Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_02g0001330 | OGI:02003970 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr02:905367-907152 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGGCCATGGTTCTATTGACCTTGGGGCGTCGGCGGCGGCCGGCGGCGGCGAAGACGGTGCGAGAGGGCGGCGTCGGCGGCGGCGGCGGCTCCCTGCAGCCACACAACCTGCTGCTGCATGGCAGCATAGCTCAGTACGGCATTCTGGCTTACTCATGCGAAGCAAGCCCACACTTCCGCTCCCCCCACCATGCGACCCCTCCACGGAGGACGGAGCTGCATCCGCCTCCCGCCCAAGTTCCAGTTGCATCCGCGTCCTATCCCTCCATTCACACTATTGAAGTATTCATCCGTCACCATCGGCGTGAGAGGCGAAATCCCCCTCTCAACTTGGCCGGTTGATGATACGTCAGGTCCAGCTCTGCTCTGCAGTGTTAAATTTTTTTCAATTCCAAGTTGAAACCTGAAATTTCTCTATGTTGGTTGTTGATCTGTCCAGTTCGAGTGGAGTTCAACGGCATAATCGGTATATTGTAATACCCTCACGCAGCTGCCTTTGCGACTCATATCATGTATGGACGGTAATCCATTCCTGTACTGTTATACCCTCAGCTCCAAGCTCGTCGATACATTAGATTAGGTAACACCGTATGGTAATCCTATTTTATATTTTACAAGTTGCATTCTTAGCTAGATGAGATGGTTACTGAATCAACACCTTACTTTTGTCGTGGTTTGTAGGTGCTTCCAGGAAATTGCTTTGTACTATCCTTACAGGTTACTACTATTTAGAAATGTTTTGTTCCTTCGTAATGTTTTTCGCTGCCGCTTGTACCACTTGTATTATAGTAATGCTGTTCCACGCATGAACTTATCTCGACAGTTTTTTTAAGCTAAATAACTGGTCTGTAGCATCATGAGCTACTAGTTTTGTCAAGGTCGATGGATACACTATTATTCATTAGCAAAGATAACTGTGCTGCATAGGTGCATGGAGCCGTAGACAGTTCACTAATAAACTGTTTACCAATGCTTTATTGCAGCTGTGTACTGAAGAACCTGCAGTGTAAACCTCACATCTTTTTTATTTGACTCTTTATATGTTGCATGCCTTGTGTTATGCCATCCCTGTTGCTTCCATAATGCATCGTTGCGCTCCATTCTTCTAAATCCATCTTCTTGTGCAGGGCTTGTTCTAGCCTCCGTCGCCTTAGTTGCAGTGTGGATAATGGGGTTGGTTGCCACTGCAATTGAGGCTGCAATAGGATGGGTGGTTGAGAGCATCCTCGGAAATTTCTTCACTGGACAGATGCAAGTGTGGACTCGTGAAGTTGGCCTTTCTGAAGAAGTGGAGGAGCTTGAGACTGAGATGAGGAGCATGCAGATGGTGCTTGCAGCTGCCGAGAGTAGCAAGATTGACAACAGGCCACTGTCCGAGTCACTTGATGAGCTAAAAGAGCTGCTTTATGATGCTGAGGACGTGATGGACGAGCTTGATTACTACCGGCTCCAGCAACACATCGAAGGTGGTAACACACTCATCAACCTTCCATTCCTTGTTTCTTGCTTCATGCTTCTTTTGCATTTGTGTATTTGTGAGCTTACTGTGCTACTAAGAGCAGCTAAATACCATAATCCATAGGCACCAGTCACCGCACATCAGTTTTTATCAGTTAATTGTGATTACGTTACCATCATTTCAACTTCCATTATTTACCATTTTTAAGAAACCTTAATTATTAGCAGTGGATTGCACAAGTGGCTTTCTTTTGCTTGTCCCTTAACACCAAGTTTTTTTCTTATCCAGGGAAAGGTTCTACTGCTGCTTCTTGTACTAACCCTTAG
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| CDS seq | ATGGGCCATGGTTCTATTGACCTTGGGGCGTCGGCGGCGGCCGGCGGCGGCGAAGACGGGCTTGTTCTAGCCTCCGTCGCCTTAGTTGCAGTGTGGATAATGGGGTTGGTTGCCACTGCAATTGAGGCTGCAATAGGATGGGTGGTTGAGAGCATCCTCGGAAATTTCTTCACTGGACAGATGCAAGTGTGGACTCGTGAAGTTGGCCTTTCTGAAGAAGTGGAGGAGCTTGAGACTGAGATGAGGAGCATGCAGATGGTGCTTGCAGCTGCCGAGAGTAGCAAGATTGACAACAGGCCACTGTCCGAGTCACTTGATGAGCTAAAAGAGCTGCTTTATGATGCTGAGGACGTGATGGACGAGCTTGATTACTACCGGCTCCAGCAACACATCGAAGGTGGGAAAGGTTCTACTGCTGCTTCTTGTACTAACCCTTAG
