Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_11g0010920 | OGI:11020990 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr11:11279924-11281490 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcatttttcctctgtgtcaagcctgggcatcttcttccttctttggcctcccactctagactcagctacctcctcaggagctagcccgcacatgtccactcccatcttttgcaatagagagatagagcaatcagatggagaggaatcggagtgaacatcatcatagacatttgtattaaaatcagtttccttcatgctagtatcatcaaagattttttctatacctgccaactctttaagctttcttgcagatttaccctcggcttaccaatgcccattctaggatccaccttcagttctgacccttctttgtttagttgaagtcttgcactctgcctcctgtagggattgtaaagaagggttttccatccctttttttgacaggagctttgggcagcatcagaggaacagctgcttggcaaacttggctggatggaggtagaatagccaaaggcaagacttcaagaatatccatatcttcatgggcctaaggttggttctgaggaggataactagacttaggaaagtctagagtccaggcagcatccagcttattaacttgacgggagaaatcgaacattgtcttctttggcaggactagagctgtgaaggggcttggcacttgaatagcagcagggatagagttacaggccaggaactgatgcatagtacccctttctctgcacatgagttcaatcttctcattgatgcctttcatgggatagaaataggggaccttgggggtactcatttctagctattttctccaatattgctaaaaaaaactctgaacctgtgcatcctggtcaaattcttgcactttttttccctttgtctgtatcaggaacaaaggggaccactacattttccttcccagggctagcagcagccgattcaattaggccatcagggttaacttccataatctagcccatagggtggtcttggccccaagcatcttccacctgctcatttgctgcattctgttgctggactaaatcattccagtcgcctgcacctgcctggggatgacccattcccatttgccaaatttggccaccatcaggatcctcatcatcatcagcagcaggatttggctgtgggccaactggaggcaaatcttcatcgggcggcatattgatgaagtccccttccaaaagaaaaactaaaattgtccaagattcaccaccaccacccattcccactggatcatgcaggacgattttcctcggcacagagtcattgtctttaaatttagctctaatgagcaccctccccttcatctgatctctttcaagccaataagagagctggccaaaagaggctgtggcaaggttgagatgattccaatcaataaaatccaacgggaagtccagaaagaggaaccatccgtccctgttgtactgagaagctctccaattcggcccttgatcatgctttacaaatgtgatatacacaaatggctcactatggacaagttcatctctatgcatagcagagcggagctgaaacatgcctactgcagaagcatggcggtagctgtttctaacctcgaaaagacgctcat
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| CDS seq | atgaagatatggatattcttgaagtcttgcctttggctattctacctccatccagccaactgttcctctgatgctgcccaaagctcctgtcaaaaaaagggatggaaaacccttctttacaatccctacaggaggcagagtgcaagacttcaactaaacaaagaagggtcagaactgaaggtggatcctagaatgggcattggtaagccgagggaaactgattttaatacaaatgtctatgatgatgttcactccgattcctctccatctgattgctctatctctctattgcaaaagatgggagtggacatgtgcgggctagctcctgaggaggtagctgagtctagagtgggaggccaaagaaggaagaagatgcccaggcttgacacagaggaaaaatga
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| Protein seq | MKIWIFLKSCLWLFYLHPANCSSDAAQSSCQKKGWKTLLYNPYRRQSARLQLNKEGSELKVDPRMGIGKPRETDFNTNVYDDVHSDSSPSDCSISLLQKMGVDMCGLAPEEVAESRVGGQRRKKMPRLDTEEK |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_11g0010920 | OsGoSa_11g0010920.03 | Chr11 | 11279924 | 11280406 | - | NAM | ||
| CDS seq | atgaagatatggatattcttgaagtcttgcctttggctattctacctccatccagccaactgttcctctgatgctgcccaaagctcctgtcaaaaaaagggatggaaaacccttctttacaatccctacaggaggcagagtgcaagacttcaactaaacaaagaagggtcagaactgaaggtggatcctagaatgggcattggtaagccgagggaaactgattttaatacaaatgtctatgatgatgttcactccgattcctctccatctgattgctctatctctctattgcaaaagatgggagtggacatgtgcgggctagctcctgaggaggtagctgagtctagagtgggaggccaaagaaggaagaagatgcccaggcttgacacagaggaaaaatga
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| Protein seq | MKIWIFLKSCLWLFYLHPANCSSDAAQSSCQKKGWKTLLYNPYRRQSARLQLNKEGSELKVDPRMGIGKPRETDFNTNVYDDVHSDSSPSDCSISLLQKMGVDMCGLAPEEVAESRVGGQRRKKMPRLDTEEK |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_11g0010920 | OsGoSa_11g0010920.01 | Chr11 | 11280850 | 11281490 | - | NAM | ||
| CDS seq | atgagcgtcttttcgagagatcagatgaaggggagggtgctcattagagctaaatttaaagacaatgactctgtgccgaggaaaatcgtcctgcatgatccagtgggaatgggtggtggtggtgaatcttggacaattttagtttttcttttggaaggggacttcatcaatatgccgcccgatgaagatttgcctccagttggcccacagccaaatcctgctgctgatgatgatgaggatcctgatggtggccaaatttggcaaatgggaatgggtcatccccaggcaggtgcaggcgactggaatgatttagtccagcaacagaatgcagcaaatgagcaggtggaagatgcttggggccaagaccaccctatgggctag
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| Protein seq | MSVFSRDQMKGRVLIRAKFKDNDSVPRKIVLHDPVGMGGGGESWTILVFLLEGDFINMPPDEDLPPVGPQPNPAADDDEDPDGGQIWQMGMGHPQAGAGDWNDLVQQQNAANEQVEDAWGQDHPMG |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_11g0010920 | OsGoSa_11g0010920.02 | Chr11 | 11280411 | 11280846 | - | NAM | ||
| CDS seq | atggaagttaaccctgatggcctaattgaatcggctgctgctagccctgggaaggaaaatgtagtggtcccctttgttcctgatacagacaaagggaaaaaaaaaatgagtacccccaaggtcccctatttctatcccatgaaaggcatcaatgagaagattgaactcatgtgcagagaaaggggtactatgcatcagttcctggcctgtaactctatccctgctgctattcaagtgccaagccccttcacagctctagtcctgccaaagaagacaatgttcgatttctcccgtcaagttaataagctggatgctgcctggactctagactttcctaagtctagttatcctcctcagaaccaaccttag
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| Protein seq | MEVNPDGLIESAAASPGKENVVVPFVPDTDKGKKKMSTPKVPYFYPMKGINEKIELMCRERGTMHQFLACNSIPAAIQVPSPFTALVLPKKTMFDFSRQVNKLDAAWTLDFPKSSYPPQNQP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0234001 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g18919 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0234001 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0011820 | SBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0011840 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0011760 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0011510 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0011850 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0168700 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0012730 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0170700 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0011850 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0011260 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0010700 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0010990 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G010800 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
