Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_02g0023430 | OGI:02067070 | 15/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr02:24620672-24624323 | ||||||||
| Gene Symbol | OsMSRPK1, Orysa;CDKG;1 | ||||||||||
| DNA seq | GACGCTCTGCGTGCCCGACTTGGCTTTCTCCTCCTCTCTCCTCCCGCAACCCGCGCACGATTCGGTTCCCCCTCTCCTCGCGGCCGCCTCTTCCCCCCTCGAATCCCGATAAGCAGAGGCGGAATTCTCCACCGCGGCAGCAACCTGCAACCCCCAGTTCGATTCGGCTGCGAGGTGAGGTCGTCCGATTCCCAATTCGGTCGGAATCACGCCCAATTTTTTGTCTCTACTAGGGTTTGGTTTCGGTCTGAGGATTTCTAGTTTGGTGGAGAATCGAGGTCCGATCCCCCAATCGGGTCGGAATCACGCCCAATTTTTGTCTCTATAGGGTTTGGTTTCGGTCCGAGGATTTCTAGTTTGGTGGAGAATTACCTCTGGGATTTTGCGGATTCGACGTCGGTTGCTAGGGTTTGTGAGGGGAGCGATTCATGGCTGCGGGGAGCCACGGGGGGTACAGGGGCTACGAGGTGGCGAGGGAGCGGGAGCATGACGTGGGGGTCTCTAGGAGGAGCAAGGAGCACTACCACCACCGCCACCCGAGCCGCCACCGCGACTCGGAACGCCGCCGTGACGGCGGGCGCAGCGGTGGCCGGGAGCTGTCGAATGGGTACAGCCACCGCCGGGATTCGCCGCGTCCACCACCGAGGAGGCGTCCATCGGAAGGGAGGACGGAGGACAGGGAGCCTGGCGAGGTCTCAGGCGGGAGTGGCTCAGAGAGGTCCGGTGAACGCCCAATGAAGACCAGGGAGCCGAGGGAGAATGGTGTCACGCGAGTCAGCAAGGAGGAGGCGAAGATGTCCCCGAGTAAGAAGAGGAAGCAATCTCCAGTAATTTGGGACAGGAATGGTTCACAGCGGCAGGCTCGAGACCCTGTGAGGGGCATTAGAGAGGTAGATGCTGTAGTTGCTGAGATTATTATGCATCAGTCGCATTCCTTGCCTGTCATGAGCTCACTGTCTAGCATAGGGGATGGACACTCGCCAATGATGTTGGATGTGTCAGTTGATAAGGTACAGGAGTATGAGAAGAACAGGATTGTGGATGAGGAGGAAGAGGGATACCCAACAATGAGAAACATTCTGACCTCAAGATGGGCAGATGCTGGCGACGAGGAGGAAAATGTGTTTGTGCCCAAGAAAAAGAAGAGCGTGTCACCTGTCGACTCGATTGAACGAGGGTCCACAAAAAAGGTTACAAGCCCTGAGTCTGGAGAGGTGCTGGTGTATAACTCAGTGAGAAGCTCCTCAAGGTCATCTGACTCGGGGGTATTACAGGGTAGTGCAAACCGGGACCTTGAAGTGGAGAAGGGTGACAACATAGATGTTGAGAAGGCGGCTGATGATGATTATCCTGCTGGTCATTTGCTGGATTCTGATTTTGAAGGTGAGGACTGTAGGTCTGAAACCCCTGAGTGTACACGGTCCCCACGTAGGTGCATTAACATGCTTCAAGGTTGTAGGAGCGTTGATGAGTTTGAAAGACTCAACACAATCAATGAGGGTACATATGGAGTTGTATTTAGGGTGAGGGATAAGAGAACTGGTGAGATTGTTGCGCTGAAGAAGGTCAAGATGGAGAAGGAAAGGGAAGGTTTCCCACTGACTTCTCTTAGGGAAATGAATATCTTGTTATCCTTCCACCACCCTTCGATTGTGGAAGTCAAGGAAGTAGTTGTTGGTAGTAATGACAGAGATATTTTCATGGTGATGGAGTACATGGAACATGATCTTAAGGGTGTTATGGAGACAATGAAACAACCGTATAGTCAAAGTGAGGTCAAATGCTTGATGCTTCAGCTATTAGAAGGTGTGAAGTATCTTCATGACAATTGGGTACTTCATAGGTAATGATTGTTAATCACTAATTTTTCTTCTCCTTTACACATTTTCTGGAATTGGTTTTGATGTTAGATTCTAATAATTATGCTGTTCCATAGGGATCTCAAGACATCTAATCTTCTCTTGAACAACCGCGGTGATTTGAAAATATGTGATTTTGGACTCTCTCGTCAATATGGCAGCCCGTTAAAGCCTTACACCCAGTTGGTTGTGACTTTGTGGTACAGGTAAGTCATTAGACAGTCTATAGTTTCATACAATCAGTCTAACTCAAAATTTAACTTATCCATGGTCTTATTACATGCTCCTTATGACTGCAGGGCTCCAGAATTACTTTTAGGTGCAAAGGATTATTCTACTGCTATTGATATGTGGTCATTGGGTTGCATTATGGGAGAACTCTTATCAAAAGGGCCACTGTTCAATGGGAAAAGCGAGATAGATCAACTTGATAAGGTATATGGTTTTGACTTTTGTCTATTCCATATCTTTATTTTGATTAAGGAAATCTTATGATGAAGTGATTTCCATTGCAGATATTTAGAACACTTGGCACGCCTGATGAGAATATATGGCCTGGTTATTCTAAGTTGCCTGGTGCCACCGTCAAATTTGGCAAACAAACGTAAGTGCCAACTCATTTCTTGTTTCTGCTGGTTTATTTATTTGGATCGTGCAGTTTCTGTATCATATAAAGTCTTACCACTCATTCCTCCCTCAGGCACAATAGATTAAGGGACAAGTTCCGAGCTGTATCATTCACTGGTGGGCCGATGTTGTCAGAAGCTGGATTTGATCTGCTAAATAGATTACTGACATATGACCCTGAGAAGGTAATACACTTAATAGAGTGATCCATCTGATTCTTGTATCTTCATTTTGTAGCTGACTGAACATGGTTTTTTCATACAGCGTATATCAGCAGAAGATGCCTTGAATCATGAATGGTTTCGCGAACTACCTCTGCCTAGATCAAAGGATTTCATGCCAACATTTCCTGCTCTAAATGAGCAAGACAGGTACGAGTGATTTTGCTTTTGACTTCTAATTTATCATCCTAATTCTGAAATTGGCGTTTTATGTGGTTTGTAATGTTGTATTTGCAAAACATGCAGGCGCTTCAAGAAACATATGAAGAGCCCTGATCCTCTGGAAGAACAACGGATGAAAGAACAAGGGAACAATGGAGATCGTGGCCTTTTTGGCTAATCTTGAACCATCACTATAGGTCTGCTGTGGATGCTAATTTTCAGCGTGGAATCAATGGAAGTACATGTCTTCCAAGGTGAGATATCCACTGGAATGAAGTATCTGTCTTCTTGGTGCCTGCGACAACTGATGGCGTTCTTTAGCAGGCATAAGAAGGGGGATAACATGTCTCCTTATGGTCCATGCTAGCTATTATATCATTGCAGGGTTACTGGGTTAGCTCTTTCTCAGACTTCTGGTCACAATCTAATTCACCTGCATTATAAGGTGTGCAGATCTAACCCACCTGCATGATCTGGCCTATTAACTTCTATCTGGTGCACCAGTTTTGCTTCTGAAATTTCTGACTGTAAAGTACCTTAGTTTGGTACTTTGTAAACAATGATCAACAGGACCTTTTTTTTTTCTGTGCCACGAGCACATTTTCTTTTGATCTTCGCATTTTGTTTGCAAGAGATGGATGGAGCAAAGAGGGAGGGTGCATTATGCTTTTTGACGAGGAAACTGGTACATAGTAATGCGAAATGTAAGGTAATATGCTGAGGCTTATTGTGTCCACTGATGTGGTGTATAAAAATGAAATGTATCTTTAATCTTTTTACTGT
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| CDS seq | ATGGCTGCGGGGAGCCACGGGGGGTACAGGGGCTACGAGGTGGCGAGGGAGCGGGAGCATGACGTGGGGGTCTCTAGGAGGAGCAAGGAGCACTACCACCACCGCCACCCGAGCCGCCACCGCGACTCGGAACGCCGCCGTGACGGCGGGCGCAGCGGTGGCCGGGAGCTGTCGAATGGGTACAGCCACCGCCGGGATTCGCCGCGTCCACCACCGAGGAGGCGTCCATCGGAAGGGAGGACGGAGGACAGGGAGCCTGGCGAGGTCTCAGGCGGGAGTGGCTCAGAGAGGTCCGGTGAACGCCCAATGAAGACCAGGGAGCCGAGGGAGAATGGTGTCACGCGAGTCAGCAAGGAGGAGGCGAAGATGTCCCCGAGTAAGAAGAGGAAGCAATCTCCAGTAATTTGGGACAGGAATGGTTCACAGCGGCAGGCTCGAGACCCTGTGAGGGGCATTAGAGAGGTAGATGCTGTAGTTGCTGAGATTATTATGCATCAGTCGCATTCCTTGCCTGTCATGAGCTCACTGTCTAGCATAGGGGATGGACACTCGCCAATGATGTTGGATGTGTCAGTTGATAAGGTACAGGAGTATGAGAAGAACAGGATTGTGGATGAGGAGGAAGAGGGATACCCAACAATGAGAAACATTCTGACCTCAAGATGGGCAGATGCTGGCGACGAGGAGGAAAATGTGTTTGTGCCCAAGAAAAAGAAGAGCGTGTCACCTGTCGACTCGATTGAACGAGGGTCCACAAAAAAGGTTACAAGCCCTGAGTCTGGAGAGGTGCTGGTGTATAACTCAGTGAGAAGCTCCTCAAGGTCATCTGACTCGGGGGTATTACAGGGTAGTGCAAACCGGGACCTTGAAGTGGAGAAGGGTGACAACATAGATGTTGAGAAGGCGGCTGATGATGATTATCCTGCTGGTCATTTGCTGGATTCTGATTTTGAAGGTGAGGACTGTAGGTCTGAAACCCCTGAGTGTACACGGTCCCCACGTAGGTGCATTAACATGCTTCAAGGTTGTAGGAGCGTTGATGAGTTTGAAAGACTCAACACAATCAATGAGGGTACATATGGAGTTGTATTTAGGGTGAGGGATAAGAGAACTGGTGAGATTGTTGCGCTGAAGAAGGTCAAGATGGAGAAGGAAAGGGAAGGTTTCCCACTGACTTCTCTTAGGGAAATGAATATCTTGTTATCCTTCCACCACCCTTCGATTGTGGAAGTCAAGGAAGTAGTTGTTGGTAGTAATGACAGAGATATTTTCATGGTGATGGAGTACATGGAACATGATCTTAAGGGTGTTATGGAGACAATGAAACAACCGTATAGTCAAAGTGAGGTCAAATGCTTGATGCTTCAGCTATTAGAAGGTGTGAAGTATCTTCATGACAATTGGGTACTTCATAGGGCTCCAGAATTACTTTTAGGTGCAAAGGATTATTCTACTGCTATTGATATGTGGTCATTGGGTTGCATTATGGGAGAACTCTTATCAAAAGGGCCACTGTTCAATGGGAAAAGCGAGATAGATCAACTTGATAAGATATTTAGAACACTTGGCACGCCTGATGAGAATATATGGCCTGGTTATTCTAAGTTGCCTGGTGCCACCGTCAAATTTGGCAAACAAACGCACAATAGATTAAGGGACAAGTTCCGAGCTGTATCATTCACTGGTGGGCCGATGTTGTCAGAAGCTGGATTTGATCTGCTAAATAGATTACTGACATATGACCCTGAGAAGCGTATATCAGCAGAAGATGCCTTGAATCATGAATGGTTTCGCGAACTACCTCTGCCTAGATCAAAGGATTTCATGCCAACATTTCCTGCTCTAAATGAGCAAGACAGGCGCTTCAAGAAACATATGAAGAGCCCTGATCCTCTGGAAGAACAACGGATGAAAGAACAAGGGAACAATGGAGATCGTGGCCTTTTTGGCTAA
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| Protein seq | MAAGSHGGYRGYEVAREREHDVGVSRRSKEHYHHRHPSRHRDSERRRDGGRSGGRELSNGYSHRRDSPRPPPRRRPSEGRTEDREPGEVSGGSGSERSGERPMKTREPRENGVTRVSKEEAKMSPSKKRKQSPVIWDRNGSQRQARDPVRGIREVDAVVAEIIMHQSHSLPVMSSLSSIGDGHSPMMLDVSVDKVQEYEKNRIVDEEEEGYPTMRNILTSRWADAGDEEENVFVPKKKKSVSPVDSIERGSTKKVTSPESGEVLVYNSVRSSSRSSDSGVLQGSANRDLEVEKGDNIDVEKAADDDYPAGHLLDSDFEGEDCRSETPECTRSPRRCINMLQGCRSVDEFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNILLSFHHPSIVEVKEVVVGSNDRDIFMVMEYMEHDLKGVMETMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPALNEQDRRFKKHMKSPDPLEEQRMKEQGNNGDRGLFG |
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| Function | Cyclin-dependent kinase G-1 [UniProtKB/Swiss-Prot:A2X6X1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_02g0023430 | OsIR64_02g0023430.01 | Chr02 | 24620672 | 24623718 | + | NAM | ||
