Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_01g0045380 | OGI:01121600 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr01:42735173-42737567 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATCGACGATCAGGAGCGAGCATTGAAGCATACGTATATCCATCTCCAGAAACTCGATCAAGCATACTAGCTGAGACAGATCGAGTCACCTAGCTATTTGAGCAAATGGGAGGTATATATTTTAGATTATTCATTATTTTCCTTCCTTTTTTCAAGCAGTTAATTCTCTATTTTCGTTGATTTGATCGATCGATCGATCGATCGTAATACGGTTGAGTGGTGCCGTGGTGATGATGCAGCTGTCAATGGTGTTTGCTACGGTGTTCTTGGCGACAACCTCCCGTCGCGGAGCGAGGTCGTGCAGCTGCTCAAGTCCCAAGGCATCGGCGCGATGCGCATCTACTACCCGGACAAGGAGGCCCTCGACGCGCTCCGCGGCAGCGGCATCGCCGTCATCGTCGACGTCGGCGACAGCGGCGCGGTGGCCAACCTCGCCAACAACCCCTCCGCCGCCGCCGACTGGGTCCGGGACAACGTCGAGGCCTACTGGCCGAGCGTCATCATCCGCTACATCACCGTCGGCAACGAGCTCCCCGCCGGCGACATGGGCCTCATCCTCCCGGCCATGCAGAACGTGCACAAGGCCCTCGTGTCCGCCGGCCTCTCGAGCAGCATCAAGGTGTCGACGGCGATCAAGATGGACGTGGTCGCCAACACGTTCCCCCCGTCGCACGGCGTGTTCAGCTCTGACGTGCAGCAGTTCATGGTTCCCATCGCGCGGTTCCTGGCCAACACCGTGTCGCCGCTGCTCGTCAACGTGTACCCCTACGTCTCATACAGGGAAAACCCGCGCGACATCAGCCTCAACTACGCCACGTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAGCGGCCTCACCTACACCAACCTGTTCAACGCCATGGTGGACGCCGTGTACGCCGCGCTGGAGAAGGCCGGCACGCCAAACGTCCGCGTCGCCGTGTCGGAGACCGGGTGGCCGTCGGCGGGAGGGTTCGCCGCGACGGCAGAGAACGCGATGAACCACAACCAGGGCGTGATCGACAACGTCAAGAACGGGACGCCGAAGCGGCCCGGGCCACTGGAGACGTACGTGTTCGCCATGTTCAACGAGAACCAGCAGACTGGCGATGAGACCAGGAGGCATTTCGGCCTCTTCAACCCTGACAAGACGCCGGCCTACCCGATTACACGTATGCCATTATCGCATTTCGTATGATATATCGTCGTATATATATCCGCACGTACGTTGGTATGTAGCTAACGGGTGCGTGCACGCGTGTTGGTAATTTTTTGTAGCTTATCCTCGTCCGGCCGTGCAATCCATCGGCGTGTGCTACGGCATGGTGGGCAACGACCTCCCGTCACGTAGCGAGGTGGTGCAGATGTACGTGTCCATGGGCATCAATCGGATGCGCATCTACAATCCCGACAGGGAGGCGCTGGACGCCCTGCGCAACTCCGGAATCGACCTCATCCTCGACGCCGGCGGCTTCGACACGGTGTCCTACCTCGCCGCCAGCGCCTCCAACGCGGCGTCCTGGGTCCATGACAACATCAGCCCCTACTACCCGGCCGTCAACATCAAGTACATAGCCGTCGGCAACGAGGTGGTAGGCGGCACCACGGAGAGCATCCTCCCGGCCATGCGCAACGTCAACTCCGCCCTTGCCGCGGCCGGCATCGGCGGCATCAAGGTTTCCACCGCGGTGAAATCCGACGTGATCGCCAACTCTTACCCTCCCTCCGCCGGCGTGTTCGCGTATCCCTACATGAATGGCGTAGCCCAGTACCTGGCGAGCACCGGCGCGCCGCTGCTGGCCAACGTGTACCCCTACTTCGCCTACGCCGGCAACCCGCGCGAGATCAGCCTCAACTACGCCACCTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAACGGGCTCACCTACACCAACCTGTTCGACGCCATGGTGGACTGCATCTACGCCGCGCTGGAGAAGGCCGGCGCCGGGAACGTGAGGGTGGTGGTGTCGGAGAGCGGGTGGCCGTCGGCGGAAGGGTTCGGGGCGAGCATGGACAACGCGAGGGCGTACAACCAGGGGCTGATCGACCATGTCGGGCGTGGCACGCCCAAGAGGCCCGGACAGATGGAGGCGTACATATTTGCCATGTTCAACGAGAACCAGAAGACCGGGGCTGCCACCGAGAGGCATTTTGGCCTCTTCTACCCTAACAGGTCGCCGGTCTATCAGATTGCCTTTCCGAATTAGCAGCTGCTAATACGAGCATGGATCTGCAGGCAATCGAGTAATGCTTCAGTAATGTTGTGTTGGGTGTATTTTAATGTTCTCTGTGTGCTGCCACTTTACGCTTTGATAATGCATGCATGCGCATGAATAAAAACTTTTGAAGGTTTCTTAACGGTTGAC
