Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_11g0006670 | OGI:11016470 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr11:5483097-5488519 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | agtaacctttttagccctgtttcgcaaatgggttatgagaggtgggattgggacatggaaatgaatggatggttagggtaaaatgaggtgagaaaaatggatggctaggattgagtgttaccctttcgtggatggaaaatccttccccaatcaaattcgctaaatgtattcttgtttttggaacaggcattggacctatgtacagagctatgtctcttagcatgtcatccactttgtacagccctgggatgtgggatggttgtatgaatgccttcctcaccaaatcatcaaagtaatcagtcgcaacattctctatgctatttttcatacaattttcactgacgacgacacagttgttcatccaatagcttatcattcctcccttgtgaaggtccagcgagggtatgtacccaacaccccaaagcagcgttgcaggtgtttgggaagaagcttacaacccagaataaatggagtaacaaacctggaactggatgcgacgaactgttgacagcgattcagaacaatgtaccagtacttctcattgaggttttctcgaagcagtccactcacaacttttgcagctaaagggctgcacaccctcaatgtcacagcgatcttctttccaataacaagtaatttctggtattcttcagggtgtgcaccacccagggcattttccatgaacatgcagccgagatcttccattgccaggaaccctacaggtaagttttcatgcttattgatcttagttgccagatgttggtacatagtggtaatgatggccttgcttcctgctctacttttcatgaacagtgtatcgagtatgccattcattcccctggggtagctagaagcaccatcaagaacaagtagaaatctctccattcttagcctttctgatatcccatggatcacacttgaaagattaatggttacgttagaactcaaaccaagcttcttgcacaatgactttaccaaggccatggctggactagtatattctctgcaattcacccatattatcattgagaaatggctcctcaccttgcgatcgtcgcatacgagccgcgcaatcgtggttttacctactcctttgacaccccaaatgggaagcacacagccatctggagaggatgatccattcttgtctatgtgaagcaagaattcgatggcctgtttcctctcatcgactctgccaactaccctgtcatggatcgaaacaaagatgataaccggtcgatgatgtaacactgcttggtcattctgcaagctgagaagctgagtgaacttggggatcccagaagctactgcttctagcttcttgacagtagcagaaactttcatggtggattccttggatggaatcagctgcgatgctgcgatcttgatgcgtttgaaggagttactagaatcgatgatggagctcaccttgctggacatatctctccagttgcgcagtgtctgatcgcctcgacatgcggcgtcctcaagctcgcgtagccagcgtagtagccatgaattggtgatggcacaccccttggctgcctccagagcggtgtgaatttcgacgagaagctgccgcagacgatgagtctcctccttgacatgcttctgctcctgtgattctgaataaaagatactatttgttggatagtctctcctatgaccactgaacataatacctctagtggatccaccatgtttcttccttgcaattatagaggaaactacacaaaaaaaaatgagtttagtacataaccaaagtctgctagatgctgataactacaaagtgatggaagggatgagccccaatctttgatattagggaagcaaggaaatattgaataccaacagtataatagaaagggagatgtttcagttagtccaagaatgcttcatttttttcttttcttagcgaagatccctaaccgatttcgtgtattgatgacaagctgtctacttcagtatctcctctttaattaccaggaagtttccttggtgcctcttttgtcttgaggtctgaaaaacaaagacacaaattatttactattgccactgtctcgcctaattatcattgaccggttccacttcattcagaacatggccgaattgtttacacgatagatattcaattattcaggtccattctgtcattttctagtttgactccattgctagtgtgagcaaccgtcaaactatgaccattttactgttatatatattgcctcatggcctctctgtaaactgttcttcttcatgcaggttctgcgaaatgcttgactatgaagatgggaatgtgctcattgactatttacattggtgtctgactcactatttgatcttatcaatcatttcattaatatgtttgtgcgctttagagacattagtttagttgactgatttagaatggaactgttaactagtatgttaattgaagcattattaggataatccaagtgagtaaagagttactgctgtggcttgtgaaccgggtacatttttcatgacgtatttactgcgtccataacaagcattctaaatgcctaagggtctaaactatcagttggtaagtcctgaatccaagtgaactgcttagcaggatgcctgggacctactatgcaatagctttccttggctgttcacaagttaggcaattgacctgacagtttataccctgagcttgtttgaacctgtgtttgagtggaagtctccgactgtttatgctgaagcctcccatcgtttgctgttgtcaaattttgaatttaaaagttgattttggagttgattttggggtttttttcatcgtagtttcttactttcttttcctgaattagcttttaaatcaccaagaacatatatatataaaagttttatctaggaattattttttggttgctgataagttgttctacagattaacataacagaatgacagatctgtccgtccatgtttcaataatttaatgaaacctatccaggaatatatggagcatgtctctttctaaatgatttgttgtgtaccacaaattttagcgatgatgaattccacagtgggacattttcagcatgaaaaatccaatactcttagtggagggaaaaatgactttacggaacatttgactcaagtgtctgtcttccaagtactacagcaattgcagactataactgtgagtgaacaccatctaatagtctaaaacggttaactagattcagctgagcagaacaaataaataaggattcctaactagtgggatctacacgcttttagcaatatttgtttggcaaaattatcatattcagattgcagaacaaccagccaatcaaacattctaatggatttttccttactaacatatcgcctgagaattataacggaattttaattaaagaaaattatcattaacatgttattaccatctattaattggtgtatatatatttgttactcacatgtggacttttttagcttcacactggtttttcttttccataaaatatagagagttggtggaaatagctgatatctgggccctttaaccccgcgcgtatttcttttttttttAaaaaaaaaaagttgggagttggtaggcagtgggggaggtggctgaagtaccagtccaccactactactcctttttataagaagtatagattatcacaagttactcccttagtcccaaaatatctatttctagctacgaattggggtgcggagtatacaacaatgacaacagtaggaaacataataaagttttgtggattcttaatttctgccgtgctcatcctgcaacagttagccatttccagtcacacagtcattgcctacttttcttttttaattaaggatcaataactgtacaaagctggatatcagggactaaaactttacaggagtgttttggaatacttagctataagaaaaacatattacttatttgatattaccatagagtttaatatgattatttgatatgactactataccagtaaacttgatatatttcctatgaactacatactctgtccacaataagcatcctaaagccccaatggtctaaaagatcaattggtaagtcctgaatcaaataattcagaggtaaacagttaactgcttggtgcttgcctggacctacagatcagacaaatggtggtcagaattctgatatggcactgcattgttcatgaatctttacttgggtgtttacactaaattaggtaattgaccagacagactatgccctgactgtgagcttgtttgaacctgtgtttgaggcctagtttagttcccaactttttcttcaaactttcaacttttccatcacatcaaaactttcctacacacacaaactttcaacttttccgtcacatcgttccaatttcaatcaaacttccaattttagcgtgaactaaacacaccctgagtagtctactgttaccatgaacattgaacttgacgaaaaaaaaaagtctacgaatgtttcgataattcaatgaaacctatccttaaatctagcaaacatgtctctttctggatgatttgttggggaacacaattttggggatgattaaattccacagtggggtcttttcaatgagaacattcattaagttaaatatgacttaattgaaacttctttttttgttttggtctcaagtgtctttcaagtactacagcagatgaagactgcaactgctagtgaacaccatcaatttggttaataagattcagttgagcagaacagacaaacaagctaggatcctgaattagttgggcagttgggcctacatgcttttacgaatatttgtttgacgaaaattatcagattcagattgctgaataacagtcaatccctagtggattctccataaaacccaaagttattatacatcaatggcaataaaaggaaacgtagtaaggttaattgcatacgttatttgtagattctgaatttctgcaatgttatggaaacttagctataagaaaaacgatgtgtctcgtaagatttcaagtgtatccatatattgtctaatggggaacctgaaattcatctgatggagtctgaaatttccttagatatgggtgcacttaagaaacttccttagatatttcgttatggggattctgaaactctgaatgtgatgaaaacaatttcctaggtcaggttctgcagttctgaatatactgcagtttacttgcagttatgcagtttaggaggcaatgcataactatctctctgttttttttttctgaaagtaggaatgcgtaactgtcaaactattttgcttaccggcattggtaatgttaacaggttcttctcccagtctaatatatttttttactgaaatctctttctctgcagtcttgcacaaacagtatcactaactgaatatcattgcacccgctaactgttgtcctccagcat
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| CDS seq | atgctggaggacaacaacctcaagacaaaagaggcaccaaggaaacttcctgtttcctctataattgcaaggaagaaacatggtggatccactagaggtattatgttcagtggtcataggagagactatccaacaaatagtatcttttattcagaatcacaggagcagaagcatgtcaaggaggagactcatcgtctgcggcagcttctcgtcgaaattcacaccgctctggaggcagccaaggggtgtgccatcaccaattcatggctactacgctggctacgcgagcttgaggacgccgcatgtcgaggcgatcagacactgcgcaactggagagatatgtccagcaaggtgagctccatcatcgattctagtaactccttcaaacgcatcaagatcgcagcatcgcagctgattccatccaaggaatccaccatgaaagtttctgctactgtcaagaagctagaagcagtagcttctgggatccccaagttcactcagcttctcagcttgcagaatgaccaagcagtgttacatcatcgaccggttatcatctttgtttcgatccatgacagggtagttggcagagtcgatgagaggaaacaggccatcgaattcttgcttcacatagacaagaatggatcatcctctccagatggctgtgtgcttcccatttggggtgtcaaaggagtaggtaaaaccacgattgcgcggctcgtatgcgacgatcgcaaggtgaggagccatttctcaatgataatatgggtgaattgcagagaatatactagtccagccatggccttggtaaagtcattgtgcaagaagcttggtttgagttctaacgtaaccattaatctttcaagtgtgatccatgggatatcagaaaggctaagaatggagagatttctacttgttcttgatggtgcttctagctaccccaggggaatgaatggcatactcgatacactgttcatgaaaagtagagcaggaagcaaggccatcattaccactatgtaccaacatctggcaactaagatcaataagcatgaaaacttacctgtagggttcctggcaatggaagatctcggctgcatgttcatggaaaatgccctgggtggtgcacaccctgaagaataccagaaattacttgttattggaaagaagatcgctgtgacattgagggtgtgcagccctttagctgcaaaagttgtgagtggactgcttcgagaaaacctcaatgagaagtactggtacattgttctgaatcgctgtcaacagttcgtcgcatccagttccaggtttgttactccatttattctgggttcttcttcccaaacacctgcaacgctgctttggggtgttgggtacataccctcgctggaccttcacaagggaggaatgataagctattggatgaacaactgtgtcgtcgtcagtgaaaattgtatgaaaaatagcatagagaatgttgcgactgattactttgatgatttggtgaggaaggcattcatacaaccatcccacatcccagggctgtacaaagtggatgacatgctaagagacatagctctgtacataggtccaatgcctgttccaaaaacaagaatacatttagcgaatttgattggggaaggattttccatccacgaaagggtaacactcaatcctagccatccatttttctcacctcattttaccctaaccatccattcatttccatgtcccaatcccacctctcataacccatttgcgaaacagggctaa
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| Protein seq | MLEDNNLKTKEAPRKLPVSSIIARKKHGGSTRGIMFSGHRRDYPTNSIFYSESQEQKHVKEETHRLRQLLVEIHTALEAAKGCAITNSWLLRWLRELEDAACRGDQTLRNWRDMSSKVSSIIDSSNSFKRIKIAASQLIPSKESTMKVSATVKKLEAVASGIPKFTQLLSLQNDQAVLHHRPVIIFVSIHDRVVGRVDERKQAIEFLLHIDKNGSSSPDGCVLPIWGVKGVGKTTIARLVCDDRKVRSHFSMIIWVNCREYTSPAMALVKSLCKKLGLSSNVTINLSSVIHGISERLRMERFLLVLDGASSYPRGMNGILDTLFMKSRAGSKAIITTMYQHLATKINKHENLPVGFLAMEDLGCMFMENALGGAHPEEYQKLLVIGKKIAVTLRVCSPLAAKVVSGLLRENLNEKYWYIVLNRCQQFVASSSRFVTPFILGSSSQTPATLLWGVGYIPSLDLHKGGMISYWMNNCVVVSENCMKNSIENVATDYFDDLVRKAFIQPSHIPGLYKVDDMLRDIALYIGPMPVPKTRIHLANLIGEGFSIHERVTLNPSHPFFSPHFTLTIHSFPCPNPTSHNPFAKQG |
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| Function | Disease resistance protein RGA2 [UniProtKB/Swiss-Prot:Q7XBQ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_11g0006670 | OsGoSa_11g0006670.01 | Chr11 | 5483097 | 5488519 | - | NAM | ||
| CDS seq | atgctggaggacaacaacctcaagacaaaagaggcaccaaggaaacttcctgtttcctctataattgcaaggaagaaacatggtggatccactagaggtattatgttcagtggtcataggagagactatccaacaaatagtatcttttattcagaatcacaggagcagaagcatgtcaaggaggagactcatcgtctgcggcagcttctcgtcgaaattcacaccgctctggaggcagccaaggggtgtgccatcaccaattcatggctactacgctggctacgcgagcttgaggacgccgcatgtcgaggcgatcagacactgcgcaactggagagatatgtccagcaaggtgagctccatcatcgattctagtaactccttcaaacgcatcaagatcgcagcatcgcagctgattccatccaaggaatccaccatgaaagtttctgctactgtcaagaagctagaagcagtagcttctgggatccccaagttcactcagcttctcagcttgcagaatgaccaagcagtgttacatcatcgaccggttatcatctttgtttcgatccatgacagggtagttggcagagtcgatgagaggaaacaggccatcgaattcttgcttcacatagacaagaatggatcatcctctccagatggctgtgtgcttcccatttggggtgtcaaaggagtaggtaaaaccacgattgcgcggctcgtatgcgacgatcgcaaggtgaggagccatttctcaatgataatatgggtgaattgcagagaatatactagtccagccatggccttggtaaagtcattgtgcaagaagcttggtttgagttctaacgtaaccattaatctttcaagtgtgatccatgggatatcagaaaggctaagaatggagagatttctacttgttcttgatggtgcttctagctaccccaggggaatgaatggcatactcgatacactgttcatgaaaagtagagcaggaagcaaggccatcattaccactatgtaccaacatctggcaactaagatcaataagcatgaaaacttacctgtagggttcctggcaatggaagatctcggctgcatgttcatggaaaatgccctgggtggtgcacaccctgaagaataccagaaattacttgttattggaaagaagatcgctgtgacattgagggtgtgcagccctttagctgcaaaagttgtgagtggactgcttcgagaaaacctcaatgagaagtactggtacattgttctgaatcgctgtcaacagttcgtcgcatccagttccaggtttgttactccatttattctgggttcttcttcccaaacacctgcaacgctgctttggggtgttgggtacataccctcgctggaccttcacaagggaggaatgataagctattggatgaacaactgtgtcgtcgtcagtgaaaattgtatgaaaaatagcatagagaatgttgcgactgattactttgatgatttggtgaggaaggcattcatacaaccatcccacatcccagggctgtacaaagtggatgacatgctaagagacatagctctgtacataggtccaatgcctgttccaaaaacaagaatacatttagcgaatttgattggggaaggattttccatccacgaaagggtaacactcaatcctagccatccatttttctcacctcattttaccctaaccatccattcatttccatgtcccaatcccacctctcataacccatttgcgaaacagggctaa
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| Protein seq | MLEDNNLKTKEAPRKLPVSSIIARKKHGGSTRGIMFSGHRRDYPTNSIFYSESQEQKHVKEETHRLRQLLVEIHTALEAAKGCAITNSWLLRWLRELEDAACRGDQTLRNWRDMSSKVSSIIDSSNSFKRIKIAASQLIPSKESTMKVSATVKKLEAVASGIPKFTQLLSLQNDQAVLHHRPVIIFVSIHDRVVGRVDERKQAIEFLLHIDKNGSSSPDGCVLPIWGVKGVGKTTIARLVCDDRKVRSHFSMIIWVNCREYTSPAMALVKSLCKKLGLSSNVTINLSSVIHGISERLRMERFLLVLDGASSYPRGMNGILDTLFMKSRAGSKAIITTMYQHLATKINKHENLPVGFLAMEDLGCMFMENALGGAHPEEYQKLLVIGKKIAVTLRVCSPLAAKVVSGLLRENLNEKYWYIVLNRCQQFVASSSRFVTPFILGSSSQTPATLLWGVGYIPSLDLHKGGMISYWMNNCVVVSENCMKNSIENVATDYFDDLVRKAFIQPSHIPGLYKVDDMLRDIALYIGPMPVPKTRIHLANLIGEGFSIHERVTLNPSHPFFSPHFTLTIHSFPCPNPTSHNPFAKQG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0207400 | RBH | 0.137779 | 0.847772 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g10120 | RBH | 0.093173 | 0.570198 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0207400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0006790 | RBH | 0.136183 | 3.375531 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0006720 | RBH | 0.0 | 0.791542 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006710 | RBH | 0.000000 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0006650 | RBH | 0.000000 | 0.084428 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0006610 | RBH | 1.180200 | 0.000000 | 0.536185 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0088400 | RBH | 0.537478 | 9.3008665 | 0.0084055 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006630 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0089700 | RBH | 0.5807505 | 9.8670055 | 0.0605245 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0006580 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0006690 | RBH | 0.082732 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0007150 | SBH | 1.603995 | 13.509791 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0006720 | RBH | 0.066507 | 0.0 | 0.134057 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0006740 | RBH | 0.081425 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G006700 | RBH | 0.0 | 0.0 | 0.469191 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006530 | RBH | 0.0 | 8.767081 | 0.0 |