| CDS seq | ATGGCTGCGGGGAGCCACGGGGGGTACAGGGGCTACGAGGTGGCGAGGGAGCGGGAGCATGACGTGGGGGTCTCTAGGAGGAGCAAGGAGCACTACCACCACCGCCACCCGAGCCGCCACCGCGACTCGGAACGCCGCCGTGACGGCGGGCGCAGCGGTGGCCGGGAGCTGTCGAATGGGTACAGCCACCGCCGGGATTCGCCGCGTCCACCACCGAGGAGGCGTCCATCGGAAGGGAGGACGGAGGACAGGGAGCCTGGCGAGGTCTCAGGCGGGAGTGGCTCAGAGAGGTCCGGTGAACGCCCAATGAAGACCAGGGAGCCGAGGGAGAATGGTGTCACGCGAGTCAGCAAGGAGGAGGCGAAGATGTCCCCGAGTAAGAAGAGGAAGCAATCTCCAGTAATTTGGGACAGGAATGGTTCACAGCGGCAGGCTCGAGACCCTGTGAGGGGCATTAGAGAGGTAGATGCTGTAGTTGCTGAGATTATTATGCATCAGTCGCATTCCTTGCCTGTCATGAGCTCACTGTCTAGCATAGGGGATGGACACTCGCCAATGATGTTGGATGTGTCAGTTGATAAGGTACAGGAGTATGAGAAGAACAGGATTGTGGATGAGGAGGAAGAGGGATACCCAACAATGAGAAACATTCTGACCTCAAGATGGGCAGATGCTGGCGACGAGGAGGAAAATGTGTTTGTGCCCAAGAAAAAGAAGAGCGTGTCACCTGTCGACTCGATTGAACGAGGGTCCACAAAAAAGGTTACAAGCCCTGAGTCTGGAGAGGTGCTGGTGTATAACTCAGTGAGAAGCTCCTCAAGGTCATCTGACTCGGGGGTATTACAGGGTAGTGCAAACCGGGACCTTGAAGTGGAGAAGGGTGACAACATAGATGTTGAGAAGGCGGCTGATGATGATTATCCTGCTGGTCATTTGCTGGATTCTGATTTTGAAGGTGAGGACTGTAGGTCTGAAACCCCTGAGTGTACACGGTCCCCACGTAGGTGCATTAACATGCTTCAAGGTTGTAGGAGCGTTGATGAGTTTGAAAGACTCAACACAATCAATGAGGGTACATATGGAGTTGTATTTAGGGTGAGGGATAAGAGAACTGGTGAGATTGTTGCGCTGAAGAAGGTCAAGATGGAGAAGGAAAGGGAAGGTTTCCCACTGACTTCTCTTAGGGAAATGAATATCTTGTTATCCTTCCACCACCCTTCGATTGTGGAAGTCAAGGAAGTAGTTGTTGGTAGTAATGACAGAGATATTTTCATGGTGATGGAGTACATGGAACATGATCTTAAGGGTGTTATGGAGACAATGAAACAACCGTATAGTCAAAGTGAGGTCAAATGCTTGATGCTTCAGCTATTAGAAGGTGTGAAGTATCTTCATGACAATTGGGTACTTCATAGGGCTCCAGAATTACTTTTAGGTGCAAAGGATTATTCTACTGCTATTGATATGTGGTCATTGGGTTGCATTATGGGAGAACTCTTATCAAAAGGGCCACTGTTCAATGGGAAAAGCGAGATAGATCAACTTGATAAGATATTTAGAACACTTGGCACGCCTGATGAGAATATATGGCCTGGTTATTCTAAGTTGCCTGGTGCCACCGTCAAATTTGGCAAACAAACGCACAATAGATTAAGGGACAAGTTCCGAGCTGTATCATTCACTGGTGGGCCGATGTTGTCAGAAGCTGGATTTGATCTGCTAAATAGATTACTGACATATGACCCTGAGAAGCGTATATCAGCAGAAGATGCCTTGAATCATGAATGGTTTCGCGAACTACCTCTGCCTAGATCAAAGGATTTCATGCCAACATTTCCTGCTCTAAATGAGCAAGACAGGCGCTTCAAGAAACATATGAAGAGCCCTGATCCTCTGGAAGAACAACGGATGAAAGAACAAGGGAACAATGGAGATCGTGGCCTTTTTGGCTAA
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| Protein seq | MAAGSHGGYRGYEVAREREHDVGVSRRSKEHYHHRHPSRHRDSERRRDGGRSGGRELSNGYSHRRDSPRPPPRRRPSEGRTEDREPGEVSGGSGSERSGERPMKTREPRENGVTRVSKEEAKMSPSKKRKQSPVIWDRNGSQRQARDPVRGIREVDAVVAEIIMHQSHSLPVMSSLSSIGDGHSPMMLDVSVDKVQEYEKNRIVDEEEEGYPTMRNILTSRWADAGDEEENVFVPKKKKSVSPVDSIERGSTKKVTSPESGEVLVYNSVRSSSRSSDSGVLQGSANRDLEVEKGDNIDVEKAADDDYPAGHLLDSDFEGEDCRSETPECTRSPRRCINMLQGCRSVDEFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNILLSFHHPSIVEVKEVVVGSNDRDIFMVMEYMEHDLKGVMETMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPALNEQDRRFKKHMKSPDPLEEQRMKEQGNNGDRGLFG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_02g0023430 | OsIR64_02g0023430.02 | Chr02 | 24620674 | 24624323 | + | IsoSeq | ||
