Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_12g0015260 | OGI:12050630 | 15/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr12:19786918-19787711 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggctggggtgccgggcgatctagcagctcgtcctgcccttgatttctacatggtggcctccactggagagactgagcgattgcgtgagcttttcattgctcgctcggttgttgcctgggttgaagaaggggaaagggtggaggcgagcacatttgctgatgatgtgcacgctgcattccgcatccgccgctctgatatccaagtcacgaagttccatcctgaagatttctttctcacgctcactaatcatagtgatcgggaggccatcctgcaagaaccaagactgatgctgagaagtggccgtgtgtatcgcttctgtccatgggacaagaggcgcggtgctgaatgcgttgacgttcgctttagggtcagagtatgtgtggcaggaatccccatgcatgcaagaacaaatgcgattgcggcaaagatcatcggcaagaagacctccatccactacattgaagaatactcaaggcgtcgaaactacaaccgcacttttgactattgggtatggagctcagacccgagctctatcccatgagcaacaaggttgacaatcacgtcagcagacgaggaggggctcccagttgacactcccttcccagagctagaagctgtgcatcctgccccttctgacacaaaaaaaggtctcaactatcctgttcttattcatattgacactttgcaagacctggtgtcccgacagggccgctgcttccagtggcgttatggagtggcaaatgatgttgcaagaactagggtaattgctttacccctccaagcctgcagaac
More
|
||||||||||
| CDS seq | atggctggggtgccgggcgatctagcagctcgtcctgcccttgatttctacatggtggcctccactggagagactgagcgattgcgtgagcttttcattgctcgctcggttgttgcctgggttgaagaaggggaaagggtggaggcgagcacatttgctgatgatgtgcacgctgcattccgcatccgccgctctgatatccaagtcacgaagttccatcctgaagatttctttctcacgctcactaatcatagtgatcgggaggccatcctgcaagaaccaagactgatgctgagaagtggccgtgtgtatcgcttctgtccatgggacaagaggcgcggtgctgaatgcgttgacgttcgctttagggtcagagtatgtgtggcaggaatccccatgcatgcaagaacaaatgcgattgcggcaaagatcatcggcaagaagacctccatccactacattgaagaatactcaaggcgtcgaaactacaaccgcacttttgactattgggtatggagctcagacccgagctctatcccatga
More
|
||||||||||
| Protein seq | MAGVPGDLAARPALDFYMVASTGETERLRELFIARSVVAWVEEGERVEASTFADDVHAAFRIRRSDIQVTKFHPEDFFLTLTNHSDREAILQEPRLMLRSGRVYRFCPWDKRRGAECVDVRFRVRVCVAGIPMHARTNAIAAKIIGKKTSIHYIEEYSRRRNYNRTFDYWVWSSDPSSIP |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_12g0015260 | OsGoSa_12g0015260.01 | Chr12 | 19786918 | 19787711 | + | NAM | ||
| CDS seq | atggctggggtgccgggcgatctagcagctcgtcctgcccttgatttctacatggtggcctccactggagagactgagcgattgcgtgagcttttcattgctcgctcggttgttgcctgggttgaagaaggggaaagggtggaggcgagcacatttgctgatgatgtgcacgctgcattccgcatccgccgctctgatatccaagtcacgaagttccatcctgaagatttctttctcacgctcactaatcatagtgatcgggaggccatcctgcaagaaccaagactgatgctgagaagtggccgtgtgtatcgcttctgtccatgggacaagaggcgcggtgctgaatgcgttgacgttcgctttagggtcagagtatgtgtggcaggaatccccatgcatgcaagaacaaatgcgattgcggcaaagatcatcggcaagaagacctccatccactacattgaagaatactcaaggcgtcgaaactacaaccgcacttttgactattgggtatggagctcagacccgagctctatcccatga
More
|
|||||||
| Protein seq | MAGVPGDLAARPALDFYMVASTGETERLRELFIARSVVAWVEEGERVEASTFADDVHAAFRIRRSDIQVTKFHPEDFFLTLTNHSDREAILQEPRLMLRSGRVYRFCPWDKRRGAECVDVRFRVRVCVAGIPMHARTNAIAAKIIGKKTSIHYIEEYSRRRNYNRTFDYWVWSSDPSSIP |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0025130 | SBH | 0.000000 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0025170 | SBH | 0.0 | 1.950535 | 2.731962 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G015230 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0014980 | RBH | 0.0 | 0.0 | 0.0 |
