Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_11g0024400 | OGI:11083430 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr11:31095951-31120436 | ||||||||
| Gene Symbol | riceXIP, C00481, C10150, RIXI, C10701 | ||||||||||
| DNA seq | atgggcctcgtgcacgcactcctccccttagcagcagcggcattgctgctcctcgccgcggcgccgccgccggcgacggccgacgacccgggcctcgccgtctactggggccgccacaaggaggaaggctctctccgtgaggcctgcgacaccggccgctacaccaccgtcatcatcaccttctacgacgtcttcggccacggccgctactccctcgacatctccggccacccgctcgccgccgttggcgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcggcggccagggcggcgcctactccctccccaccaacgcctccgccgccgacgtcgccgacaacctctggaacgcctacctcggcggccaccgcgccggcgtggcgcgacccttcggcgacgacgcggccgtggacggcatcgacttcttcatcgaccagggcggcgccgaccactacgacgacctcgcccggcggctcgacggctacaacaagtactaccgcggcagggtcggcgtggtgctgacggcgacgacgaggtgctcgtacccggaccaccggctggagaaggcgctggcgacgggggtgttcgcgcgcatccatgtgaggatgttcggcgacgagcagtgcaccatgtcgccgaggtactcgtgggagaagtgggcggcggcgttccccggcagcaaggtgtacatcgggctggtggcgtcgccggagcaggacagcgcgtggatgtttcagaaggatctctactacgagatgctgcagttcgtcaggtcgcttcccaactatggtggtttggccatctacgacaggtacttcgacaagaaggccaactacactggtcagggttaattagtgatcatcatctttgctatctgaagtgaagactggatcgattttaccattatgtaaaagatctgaataaagacacctcttttttctgtaacattgtgatttacttcaataatggacgaataaaatgaggtctcagaagctatgttggcatccctccataaaaaaaaaggaaagagggttatgtatggatcagatctcaaataatgcttaataaattaatcgtcactggctgtaatacatcactatgtcagtttatatttcactgctattttaatgtgcgaaatatataaattgtagggagataaaatgccgcttttcgcatatttcgatttgctgccttggaaataaactcggcgcaacgagagtttagccgccaaaacacgagaagctgacaataacattttttttaacctggtagcacggggagctgtaaattaattaattacacccttgggattaaaaataattatcatttggtacaagattgatgttaaacttttaaaaaattttgactatgaataacttataaatttttgagataatatgtatacattaatctcaaaaatgtatttcaataaaaccatatatttactaatatttctatatattgtaatgaaaatagtggtcaaagtatctatatgtaccagttctatagtttacaaatttgttccaacagaaaattacttcaaaacaaaaaaaaagatacaaatgttatgtatttattatgaccggaggtcctactaaacaaaagagtcgccatacacaacgaacaatcacccagctagtgtgtgagctgatgaggatcaacgagaacatgtgaacatgtgaagtgtagcagatcagcagagctttgtcgagatttattatgcgtagctcatcccttcaaaaacaattatgtgtagctcaagtaaaacgaggtcagaacgtctcatatataataactgtacatcaatcgcgcatctgaataatatctttctgcgaataatcaaacatgtacagcgcgttgtgtgtatttcactcatagcatccattgaattggattcgccattcgttgaccaccgacatcagtagaatccggagggcttgaaataatagggggttgtaaatggaacagggcctatgagttctttctcaactcatctcactacttaaatatggtaagaaaaaaaaggaaaaagaatgtggtaaattttaaccagttcttctattatttacggtgtttatgttattggatttacagttagaatgtgataaatctgaacaacgtaagataaaccttgctccagtctcgatcttgtccgaggcatcattagttaagaaaggattttatgaaaccgtttcaaacggatggagagaccctataacttactccctccgtttcgaaatgtttgacgccgttgactttttattacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttttatgtagacatataattttacatatcttacaaaagtttttaaataagacgaacagtcaaacatgtactaaaaagtcaacggtgtcaaacatttcgaaacggagggagtactttcctttgacatagatcgatatgtacgtagaccctctaccagtagtaaccgatcgaagggtacaccatttgtgaggctggtctgagccattggtttgtgaagcgacatgcagtttcggctagagtaattaaacaatacaaaatggtagggtgtatcatatgatcatatctgtcggtcaagcatggcgtccaaccccaccagtcgtcggtcaaccatgtctgctagctgcaggatttttataattatattggatatgcatgcatgcattcatctgaccttgatcccgtcgtcgtcagctcattgattgatcatcagttaccatgagcattacatgcatgcatggtaactatataaactaccataccttcagcgctaatgtatgtactacatccaattaaagccagctaattaattaactcacgatcatggcgttcggacgccgttcactcttcttccccgtcggcgtggcggccatcctgctgctcgccgctggccatgcagccgccgtcaacaccggcgagaccgtggtattctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctctacacctccgtcatcatctccttcctcgccgtcttcggccacggccgctactccctcgacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaagtacatccccgtgctcctctccatcggcggccagggcggcgactactccctccccaccaacgcctccgccgccgacgtcgccgaccacctctgggactccttcctcggcggcggccgcgccggcgtgccccgccccttcggcgacgcggtggtggacggcgtcgacctcttcatcgaccagggcggcgccgagcactacgacgagcttgcccggcagctgttcagccactacaagttcgagatgctgctgacggcgacgacgaggtgctcgtacccggaccaccgcctcgacatggcgctggcgacggggctgttcacgcacatccatgtccgggtgttcggcggcgacgccggctgcacgacgcaccacagggcgtcgtgggagaggtgggcggcggcgtaccccggcagcctggtgtacctcggcgtggtggcctcgccggagcaggacgccaacgcctacctgccgcgtaaggttctcttctccgacgtgctcagccacatcgtggagaagcccaactatggtgggttgatgatctgggataggtactacgataagaagaccggctactccgctggaaaagctctttaattataactcgcgatcgaccggaaattagttaaccatggtgaccaatactaattattgtgtaaggatttgtagaaaagaaggatgtaatgtgaatgatgtgcttctacatatactcgtaaataaatacacggacttatataatataagaggatgctcgtgagtggattctaaactctagagaagacatgctcttgttatttatatgtcattcaaatggttataaatttttttaaaaaatcaacaagatatattaatatatgataaatcactctacaaacgtatatatattcacaatcaaaattttaaaatttttcataactatttaaataacatgtaaacaaacagagaatttcctcgagagtttaaaatagtttcccgtaagagaatcatggaaatagatctgcttaggggatttttgctgtttttttacatgtcatccaaatagttttaaaagagttcaaccagatataaaattatgctcgtcaataaatgcacggacttactctctccgtcccatcttaagtgcaaccataagtttccgcgcaaaactttgatcgtccgttttatttaaatttttttataaatagtatttttgttgttatgagatgataaaacataaatagtattttatttgtgacttatgtttttaaattttttaaaaaaaatttaaataagacgaacggtcaaagttggacgcgaaaaaccatagctgcacttaaaatgggatggatggagtaattaataagaggatgaaagtggatataaaatctagacgagacatctccttattgttgacatgtatgtcacccaaatggtttggttatcacatcgaatatatggacacacatttaaagtattaaacgtagtctaataacaaaataaattacagattctactaggaaaccacgagacaaatttattaagcctaattaatccatcattagcaaatgtttactgtagcatcacattgtcaaatcatggcacaattaggcttaaaagattcatctcgcaatttataaacaatctatgtaattggtttttttttctacatttaatactctatgtatgtgttcaaatattcaatgtgacagtgtgaaaatttttgttttagcaactaaaccgggctaagttagaatatcgccatgcatgtgcaacgatacatgggtgacagcgcggagcaatccagagccgagccgctgttggtttctgaaccgtacctgaa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| CDS seq | atgctgctcctcgtctccggccagctcgccgccccggtcaccgccgacggctacgtcggccagctcgccgtgttctggggccgccacaaggaggagggctcgttgcgcgaggcctgcgacaccggccgttacaacatcgtcgtcatcaccttctacaacgtcttcggctaccagcgcggcaggtacggcctcgacttctccggccacccggtcgccgccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcggcggccagggcggcgagtactcgctcccgtcctcccagtcggcctccgacgtcgccgataacctctggaacgcctacctcggcggccgccgcgccggcgtgccccgccccttcggcgacgccgtcgtggacggcatcgacttcttcatcgaccagggcggcgccgaccactacgagcagcttgcccggcagctgcacggccgcggcgtgctgctgacggcgacggtgaggtgcgcgtacccggacagccggatggaggcggcgctggcgacgggggtgttcgcgcgcatccatgtccggatcttcggcgacgaccagtgcaccatgttccccaaggacgcgtgggagaagtgggcggcggcgtacccgtggtgcacggtgttcctgacggtggtggcgtcgccggagcaggacgaggggtacatgttccagaaggatctctactacggcgtgcagcagttcatcgacaaggagcccaactacggagggatcgccatctgggacagcttgctgctcgtcgtcgtgtcctgcctcgccgcgccggcgacggccgactggtacggcccgctcgccgtctactggggtcgccacaaggactacgagggctccctgagagaggcctgcgacaccggccgctacaacaccgtcatcatcaccttctacagcgtcttcggctacgtcaagggcaggtacggcctcgacatctccggccacccggtcgccgccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcggcggccagggcggcgggtactcgctcccgtcatcccagtcggccgccgacgtcgccgacaacctctggaacgcctacctcggcggccgccgcgccggcgtgccacggcccttcggcgacgcggcggtggacggcatcgacttcttcatcgaccagggcggcgccgaccactacgacgagctcgcccggcagctgcacggccgcggcgtggcgctgacggcgacggtgaggtgctcgtacccggacagccggctgcagaaggcgctggcgacggggctgttggggcggatccatgtccggatcttcggcgacaaccagtgcaccatgtcgccgttggacgcgtgggagaagtgggcggcggcgtacccgcggagcaaggtgtggctggcgctggtggcgtcgtgggagcaggacgaggtcgggtacatgttccaaaaggacctctactacggcgtgctgcagttcatcctcaacaagcccaactatggagggatcgccatctgggacagctgcctcgccggcccggcgatggccgccggaaagaccgggcagatgaccgtattctggggccgtaacaagaacgagggcaccctcaaggagacctgcgacaccggcctctacaccaccgtcgtcatctccttctacagcgtgttcggccacggccgctactggggcgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggcggcgccggcaaggactactccctcccgacctccaagtccgccgccgacgtcgccgacaacatctggaacgcccacatggacggccgccgccccggcgtgttccgccccttcggcgacgccgccgtcgacggcatcgacttcttcatcgaccagggcgcgcccgaccactacgacgacctcgcccgcaacctctacgcctacaacaagatgtaccgcgcccggacgccggtgaggttgacggcgacggtgcgctgcgcgttcccggacccgaggatgaagaaggcgctggacaccaagctgttcgagcgcatccacgtccgcttctacgacgacgccacctgctcctacaaccacgcggggctcgccggcgtcatggcgcagtggaacaagtggacggcgaggtaccccggcagccacgtctacctgggcctcgcggcggcgaacgtgccggggaagaacgacaacgtgttcatcaagcagctctactacgatctgcttcccaatgtgcagaaggcgaagaactatggcggaatcatgctctgggacaggttctacgacaagcagaccggttacggcaaaaccgtcaagtactgggcttaa
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| Protein seq | MLLLVSGQLAAPVTADGYVGQLAVFWGRHKEEGSLREACDTGRYNIVVITFYNVFGYQRGRYGLDFSGHPVAAVGADIKHCQSKGVQVLLSIGGQGGEYSLPSSQSASDVADNLWNAYLGGRRAGVPRPFGDAVVDGIDFFIDQGGADHYEQLARQLHGRGVLLTATVRCAYPDSRMEAALATGVFARIHVRIFGDDQCTMFPKDAWEKWAAAYPWCTVFLTVVASPEQDEGYMFQKDLYYGVQQFIDKEPNYGGIAIWDSLLLVVVSCLAAPATADWYGPLAVYWGRHKDYEGSLREACDTGRYNTVIITFYSVFGYVKGRYGLDISGHPVAAVGADIKHCQSKGVQVLLSIGGQGGGYSLPSSQSAADVADNLWNAYLGGRRAGVPRPFGDAAVDGIDFFIDQGGADHYDELARQLHGRGVALTATVRCSYPDSRLQKALATGLLGRIHVRIFGDNQCTMSPLDAWEKWAAAYPRSKVWLALVASWEQDEVGYMFQKDLYYGVLQFILNKPNYGGIAIWDSCLAGPAMAAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVVISFYSVFGHGRYWGDLSGHDLRVIGADIKHCQSKNIFVFLSIGGAGKDYSLPTSKSAADVADNIWNAHMDGRRPGVFRPFGDAAVDGIDFFIDQGAPDHYDDLARNLYAYNKMYRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDDATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA |
||||||||||
| Function | Xylanase inhibitor protein 1 [UniProtKB/Swiss-Prot:Q7GCM7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_11g0024400 | OsGoSa_11g0024400.01 | Chr11 | 31095951 | 31105129 | + | NAM | ||
| CDS seq | atgggcctcgtgcacgcactcctccccttagcagcagcggcattgctgctcctcgccgcggcgccgccgccggcgacggccgacgacccgggcctcgccgtctactggggccgccacaaggaggaaggctctctccgtgaggcctgcgacaccggccgctacaccaccgtcatcatcaccttctacgacgtcttcggccacggccgctactccctcgacatctccggccacccgctcgccgccgttggcgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcggcggccagggcggcgcctactccctccccaccaacgcctccgccgccgacgtcgccgacaacctctggaacgcctacctcggcggccaccgcgccggcgtggcgcgacccttcggcgacgacgcggccgtggacggcatcgacttcttcatcgaccagggcggcgccgaccactacgacgacctcgcccggcggctcgacggctacaacaagtactaccgcggcagggtcggcgtggtgctgacggcgacgacgaggtgctcgtacccggaccaccggctggagaaggcgctggcgacgggggtgttcgcgcgcatccatgtgaggatgttcggcgacgagcagtgcaccatgtcgccgaggtactcgtgggagaagtgggcggcggcgttccccggcagcaaggtgtacatcgggctggtggcgtcgccggagcaggacagcgcgtggatgtttcagaaggatctctactacgagatgctgcagttcgtcaggtcgcttcccaactatggtggtttggccatctacgacaggtacttcgacaagaaggccaactacactggtcaggccgccgtcaacaccggcgagaccgtggtattctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctctacacctccgtcatcatctccttcctcgccgtcttcggccacggccgctactccctcgacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaagtacatccccgtgctcctctccatcggcggccagggcggcgactactccctccccaccaacgcctccgccgccgacgtcgccgaccacctctgggactccttcctcggcggcggccgcgccggcgtgccccgccccttcggcgacgcggtggtggacggcgtcgacctcttcatcgaccagggcggcgccgagcactacgacgagcttgcccggcagctgttcagccactacaagttcgagatgctgctgacggcgacgacgaggtgctcgtacccggaccaccgcctcgacatggcgctggcgacggggctgttcacgcacatccatgtccgggtgttcggcggcgacgccggctgcacgacgcaccacagggcgtcgtgggagaggtgggcggcggcgtaccccggcagcctggtgtacctcggcgtggtggcctcgccggagcaggacgccaacgcctacctgccgcgtaaggttctcttctccgacgtgctcagccacatcgtggagaagcccaactatgaccagaccgccgtaatctggggccgccacggcgacgagggcaccctccgtgaggcctgcgacaccggccactacaacaccgtcatcatcgccttcctcagcgtgttcggccacggccgctactccctcgacctctccggccacgacatccgccgcgtcggcaacgacatcaagcactgccagcgcaagggcatcgtcgtgctcctctccatcggcggccagggcggcgactactccctcccctcctcccgctctgccgccgacgtcgccgacaacctctggaacgcgttcctcgccggccgccgcaagggcgtgctccgccccttcggcaacgcggtggtcgacggcatcgacttcttcatcgaccggggctccggcgaccactacgacgagctggccaggaatctctacagctacagaaacaacaaggggaagggggtgatgctgacggcgacgccgcggtgcaggttcccggaccggcgggtggagaaggcgctggcgacgggggtgttcgcgcgcatccacgtgaggatgttcggcgacgacgtgaactgcacggcggcgccgagggagtcgtgggagaagtgggcggcggcgtacccggcgagccaggtgtacctcgggctggtggcctcgtcggagcaggacccgggatacctgtcgcccaagccactctactacacgctggtgatgtacatcagagacaggctcaactacggtggcaagatgatctgggacaggctctcctccccgtag
