Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_01g0007850 | OGI:01019990 | 15/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr01:6161420-6161980 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCGAATGAGGTGAATGTCGTGGGGACGGTGAGTTCTCTCAGCAATTCCTAATGAGATTCTTGATTTCTTGCAAGAATTGTATACAATTTATAATTAATTAAATTCTTTATCATTCTTGATTCTATGCAGTCTAACTTCGATTGGGTTGAGCACTCATCTTGGCGTGCTTCTCTATTCTCCCTTGCATGGCGGAGATCCTGTTTGTGATGGTCAATTGATTTGGTAACATCGGCAAGAAACTGTGATTTGTTTCATCACCTCTGTCGTTACCCAGTTTATGACAGTGAGGCGGTGACAACAGCAACGACGACCTCCATCTTTGGCTCTGTCGCCGGATCCAGCTCCTACCGAGATCGCAGTGGCCAGACTTGGTGCTGCCTCGGTTCCAGCCTGCATCTCCACCGCTTTGTCTTCTTGCTCTCTCTAGCAGGACAGAAACTCCATTCAGCCGTCACGAGGAACTGGCGATGGCGTGTATTGTTGTGTTTGTGTGTAAAATTTTTATTCTTGTGCTTTTACTATGATGTGCATGTAAAATCTTTATTTTTTGTCCCGTGA
More
|
||||||||||
| CDS seq | ATGGCGAATGAGGTGAATGTCGTGGGGACGTCTAACTTCGATTGGGTTGAGCACTCATCTTGGCGTGCTTCTCTATTCTCCCTTGCATGGCGGAGATCCTTTTATGACAGTGAGGCGGTGACAACAGCAACGACGACCTCCATCTTTGGCTCTGTCGCCGGATCCAGCTCCTACCGAGATCGCAGTGGCCAGACTTGGTGCTGCCTCGGTTCCAGCCTGCATCTCCACCGCTTTGTCTTCTTGCTCTCTCTAGCAGGACAGAAACTCCATTCAGCCGTCACGAGGAACTGGCGATGGCGTGTATTGTTGTGTTTGTGTGTAAAATTTTTATTCTTGTGCTTTTACTATGATGTGCATGTAAAATCTTTATTTTTTGTCCCGTGA |
||||||||||
| Protein seq | MANEVNVVGTSNFDWVEHSSWRASLFSLAWRRSFYDSEAVTTATTTSIFGSVAGSSSYRDRSGQTWCCLGSSLHLHRFVFLLSLAGQKLHSAVTRNWRWRVLLCLCVKFLFLCFYYDVHVKSLFFVP |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_01g0007850 | OsIR64_01g0007850.01 | Chr01 | 6161420 | 6161980 | + | NAM | ||
| CDS seq | ATGGCGAATGAGGTGAATGTCGTGGGGACGTCTAACTTCGATTGGGTTGAGCACTCATCTTGGCGTGCTTCTCTATTCTCCCTTGCATGGCGGAGATCCTTTTATGACAGTGAGGCGGTGACAACAGCAACGACGACCTCCATCTTTGGCTCTGTCGCCGGATCCAGCTCCTACCGAGATCGCAGTGGCCAGACTTGGTGCTGCCTCGGTTCCAGCCTGCATCTCCACCGCTTTGTCTTCTTGCTCTCTCTAGCAGGACAGAAACTCCATTCAGCCGTCACGAGGAACTGGCGATGGCGTGTATTGTTGTGTTTGTGTGTAAAATTTTTATTCTTGTGCTTTTACTATGATGTGCATGTAAAATCTTTATTTTTTGTCCCGTGA
More
|
|||||||
| Protein seq | MANEVNVVGTSNFDWVEHSSWRASLFSLAWRRSFYDSEAVTTATTTSIFGSVAGSSSYRDRSGQTWCCLGSSLHLHRFVFLLSLAGQKLHSAVTRNWRWRVLLCLCVKFLFLCFYYDVHVKSLFFVP |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017860 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0017620 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0008280 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0007820 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0101700 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0102700 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0009510 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0007910 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0007910 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0007920 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017760 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G007900 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0007760 | RBH | 0.0 | 0.0 | 0.0 |
