Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_11g0012570 | OGI:11042270 | 15/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr11:16264280-16267302 | ||||||||
| Gene Symbol | RLCK327, OsRLCK327 | ||||||||||
| DNA seq | cttttatgccaccccgtgacatcaccgttggcattgcacgaaatccaaatgaatacaacgtaaacagcttctgcccgccgggcccccatggccccatcatcggccatccgagtcaaccgagtgagccacccaccataccagcagctcccactcgaggcggacatcacattatcgtctcgtcttcccacctgcacctgccgcgctctcccccctcgattcccatttgatcccacacctccaccaactagctgccacgctcgctttcccctgcgacatgcgtgatgtgtgggcgctccacttgttaaccatctcgcgcgcacgccaggctcggctcctcgatcgacgccatgtcgctgcgccggctctgcttcgtgctgcccatggacgccgacgaggtggtggtggtagctggcgctgctggtgaggagcagcctcgacgacgagggatggcagcgagcgggaggctggcgtcgtacgtccgccgcaaggtcggccgcgcgctgcggtgcgggctctgcggcgcctggtgccaccaccgctcgtcgggagtctgcagcttcgaggacatcgccggcgtggacgcggttggcgcggggaagctcagcggaggcgcgggcgggagccccaggatcttcagctactcggagctctacatcgggaccagtgggttcagcgacacggagatcctgggcagcggagggttcgggcgggtgtaccgcgccgtgctgccgagcgacggcacgacggtggccgtcaagtgcgtcgccggccgcggcgaccggttcgagaagtccttcctggcggagctggcggcggtggcgcggctgcggcaccgcaacctcgtccgcctccgcgggtggtgcgtgcaggacgaggaggagctgctgctggtgtacgactacatgccgaaccgcagcctcgaccgcctcctcttcagaccggcggcggcggcggcgcccgccgcgtcggctccggcgctgagctgggaccggcgacgccgcatcgtctccggccttgccgctgccctgttctacctgcacgagcagctcgacacgcagatcatacaccgggacgtgaagaccagcaacgtcatgctggactccgagtacaacgcccggctcggcgacttcggcctcgcccggtggctcgagcacgccatgtccggcgaggacgcgccgccgccgcagctggaggtgtccccgtcgcctcattccgcgcggtcgtcgtcatttgcttccgcgaattaccagttccggctgatggacaccagccggataggcggcaccatcgggtaccttccgccggagagcttccagcgccgggccatggcaaccgccaagtccgacgtgttcagcttcgggatcgtcctcctggaggtggccacagggcggcgagcggtcgacctcgcgtaccccgacgaccaaatcttcatgctggattgggtgcgtcggttgtccgatgaggggaagctgctcgacgccggcgaccgcaagctgccggacggcagctacccgctgttcgacatgggccgtctcatacacctcggtctcctctgctccctgcacgatcctaggtctcgtcccagcatgaagtgggtggtggagaacctctccggcagctgctccggcgacctgccaccgcttccgtccttcctagctctcccaaagtacgtctctctcacttccccctccgattccggcacgacgacgaacgccacggacagcacggtcacctctgcgtcgaagctctacggcacggcggccgggacgaccatttacctcaccgcggagaacggccaccgctccagaggtggcttggctgacaacagcggcggcagcagccagcgatcgacgcggccgctggtggtgatccccagcgtcgacactccccgtgagatatcgtacaaggagatcgtcgcgatcaccaacaacttctccgagtcgcagatggtggcggagctcgacttcgggacagggtacgagggcttcttggataacggctatggcggcaatggcgcccgccgcgaccgcgtccatgtcctcgtgaagcggctcggcatgaagacgtgcccggcgctgcgcgtccggttcgccaacgagctccgcaacctcgcgaagctgcagcaccggaacctcgtccagctgcgcggctggtgcacggagcacggcgagatgctcgtcgtctacgactactccccggggaacctcctgagccaccacctcctccggcgcgatggcgcaggcgccgccgccgtcctcccgtggcgccaccggtacagcatcgtcaaggccctcgcgtccgcagtcctgtacctgcacgaggagtgggacgagcaggtcatccaccgcaacatcacgtcggcggcggtgttcctggaccccgaccgtaacccgcggctcgggagcttcgcgctggccgagttcctgtcaaggaacgagagccacggcggcgcgggcgggcaccacgttgccctgcccgccaccagctctgctgcgcggggcatcttcggctacatgtcgccggagtacatggagaccggcgaggccaccgccatggccgacgtctacagcttcggcgtggtggtgctggaggtggtgactggcgagatggcggtggacgtgaggtcgccggaggtccttcttgtcaggagagcgcagcggtggaaggagcagagccgccccgtcgaggccatcgtggacagacggctggacggccaggttgatcgcccggagctcgagcggttggtgaggctcggcatggcgtgcacccagtctgacccggcggcgcgaccgacgatgaggaagatagtgagcatcatggatggcaatgacgagatcttgaagaaattcgagcagaggaagcagcagagcaaggaagagtgggagaccacaaatgctgctgctctgtccttagtaagaagactccatgctcttgcgatacactgaacacaacgtcaatatgtatatattttctctaatagagaaataaattctgttattatagttggacacgatatttttata
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| CDS seq | atgtcgctgcgccggctctgcttcgtgctgcccatggacgccgacgaggtggtggtggtagctggcgctgctggtgaggagcagcctcgacgacgagggatggcagcgagcgggaggctggcgtcgtacgtccgccgcaaggtcggccgcgcgctgcggtgcgggctctgcggcgcctggtgccaccaccgctcgtcgggagtctgcagcttcgaggacatcgccggcgtggacgcggttggcgcggggaagctcagcggaggcgcgggcgggagccccaggatcttcagctactcggagctctacatcgggaccagtgggttcagcgacacggagatcctgggcagcggagggttcgggcgggtgtaccgcgccgtgctgccgagcgacggcacgacggtggccgtcaagtgcgtcgccggccgcggcgaccggttcgagaagtccttcctggcggagctggcggcggtggcgcggctgcggcaccgcaacctcgtccgcctccgcgggtggtgcgtgcaggacgaggaggagctgctgctggtgtacgactacatgccgaaccgcagcctcgaccgcctcctcttcagaccggcggcggcggcggcgcccgccgcgtcggctccggcgctgagctgggaccggcgacgccgcatcgtctccggccttgccgctgccctgttctacctgcacgagcagctcgacacgcagatcatacaccgggacgtgaagaccagcaacgtcatgctggactccgagtacaacgcccggctcggcgacttcggcctcgcccggtggctcgagcacgccatgtccggcgaggacgcgccgccgccgcagctggaggtgtccccgtcgcctcattccgcgcggtcgtcgtcatttgcttccgcgaattaccagttccggctgatggacaccagccggataggcggcaccatcgggtaccttccgccggagagcttccagcgccgggccatggcaaccgccaagtccgacgtgttcagcttcgggatcgtcctcctggaggtggccacagggcggcgagcggtcgacctcgcgtaccccgacgaccaaatcttcatgctggattgggtgcgtcggttgtccgatgaggggaagctgctcgacgccggcgaccgcaagctgccggacggcagctacccgctgttcgacatgggccgtctcatacacctcggtctcctctgctccctgcacgatcctaggtctcgtcccagcatgaagtgggtggtggagaacctctccggcagctgctccggcgacctgccaccgcttccgtccttcctagctctcccaaagtacgtctctctcacttccccctccgattccggcacgacgacgaacgccacggacagcacggtcacctctgcgtcgaagctctacggcacggcggccgggacgaccatttacctcaccgcggagaacggccaccgctccagaggtggcttggctgacaacagcggcggcagcagccagcgatcgacgcggccgctggtggtgatccccagcgtcgacactccccgtgagatatcgtacaaggagatcgtcgcgatcaccaacaacttctccgagtcgcagatggtggcggagctcgacttcgggacagggtacgagggcttcttggataacggctatggcggcaatggcgcccgccgcgaccgcgtccatgtcctcgtgaagcggctcggcatgaagacgtgcccggcgctgcgcgtccggttcgccaacgagctccgcaacctcgcgaagctgcagcaccggaacctcgtccagctgcgcggctggtgcacggagcacggcgagatgctcgtcgtctacgactactccccggggaacctcctgagccaccacctcctccggcgcgatggcgcaggcgccgccgccgtcctcccgtggcgccaccggtacagcatcgtcaaggccctcgcgtccgcagtcctgtacctgcacgaggagtgggacgagcaggtcatccaccgcaacatcacgtcggcggcggtgttcctggaccccgaccgtaacccgcggctcgggagcttcgcgctggccgagttcctgtcaaggaacgagagccacggcggcgcgggcgggcaccacgttgccctgcccgccaccagctctgctgcgcggggcatcttcggctacatgtcgccggagtacatggagaccggcgaggccaccgccatggccgacgtctacagcttcggcgtggtggtgctggaggtggtgactggcgagatggcggtggacgtgaggtcgccggaggtccttcttgtcaggagagcgcagcggtggaaggagcagagccgccccgtcgaggccatcgtggacagacggctggacggccaggttgatcgcccggagctcgagcggttggtgaggctcggcatggcgtgcacccagtctgacccggcggcgcgaccgacgatgaggaagatagtgagcatcatggatggcaatgacgagatcttgaagaaattcgagcagaggaagcagcagagcaaggaagagtgggagaccacaaatgctgctgctctgtccttagtaagaagactccatgctcttgcgatacactga
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| Protein seq | MSLRRLCFVLPMDADEVVVVAGAAGEEQPRRRGMAASGRLASYVRRKVGRALRCGLCGAWCHHRSSGVCSFEDIAGVDAVGAGKLSGGAGGSPRIFSYSELYIGTSGFSDTEILGSGGFGRVYRAVLPSDGTTVAVKCVAGRGDRFEKSFLAELAAVARLRHRNLVRLRGWCVQDEEELLLVYDYMPNRSLDRLLFRPAAAAAPAASAPALSWDRRRRIVSGLAAALFYLHEQLDTQIIHRDVKTSNVMLDSEYNARLGDFGLARWLEHAMSGEDAPPPQLEVSPSPHSARSSSFASANYQFRLMDTSRIGGTIGYLPPESFQRRAMATAKSDVFSFGIVLLEVATGRRAVDLAYPDDQIFMLDWVRRLSDEGKLLDAGDRKLPDGSYPLFDMGRLIHLGLLCSLHDPRSRPSMKWVVENLSGSCSGDLPPLPSFLALPKYVSLTSPSDSGTTTNATDSTVTSASKLYGTAAGTTIYLTAENGHRSRGGLADNSGGSSQRSTRPLVVIPSVDTPREISYKEIVAITNNFSESQMVAELDFGTGYEGFLDNGYGGNGARRDRVHVLVKRLGMKTCPALRVRFANELRNLAKLQHRNLVQLRGWCTEHGEMLVVYDYSPGNLLSHHLLRRDGAGAAAVLPWRHRYSIVKALASAVLYLHEEWDEQVIHRNITSAAVFLDPDRNPRLGSFALAEFLSRNESHGGAGGHHVALPATSSAARGIFGYMSPEYMETGEATAMADVYSFGVVVLEVVTGEMAVDVRSPEVLLVRRAQRWKEQSRPVEAIVDRRLDGQVDRPELERLVRLGMACTQSDPAARPTMRKIVSIMDGNDEILKKFEQRKQQSKEEWETTNAAALSLVRRLHALAIH |
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| Function | Receptor like protein kinase S.2 [UniProtKB/Swiss-Prot:O48837] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_11g0012570 | OsGoSa_11g0012570.01 | Chr11 | 16264280 | 16267302 | + | NAM | ||