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| Protein seq | MGLVHALLPLAAAALLLLAAAPPPATADDPGLAVYWGRHKEEGSLREACDTGRYTTVIITFYDVFGHGRYSLDISGHPLAAVGADIKHCQSRGITVLLSIGGQGGAYSLPTNASAADVADNLWNAYLGGHRAGVARPFGDDAAVDGIDFFIDQGGADHYDDLARRLDGYNKYYRGRVGVVLTATTRCSYPDHRLEKALATGVFARIHVRMFGDEQCTMSPRYSWEKWAAAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYTGQAAVNTGETVVFWGRNKDEGSLREACDTGLYTSVIISFLAVFGHGRYSLDLSGHDVSAVGADIKHCQSKYIPVLLSIGGQGGDYSLPTNASAADVADHLWDSFLGGGRAGVPRPFGDAVVDGVDLFIDQGGAEHYDELARQLFSHYKFEMLLTATTRCSYPDHRLDMALATGLFTHIHVRVFGGDAGCTTHHRASWERWAAAYPGSLVYLGVVASPEQDANAYLPRKVLFSDVLSHIVEKPNYDQTAVIWGRHGDEGTLREACDTGHYNTVIIAFLSVFGHGRYSLDLSGHDIRRVGNDIKHCQRKGIVVLLSIGGQGGDYSLPSSRSAADVADNLWNAFLAGRRKGVLRPFGNAVVDGIDFFIDRGSGDHYDELARNLYSYRNNKGKGVMLTATPRCRFPDRRVEKALATGVFARIHVRMFGDDVNCTAAPRESWEKWAAAYPASQVYLGLVASSEQDPGYLSPKPLYYTLVMYIRDRLNYGGKMIWDRLSSP
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_11g0024400 | OsGoSa_11g0024400.02 | Chr11 | 31105135 | 31120436 | + | NAM | ||
| CDS seq | atgctgctcctcgtctccggccagctcgccgccccggtcaccgccgacggctacgtcggccagctcgccgtgttctggggccgccacaaggaggagggctcgttgcgcgaggcctgcgacaccggccgttacaacatcgtcgtcatcaccttctacaacgtcttcggctaccagcgcggcaggtacggcctcgacttctccggccacccggtcgccgccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcggcggccagggcggcgagtactcgctcccgtcctcccagtcggcctccgacgtcgccgataacctctggaacgcctacctcggcggccgccgcgccggcgtgccccgccccttcggcgacgccgtcgtggacggcatcgacttcttcatcgaccagggcggcgccgaccactacgagcagcttgcccggcagctgcacggccgcggcgtgctgctgacggcgacggtgaggtgcgcgtacccggacagccggatggaggcggcgctggcgacgggggtgttcgcgcgcatccatgtccggatcttcggcgacgaccagtgcaccatgttccccaaggacgcgtgggagaagtgggcggcggcgtacccgtggtgcacggtgttcctgacggtggtggcgtcgccggagcaggacgaggggtacatgttccagaaggatctctactacggcgtgcagcagttcatcgacaaggagcccaactacggagggatcgccatctgggacagcttgctgctcgtcgtcgtgtcctgcctcgccgcgccggcgacggccgactggtacggcccgctcgccgtctactggggtcgccacaaggactacgagggctccctgagagaggcctgcgacaccggccgctacaacaccgtcatcatcaccttctacagcgtcttcggctacgtcaagggcaggtacggcctcgacatctccggccacccggtcgccgccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcggcggccagggcggcgggtactcgctcccgtcatcccagtcggccgccgacgtcgccgacaacctctggaacgcctacctcggcggccgccgcgccggcgtgccacggcccttcggcgacgcggcggtggacggcatcgacttcttcatcgaccagggcggcgccgaccactacgacgagctcgcccggcagctgcacggccgcggcgtggcgctgacggcgacggtgaggtgctcgtacccggacagccggctgcagaaggcgctggcgacggggctgttggggcggatccatgtccggatcttcggcgacaaccagtgcaccatgtcgccgttggacgcgtgggagaagtgggcggcggcgtacccgcggagcaaggtgtggctggcgctggtggcgtcgtgggagcaggacgaggtcgggtacatgttccaaaaggacctctactacggcgtgctgcagttcatcctcaacaagcccaactatggagggatcgccatctgggacagctgcctcgccggcccggcgatggccgccggaaagaccgggcagatgaccgtattctggggccgtaacaagaacgagggcaccctcaaggagacctgcgacaccggcctctacaccaccgtcgtcatctccttctacagcgtgttcggccacggccgctactggggcgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggcggcgccggcaaggactactccctcccgacctccaagtccgccgccgacgtcgccgacaacatctggaacgcccacatggacggccgccgccccggcgtgttccgccccttcggcgacgccgccgtcgacggcatcgacttcttcatcgaccagggcgcgcccgaccactacgacgacctcgcccgcaacctctacgcctacaacaagatgtaccgcgcccggacgccggtgaggttgacggcgacggtgcgctgcgcgttcccggacccgaggatgaagaaggcgctggacaccaagctgttcgagcgcatccacgtccgcttctacgacgacgccacctgctcctacaaccacgcggggctcgccggcgtcatggcgcagtggaacaagtggacggcgaggtaccccggcagccacgtctacctgggcctcgcggcggcgaacgtgccggggaagaacgacaacgtgttcatcaagcagctctactacgatctgcttcccaatgtgcagaaggcgaagaactatggcggaatcatgctctgggacaggttctacgacaagcagaccggttacggcaaaaccgtcaagtactgggcttaa