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| Protein seq | MGHGSIDLGASAAAGGGEDGLVLASVALVAVWIMGLVATAIEAAIGWVVESILGNFFTGQMQVWTREVGLSEEVEELETEMRSMQMVLAAAESSKIDNRPLSESLDELKELLYDAEDVMDELDYYRLQQHIEGGKGSTAASCTNP |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_02g0001330 | OsIR64_02g0001330.01 | Chr02 | 905367 | 907152 | + | NAM | ||
| CDS seq | ATGGGCCATGGTTCTATTGACCTTGGGGCGTCGGCGGCGGCCGGCGGCGGCGAAGACGGGCTTGTTCTAGCCTCCGTCGCCTTAGTTGCAGTGTGGATAATGGGGTTGGTTGCCACTGCAATTGAGGCTGCAATAGGATGGGTGGTTGAGAGCATCCTCGGAAATTTCTTCACTGGACAGATGCAAGTGTGGACTCGTGAAGTTGGCCTTTCTGAAGAAGTGGAGGAGCTTGAGACTGAGATGAGGAGCATGCAGATGGTGCTTGCAGCTGCCGAGAGTAGCAAGATTGACAACAGGCCACTGTCCGAGTCACTTGATGAGCTAAAAGAGCTGCTTTATGATGCTGAGGACGTGATGGACGAGCTTGATTACTACCGGCTCCAGCAACACATCGAAGGTGGGAAAGGTTCTACTGCTGCTTCTTGTACTAACCCTTAG
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| Protein seq | MGHGSIDLGASAAAGGGEDGLVLASVALVAVWIMGLVATAIEAAIGWVVESILGNFFTGQMQVWTREVGLSEEVEELETEMRSMQMVLAAAESSKIDNRPLSESLDELKELLYDAEDVMDELDYYRLQQHIEGGKGSTAASCTNP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.306527 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0262800 | SBH | 0.685138 | 1.192483 | 0.394301 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g02640 | SBH | 0.122621 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0262800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0001360 | SBH | 0.057419 | 1.909588 | 1.050987 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0001410 | RBH | 0.000000 | 0.000000 | 0.090354 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0001350 | SBH | 0.0 | 1.578555 | 0.418119 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0001350 | SBH | 0.004316 | 0.021780 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0001360 | RBH | 0.0 | 2.597426 | 0.468538 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0015900 | RBH | 0.2911705 | 29.9435425 | 0.2131975 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0001340 | RBH | 0.000000 | 0.142351 | 0.725736 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0016300 | RBH | 1.3078815 | 13.5964565 | 4.45472 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0001360 | RBH | 0.016734 | 0.160614 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0001300 | SBH | 0.0 | 12.066147 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0001370 | RBH | 0.000000 | 6.383474 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0001410 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0001400 | SBH | 0.000000 | 5.480076 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G001370 | RBH | 0.0 | 0.476023 | 0.075552 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0001340 | SBH | 0.341320 | 8.698702 | 1.728364 |