| CDS seq | atgtcgctgcgccggctctgcttcgtgctgcccatggacgccgacgaggtggtggtggtagctggcgctgctggtgaggagcagcctcgacgacgagggatggcagcgagcgggaggctggcgtcgtacgtccgccgcaaggtcggccgcgcgctgcggtgcgggctctgcggcgcctggtgccaccaccgctcgtcgggagtctgcagcttcgaggacatcgccggcgtggacgcggttggcgcggggaagctcagcggaggcgcgggcgggagccccaggatcttcagctactcggagctctacatcgggaccagtgggttcagcgacacggagatcctgggcagcggagggttcgggcgggtgtaccgcgccgtgctgccgagcgacggcacgacggtggccgtcaagtgcgtcgccggccgcggcgaccggttcgagaagtccttcctggcggagctggcggcggtggcgcggctgcggcaccgcaacctcgtccgcctccgcgggtggtgcgtgcaggacgaggaggagctgctgctggtgtacgactacatgccgaaccgcagcctcgaccgcctcctcttcagaccggcggcggcggcggcgcccgccgcgtcggctccggcgctgagctgggaccggcgacgccgcatcgtctccggccttgccgctgccctgttctacctgcacgagcagctcgacacgcagatcatacaccgggacgtgaagaccagcaacgtcatgctggactccgagtacaacgcccggctcggcgacttcggcctcgcccggtggctcgagcacgccatgtccggcgaggacgcgccgccgccgcagctggaggtgtccccgtcgcctcattccgcgcggtcgtcgtcatttgcttccgcgaattaccagttccggctgatggacaccagccggataggcggcaccatcgggtaccttccgccggagagcttccagcgccgggccatggcaaccgccaagtccgacgtgttcagcttcgggatcgtcctcctggaggtggccacagggcggcgagcggtcgacctcgcgtaccccgacgaccaaatcttcatgctggattgggtgcgtcggttgtccgatgaggggaagctgctcgacgccggcgaccgcaagctgccggacggcagctacccgctgttcgacatgggccgtctcatacacctcggtctcctctgctccctgcacgatcctaggtctcgtcccagcatgaagtgggtggtggagaacctctccggcagctgctccggcgacctgccaccgcttccgtccttcctagctctcccaaagtacgtctctctcacttccccctccgattccggcacgacgacgaacgccacggacagcacggtcacctctgcgtcgaagctctacggcacggcggccgggacgaccatttacctcaccgcggagaacggccaccgctccagaggtggcttggctgacaacagcggcggcagcagccagcgatcgacgcggccgctggtggtgatccccagcgtcgacactccccgtgagatatcgtacaaggagatcgtcgcgatcaccaacaacttctccgagtcgcagatggtggcggagctcgacttcgggacagggtacgagggcttcttggataacggctatggcggcaatggcgcccgccgcgaccgcgtccatgtcctcgtgaagcggctcggcatgaagacgtgcccggcgctgcgcgtccggttcgccaacgagctccgcaacctcgcgaagctgcagcaccggaacctcgtccagctgcgcggctggtgcacggagcacggcgagatgctcgtcgtctacgactactccccggggaacctcctgagccaccacctcctccggcgcgatggcgcaggcgccgccgccgtcctcccgtggcgccaccggtacagcatcgtcaaggccctcgcgtccgcagtcctgtacctgcacgaggagtgggacgagcaggtcatccaccgcaacatcacgtcggcggcggtgttcctggaccccgaccgtaacccgcggctcgggagcttcgcgctggccgagttcctgtcaaggaacgagagccacggcggcgcgggcgggcaccacgttgccctgcccgccaccagctctgctgcgcggggcatcttcggctacatgtcgccggagtacatggagaccggcgaggccaccgccatggccgacgtctacagcttcggcgtggtggtgctggaggtggtgactggcgagatggcggtggacgtgaggtcgccggaggtccttcttgtcaggagagcgcagcggtggaaggagcagagccgccccgtcgaggccatcgtggacagacggctggacggccaggttgatcgcccggagctcgagcggttggtgaggctcggcatggcgtgcacccagtctgacccggcggcgcgaccgacgatgaggaagatagtgagcatcatggatggcaatgacgagatcttgaagaaattcgagcagaggaagcagcagagcaaggaagagtgggagaccacaaatgctgctgctctgtccttagtaagaagactccatgctcttgcgatacactga