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| Protein seq | MLLLVSGQLAAPVTADGYVGQLAVFWGRHKEEGSLREACDTGRYNIVVITFYNVFGYQRGRYGLDFSGHPVAAVGADIKHCQSKGVQVLLSIGGQGGEYSLPSSQSASDVADNLWNAYLGGRRAGVPRPFGDAVVDGIDFFIDQGGADHYEQLARQLHGRGVLLTATVRCAYPDSRMEAALATGVFARIHVRIFGDDQCTMFPKDAWEKWAAAYPWCTVFLTVVASPEQDEGYMFQKDLYYGVQQFIDKEPNYGGIAIWDSLLLVVVSCLAAPATADWYGPLAVYWGRHKDYEGSLREACDTGRYNTVIITFYSVFGYVKGRYGLDISGHPVAAVGADIKHCQSKGVQVLLSIGGQGGGYSLPSSQSAADVADNLWNAYLGGRRAGVPRPFGDAAVDGIDFFIDQGGADHYDELARQLHGRGVALTATVRCSYPDSRLQKALATGLLGRIHVRIFGDNQCTMSPLDAWEKWAAAYPRSKVWLALVASWEQDEVGYMFQKDLYYGVLQFILNKPNYGGIAIWDSCLAGPAMAAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVVISFYSVFGHGRYWGDLSGHDLRVIGADIKHCQSKNIFVFLSIGGAGKDYSLPTSKSAADVADNIWNAHMDGRRPGVFRPFGDAAVDGIDFFIDQGAPDHYDDLARNLYAYNKMYRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDDATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_11g0024400 | OsGoSa_11g0024400.03 | Chr11 | 31105048 | 31106056 | + | IsoSeq | ||
| CDS seq | atgtccggatcttcggcgacgaccagtgcaccatgttccccaaggacgcgtgggagaagtgggcggcggcgtacccgtggtgcacggtgt |
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| Protein seq | MSGSSATTSAPCSPRTRGRSGRRRTRGARC |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0701600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g47520 | RBH | 0.0 | 0.0 | 0.260139 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0701800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024780 | RBH | 0.0 | 6.974366 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024770 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0024260 | RBH | 0.0 | 1.597823 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0024310 | RBH | 0.0 | 0.054235 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024600 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0449300 | RBH | 0 | 0.9969555 | 11.884694 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0025130 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0445100 | RBH | 0.1282095 | 26.754856 | 0.0106765 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024910 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0025020 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0024370 | SBH | 0.110103 | 23.995518 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0024120 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024510 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024490 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024700 | RBH | 0.0 | 0.000000 | 0.0 |