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| CDS seq | ATGGGAGCTGTCAATGGTGTTTGCTACGGTGTTCTTGGCGACAACCTCCCGTCGCGGAGCGAGGTCGTGCAGCTGCTCAAGTCCCAAGGCATCGGCGCGATGCGCATCTACTACCCGGACAAGGAGGCCCTCGACGCGCTCCGCGGCAGCGGCATCGCCGTCATCGTCGACGTCGGCGACAGCGGCGCGGTGGCCAACCTCGCCAACAACCCCTCCGCCGCCGCCGACTGGGTCCGGGACAACGTCGAGGCCTACTGGCCGAGCGTCATCATCCGCTACATCACCGTCGGCAACGAGCTCCCCGCCGGCGACATGGGCCTCATCCTCCCGGCCATGCAGAACGTGCACAAGGCCCTCGTGTCCGCCGGCCTCTCGAGCAGCATCAAGGTGTCGACGGCGATCAAGATGGACGTGGTCGCCAACACGTTCCCCCCGTCGCACGGCGTGTTCAGCTCTGACGTGCAGCAGTTCATGGTTCCCATCGCGCGGTTCCTGGCCAACACCGTGTCGCCGCTGCTCGTCAACGTGTACCCCTACGTCTCATACAGGGAAAACCCGCGCGACATCAGCCTCAACTACGCCACGTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAGCGGCCTCACCTACACCAACCTGTTCAACGCCATGGTGGACGCCGTGTACGCCGCGCTGGAGAAGGCCGGCACGCCAAACGTCCGCGTCGCCGTGTCGGAGACCGGGTGGCCGTCGGCGGGAGGGTTCGCCGCGACGGCAGAGAACGCGATGAACCACAACCAGGGCGTGATCGACAACGTCAAGAACGGGACGCCGAAGCGGCCCGGGCCACTGGAGACGTACGTGTTCGCCATGTTCAACGAGAACCAGCAGACTGGCGATGAGACCAGGAGGCATTTCGGCCTCTTCAACCCTGACAAGACGCCGGCCTACCCGATTACACCTTATCCTCGTCCGGCCGTGCAATCCATCGGCGTGTGCTACGGCATGGTGGGCAACGACCTCCCGTCACGTAGCGAGGTGGTGCAGATGTACGTGTCCATGGGCATCAATCGGATGCGCATCTACAATCCCGACAGGGAGGCGCTGGACGCCCTGCGCAACTCCGGAATCGACCTCATCCTCGACGCCGGCGGCTTCGACACGGTGTCCTACCTCGCCGCCAGCGCCTCCAACGCGGCGTCCTGGGTCCATGACAACATCAGCCCCTACTACCCGGCCGTCAACATCAAGTACATAGCCGTCGGCAACGAGGTGGTAGGCGGCACCACGGAGAGCATCCTCCCGGCCATGCGCAACGTCAACTCCGCCCTTGCCGCGGCCGGCATCGGCGGCATCAAGGTTTCCACCGCGGTGAAATCCGACGTGATCGCCAACTCTTACCCTCCCTCCGCCGGCGTGTTCGCGTATCCCTACATGAATGGCGTAGCCCAGTACCTGGCGAGCACCGGCGCGCCGCTGCTGGCCAACGTGTACCCCTACTTCGCCTACGCCGGCAACCCGCGCGAGATCAGCCTCAACTACGCCACCTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAACGGGCTCACCTACACCAACCTGTTCGACGCCATGGTGGACTGCATCTACGCCGCGCTGGAGAAGGCCGGCGCCGGGAACGTGAGGGTGGTGGTGTCGGAGAGCGGGTGGCCGTCGGCGGAAGGGTTCGGGGCGAGCATGGACAACGCGAGGGCGTACAACCAGGGGCTGATCGACCATGTCGGGCGTGGCACGCCCAAGAGGCCCGGACAGATGGAGGCGTACATATTTGCCATGTTCAACGAGAACCAGAAGACCGGGGCTGCCACCGAGAGGCATTTTGGCCTCTTCTACCCTAACAGGTCGCCGGTCTATCAGATTGCCTTTCCGAATTAG