| CDS seq | GCTCTGCGTGCCCGACTTGGCTTTCTCCTCCTCTCTCCTCCCGCAACCCGCGCACGATTCGGTTCCCCCTCTCCTCGCGGCCGCCTCTTCCCCCCTCGAATCCCGATAAGCAGAGGCGGAATTCTCCACCGCGGCAGCAACCTGCAACCCCCAGTTCGATTCGGCTGCGAGGTGAGGTCGTCCGATTCCCAATTCGGTCGGAATCACGCCCAATTTTTTGTCTCTACTAGGGTTTGGTTTCGGTCTGAGGAT
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| Protein seq | ALRARLGFLLLSPPATRARFGSPSPRGRLFPPRIPISRGGILHRGSNLQPPVRFGCEVRSSDSQFGRNHAQFFVSTRVWFRSED |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr02 | 24622514 | 24622830 | + | OsIR64_02g0023430.02 | OsIR64_02g0023430.02,OsIR64_02g0023430.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.037558 | 1.749470 | 3.301933 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0602100 | RBH | 6.636338 | 6.740887 | 9.024370 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g39010 | RBH | 4.004917 | 4.134384 | 2.375272 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0602100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0023870 | RBH | 2.913488 | 20.127905 | 22.230150 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0024060 | RBH | 1.012899 | 9.534109 | 7.211226 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0024020 | RBH | 4.480712 | 15.068990 | 23.994488 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0023670 | RBH | 0.556416 | 0.406258 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0023620 | RBH | 15.581073 | 55.439011 | 42.385826 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0469300 | SBH | 19.5742855 | 42.136076 | 67.8799475 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0017110 | RBH | 1.086522 | 1.207851 | 2.361083 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0412400 | RBH | 28.708768 | 133.568096 | 41.7032015 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0023720 | RBH | 0.812773 | 1.221232 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0023670 | RBH | 1.725381 | 22.546019 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0023970 | RBH | 19.814823 | 57.164448 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0023720 | RBH | 2.475277 | 1.847620 | 2.807081 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0023440 | RBH | 1.334997 | 12.051617 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G023860 | RBH | 1.868041 | 3.573182 | 6.097153 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0023740 | RBH | 6.356270 | 54.799534 | 14.492719 |
