCTTCGAGCTGCCTCAGCTGCTGCGCAACATGGCGGCTGGCATGATGATGAGCCCGCCGAGGCTGAGCCCCACCACCTCCGACGTGTCGCCGGAGCCGTCGGAGGCCGGCGAGAGCCTGTGGAGCTACCGTGATCCCTAG
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| Protein seq | MADLTEHPSPTAPPQVQTAGLPVAASPGPASPHSPSEQGDKTAPGAATASTMTTASSGEPSPRSSGKHAFYRGIRCRSGKWVSEIREPRKARRIWLGTYPTAEMAAAAYDVAARALRGADAVLNFPDATASRPVPASASPADIRAAAAAAAAAAAHLERPHGPTGTAYPATAAAEHHQQQQQQQYGSGSPAADDVSGYPPMEGGIGNDDFMDEEAIFELPQLLRNMAAGMMMSPPRLSPTTSDVSPEPSEAGESLWSYRDP |
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| Function | Ethylene-responsive transcription factor ERF025 [UniProtKB/Swiss-Prot:Q9FJ90] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_02g0028320 | OsIR64_02g0028320.01 | Chr02 | 28812641 | 28813426 | + | NAM | ||
| CDS seq | ATGGCTGACCTGACCGAGCATCCGTCGCCGACTGCTCCTCCTCAAGTGCAAACAGCTGGCCTGCCGGTGGCGGCTTCTCCGGGTCCTGCCTCGCCTCATTCACCGTCGGAGCAAGGGGACAAGACGGCGCCCGGGGCAGCCACGGCGTCGACGATGACGACGGCGAGCTCGGGCGAGCCGTCGCCACGGTCCTCGGGGAAGCACGCCTTCTACCGGGGCATCCGGTGCAGGAGCGGCAAATGGGTCTCGGAGATCCGCGAGCCGCGCAAGGCGCGCCGCATATGGCTCGGGACGTACCCGACCGCCGAGATGGCCGCCGCGGCCTACGACGTGGCCGCGCGCGCGCTCCGCGGTGCCGACGCGGTGCTCAATTTCCCGGACGCCACCGCCTCCCGCCCTGTCCCGGCGTCCGCATCCCCGGCCGACATACGCGCCGCGGCGGCCGCAGCAGCCGCGGCCGCCGCGCACCTTGAGCGGCCGCACGGCCCCACCGGCACTGCCTATCCTGCCACCGCCGCAGCGGAGCACCACCAGCAGCAGCAGCAGCAACAGTACGGCAGTGGCAGTCCGGCCGCCGACGACGTCTCAGGCTACCCGCCGATGGAGGGAGGGATTGGCAATGACGATTTCATGGACGAAGAAGCCATCTTCGAGCTGCCTCAGCTGCTGCGCAACATGGCGGCTGGCATGATGATGAGCCCGCCGAGGCTGAGCCCCACCACCTCCGACGTGTCGCCGGAGCCGTCGGAGGCCGGCGAGAGCCTGTGGAGCTACCGTGATCCCTAG
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| Protein seq | MADLTEHPSPTAPPQVQTAGLPVAASPGPASPHSPSEQGDKTAPGAATASTMTTASSGEPSPRSSGKHAFYRGIRCRSGKWVSEIREPRKARRIWLGTYPTAEMAAAAYDVAARALRGADAVLNFPDATASRPVPASASPADIRAAAAAAAAAAAHLERPHGPTGTAYPATAAAEHHQQQQQQQYGSGSPAADDVSGYPPMEGGIGNDDFMDEEAIFELPQLLRNMAAGMMMSPPRLSPTTSDVSPEPSEAGESLWSYRDP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0676800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g45420 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0676800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0028850 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0028930 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0028800 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0028400 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0028510 | RBH | 0.0 | 2.662131 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0447600 | RBH | 0.3365795 | 34.1336315 | 0.3254095 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0022720 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0475700 | RBH | 0.5688985 | 18.2392435 | 0.3996235 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0028660 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0028370 | RBH | 0.0 | 2.023595 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0028660 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0028530 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0028220 | RBH | 0.0 | 0.882105 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G028800 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0028580 | RBH | 0.0 | 0.0 | 0.611737 |