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| Protein seq | MGAVNGVCYGVLGDNLPSRSEVVQLLKSQGIGAMRIYYPDKEALDALRGSGIAVIVDVGDSGAVANLANNPSAAADWVRDNVEAYWPSVIIRYITVGNELPAGDMGLILPAMQNVHKALVSAGLSSSIKVSTAIKMDVVANTFPPSHGVFSSDVQQFMVPIARFLANTVSPLLVNVYPYVSYRENPRDISLNYATFQPGTTVRDDGSGLTYTNLFNAMVDAVYAALEKAGTPNVRVAVSETGWPSAGGFAATAENAMNHNQGVIDNVKNGTPKRPGPLETYVFAMFNENQQTGDETRRHFGLFNPDKTPAYPITPYPRPAVQSIGVCYGMVGNDLPSRSEVVQMYVSMGINRMRIYNPDREALDALRNSGIDLILDAGGFDTVSYLAASASNAASWVHDNISPYYPAVNIKYIAVGNEVVGGTTESILPAMRNVNSALAAAGIGGIKVSTAVKSDVIANSYPPSAGVFAYPYMNGVAQYLASTGAPLLANVYPYFAYAGNPREISLNYATFQPGTTVRDDGNGLTYTNLFDAMVDCIYAALEKAGAGNVRVVVSESGWPSAEGFGASMDNARAYNQGLIDHVGRGTPKRPGQMEAYIFAMFNENQKTGAATERHFGLFYPNRSPVYQIAFPN |
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| Function | Glucan endo-1,3-beta-glucosidase GII [UniProtKB/Swiss-Prot:P15737] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_01g0045380 | OsIR64_01g0045380.01 | Chr01 | 42735173 | 42737567 | + | NAM | ||
| CDS seq | ATGGGAGCTGTCAATGGTGTTTGCTACGGTGTTCTTGGCGACAACCTCCCGTCGCGGAGCGAGGTCGTGCAGCTGCTCAAGTCCCAAGGCATCGGCGCGATGCGCATCTACTACCCGGACAAGGAGGCCCTCGACGCGCTCCGCGGCAGCGGCATCGCCGTCATCGTCGACGTCGGCGACAGCGGCGCGGTGGCCAACCTCGCCAACAACCCCTCCGCCGCCGCCGACTGGGTCCGGGACAACGTCGAGGCCTACTGGCCGAGCGTCATCATCCGCTACATCACCGTCGGCAACGAGCTCCCCGCCGGCGACATGGGCCTCATCCTCCCGGCCATGCAGAACGTGCACAAGGCCCTCGTGTCCGCCGGCCTCTCGAGCAGCATCAAGGTGTCGACGGCGATCAAGATGGACGTGGTCGCCAACACGTTCCCCCCGTCGCACGGCGTGTTCAGCTCTGACGTGCAGCAGTTCATGGTTCCCATCGCGCGGTTCCTGGCCAACACCGTGTCGCCGCTGCTCGTCAACGTGTACCCCTACGTCTCATACAGGGAAAACCCGCGCGACATCAGCCTCAACTACGCCACGTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAGCGGCCTCACCTACACCAACCTGTTCAACGCCATGGTGGACGCCGTGTACGCCGCGCTGGAGAAGGCCGGCACGCCAAACGTCCGCGTCGCCGTGTCGGAGACCGGGTGGCCGTCGGCGGGAGGGTTCGCCGCGACGGCAGAGAACGCGATGAACCACAACCAGGGCGTGATCGACAACGTCAAGAACGGGACGCCGAAGCGGCCCGGGCCACTGGAGACGTACGTGTTCGCCATGTTCAACGAGAACCAGCAGACTGGCGATGAGACCAGGAGGCATTTCGGCCTCTTCAACCCTGACAAGACGCCGGCCTACCCGATTACACCTTATCCTCGTCCGGCCGTGCAATCCATCGGCGTGTGCTACGGCATGGTGGGCAACGACCTCCCGTCACGTAGCGAGGTGGTGCAGATGTACGTGTCCATGGGCATCAATCGGATGCGCATCTACAATCCCGACAGGGAGGCGCTGGACGCCCTGCGCAACTCCGGAATCGACCTCATCCTCGACGCCGGCGGCTTCGACACGGTGTCCTACCTCGCCGCCAGCGCCTCCAACGCGGCGTCCTGGGTCCATGACAACATCAGCCCCTACTACCCGGCCGTCAACATCAAGTACATAGCCGTCGGCAACGAGGTGGTAGGCGGCACCACGGAGAGCATCCTCCCGGCCATGCGCAACGTCAACTCCGCCCTTGCCGCGGCCGGCATCGGCGGCATCAAGGTTTCCACCGCGGTGAAATCCGACGTGATCGCCAACTCTTACCCTCCCTCCGCCGGCGTGTTCGCGTATCCCTACATGAATGGCGTAGCCCAGTACCTGGCGAGCACCGGCGCGCCGCTGCTGGCCAACGTGTACCCCTACTTCGCCTACGCCGGCAACCCGCGCGAGATCAGCCTCAACTACGCCACCTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAACGGGCTCACCTACACCAACCTGTTCGACGCCATGGTGGACTGCATCTACGCCGCGCTGGAGAAGGCCGGCGCCGGGAACGTGAGGGTGGTGGTGTCGGAGAGCGGGTGGCCGTCGGCGGAAGGGTTCGGGGCGAGCATGGACAACGCGAGGGCGTACAACCAGGGGCTGATCGACCATGTCGGGCGTGGCACGCCCAAGAGGCCCGGACAGATGGAGGCGTACATATTTGCCATGTTCAACGAGAACCAGAAGACCGGGGCTGCCACCGAGAGGCATTTTGGCCTCTTCTACCCTAACAGGTCGCCGGTCTATCAGATTGCCTTTCCGAATTAG