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| Protein seq | MSLRRLCFVLPMDADEVVVVAGAAGEEQPRRRGMAASGRLASYVRRKVGRALRCGLCGAWCHHRSSGVCSFEDIAGVDAVGAGKLSGGAGGSPRIFSYSELYIGTSGFSDTEILGSGGFGRVYRAVLPSDGTTVAVKCVAGRGDRFEKSFLAELAAVARLRHRNLVRLRGWCVQDEEELLLVYDYMPNRSLDRLLFRPAAAAAPAASAPALSWDRRRRIVSGLAAALFYLHEQLDTQIIHRDVKTSNVMLDSEYNARLGDFGLARWLEHAMSGEDAPPPQLEVSPSPHSARSSSFASANYQFRLMDTSRIGGTIGYLPPESFQRRAMATAKSDVFSFGIVLLEVATGRRAVDLAYPDDQIFMLDWVRRLSDEGKLLDAGDRKLPDGSYPLFDMGRLIHLGLLCSLHDPRSRPSMKWVVENLSGSCSGDLPPLPSFLALPKYVSLTSPSDSGTTTNATDSTVTSASKLYGTAAGTTIYLTAENGHRSRGGLADNSGGSSQRSTRPLVVIPSVDTPREISYKEIVAITNNFSESQMVAELDFGTGYEGFLDNGYGGNGARRDRVHVLVKRLGMKTCPALRVRFANELRNLAKLQHRNLVQLRGWCTEHGEMLVVYDYSPGNLLSHHLLRRDGAGAAAVLPWRHRYSIVKALASAVLYLHEEWDEQVIHRNITSAAVFLDPDRNPRLGSFALAEFLSRNESHGGAGGHHVALPATSSAARGIFGYMSPEYMETGEATAMADVYSFGVVVLEVVTGEMAVDVRSPEVLLVRRAQRWKEQSRPVEAIVDRRLDGQVDRPELERLVRLGMACTQSDPAARPTMRKIVSIMDGNDEILKKFEQRKQQSKEEWETTNAAALSLVRRLHALAIH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.558542 | 12.511660 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0445300 | RBH | 0.343218 | 0.071737 | 2.299752 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g25860 | RBH | 0.215712 | 0.044842 | 0.550199 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0445300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0012810 | RBH | 0.062844 | 7.645797 | 3.355317 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0012800 | RBH | 0.0 | 3.189893 | 1.335300 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0012760 | RBH | 0.682269 | 3.658192 | 3.161286 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0012490 | RBH | 0.094049 | 0.214509 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0012860 | RBH | 1.038870 | 2.284555 | 5.415072 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0012770 | RBH | 0.032007 | 0.338735 | 0.202900 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0237400 | RBH | 4.199752 | 20.2198515 | 0.7253855 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0012840 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0012940 | RBH | 0.093683 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0012400 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0012450 | RBH | 0.032912 | 0.0 | 0.494623 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0012770 | RBH | 0.347653 | 3.873653 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G012640 | RBH | 0.103556 | 0.0 | 0.818169 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0012740 | RBH | 0.0 | 3.922971 | 2.705666 |