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| Protein seq | MGAVNGVCYGVLGDNLPSRSEVVQLLKSQGIGAMRIYYPDKEALDALRGSGIAVIVDVGDSGAVANLANNPSAAADWVRDNVEAYWPSVIIRYITVGNELPAGDMGLILPAMQNVHKALVSAGLSSSIKVSTAIKMDVVANTFPPSHGVFSSDVQQFMVPIARFLANTVSPLLVNVYPYVSYRENPRDISLNYATFQPGTTVRDDGSGLTYTNLFNAMVDAVYAALEKAGTPNVRVAVSETGWPSAGGFAATAENAMNHNQGVIDNVKNGTPKRPGPLETYVFAMFNENQQTGDETRRHFGLFNPDKTPAYPITPYPRPAVQSIGVCYGMVGNDLPSRSEVVQMYVSMGINRMRIYNPDREALDALRNSGIDLILDAGGFDTVSYLAASASNAASWVHDNISPYYPAVNIKYIAVGNEVVGGTTESILPAMRNVNSALAAAGIGGIKVSTAVKSDVIANSYPPSAGVFAYPYMNGVAQYLASTGAPLLANVYPYFAYAGNPREISLNYATFQPGTTVRDDGNGLTYTNLFDAMVDCIYAALEKAGAGNVRVVVSESGWPSAEGFGASMDNARAYNQGLIDHVGRGTPKRPGQMEAYIFAMFNENQKTGAATERHFGLFYPNRSPVYQIAFPN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.216918 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0946500 | RBH | 0.444494 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g71810 | RBH | 0.300590 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0946700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0046650 | RBH | 0.0 | 31.250576 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0046160 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0046580 | RBH | 0.0 | 6.876177 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0046310 | RBH | 0.0 | 1.685419 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0045860 | RBH | 0.0 | 9.583062 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0681300 | RBH | 3.442883 | 0.0150465 | 0.057027 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0014530 | SBH | 0.343081 | 4.319223 | 4.227051 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0683500 | RBH | 7.4921425 | 0.025908 | 0.002766 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0045920 | SBH | 0.0 | 1.052281 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0045760 | SBH | 0.0 | 55.179989 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0046080 | RBH | 0.0 | 45.084187 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0046050 | RBH | 0.0 | 0.440177 | 0.213896 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0045620 | SBH | 0.0 | 12.882791 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G046110 | RBH | 0.0 | 10.141820 | 0.300969 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0045950 | RBH | 0.0 | 3.656847 | 0.0 |
