Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_10g0014930 | OGI:10057110 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr10:20303904-20308774 | ||||||||
| Gene Symbol | RLCK302, OsRLCK302 | ||||||||||
| DNA seq | atgcactcctggaaattttctgactacaatcaacttccaaacagtacaaagtataaagtttttggtaaagcaaattgtttgcagcgctggagtcgacggctcgacgcggtctggtcaaagacttcaggagaccgacgggaggcgggggagccgaccggcgcaggcgatcttcgcagcgagggcgtcgctcGgggcggggcgcggtggcgcgacctgaggcaggggacggtgctgccggcgatgcgcggacagagcagcgaggtgcgggggcggggcgcatactgggcggcggggggctgagcagcgagcggcgtcgcctctccgtctctcggtcagccgggaggatgaaggggatcgatctgctttcctgggaggaggaggctatctctttactctcctgataggtgggcccatgggtaaatccgtccgatcaggtgagaaagatgaaggaaaatattagaaatctgagaaatttaggaaaatagagaaaaatggcatggaatgaaggaattcgtgcttccaatggcatattctgaaagtcacgcgaattgagtggtatatcctgaaaacggtgtgaattggatggcatatactgAaaaatctcgttccggtcgccgccgctgacccgcaggccacgctgctcaacctggggtgcagccagtacaacgcgaccccgactgccgccttcctcgccgctctcaactccaccttcggcgaactccgcgccaacctctcatctggtggtggtggtgaggggggtgggttcgccacggccgcggagccgcgcgtcgccgcgccggcgttcgcgatggcgcagtgccgcccctacgtcacgcgcggggactgcgtcgcgtgcttcgacgccgcggccacgcgcctccgcgccgcctgcggcgccgccaacggcgggcgcgccattctcgacggctgcgtcgtgaggtacgagagcgcggccttcttcgaccaggccacgctccccgggaacacgcaggtgtgcaacggctccgctgtcgccggcggcgggttcgcggacgcggcgcgggggatggtcggtgacctcgtggctgccgtgcctcgcgccccggggctcgccgcggcggccgcgggcgccggcgtgtacgccgcggcgcagtgtgtggtgacggtcggggagggtggctgcgcgcagtgcctggaggtggccgcgaggaacatcgacgggtgcccgcccaattccgacggccgcgccgtcgacgccggctgcttcatgaggtactccgataagccgttcttccccgcgaatgcgaccgtagacctggcgccatacttgcgatctggtgagttcacttaagttacgtatcatttcttcatggtttgcacgaattgtttaacctaaaggcttcatgaagtgcgtggagaagttttttctaatgtgctttatactaggcgcctaggcccatgcgtttgcaatcgcgtacatatttgttattcagtttgaacatacaagctgtataatttattgacacgttacaaaataattctctgctcattcttaaaatccggtattctgcttcaacgttcattagcctgatattagcaatttagcaaagatgttctggtagtctattttttaatgtttagcagacaacttctcaacaacaatgagattttcatttttgcaaggatatttcaatcaagtgaagacaacttctcaacaacaatgagattttcttttttgcaaggatgtttcaatcaagtgaaagcttatgtctaagaaccatgtgtcatattgatggatggattagacaaggagattttggttgtgggtctgtaaaataagtcctactacatggtaaaatagttctgcaatgctgtagaaaatagatgtgtgctgttttttattttttgtgccgtggtccatttttatacatttcaggaaaatcttctgctgtcaggaatttaaattttaaaagcagtttattttcagggagtggtcttggttgaggtcagtttaatgtagaatttcacctggggagcaatgtattacacaaagtttaccaaagcatagtcaataaaatattatgcctcatgttcaaagctcttcagttcagagctcttcctgaatgatctttgcagggaaatcagatcggaaaggagccatcataggaggaattttaggaggtgtggccttcctgttccttcttgatctattagctttcttgtggacctggcggtctaggaagctgttgaagcctcgtagaggtaaacaactatatttgtgaagtataccaccttcttggacttaaactttatgttcatgtctaattcttcaacatgttcttagcagcatggtcaaagatcaggtaggcgtgtcatctaaactaatttgatgcatttcatgaacttgtgaaattaatctactttaggaagttgaggtcatagtcatacacgaaggatattggccatgtttttccccctctcaacacatgctttcaggatctcaatgttgaaggcctttaattcttgatatgtttttgtggcacgtgaagtcaacttctatatttaccaataccaatatcgttaggtgcatttagatcggacacacacaaaatggtatgtttaattttgtcttgaaaaagtacttgcataatattaattatcatggtttctgaatatgttgatgtcctgaaaaatcagaagttatttgctgttttggagaatttgtcaatgtccaaaaaatcacttgtttgttacccgaaggagcaatcatttcaaaataagggcaaaaattgatcaactggtgtagggagaagttgtgtttgtgtacatcatgttccccaatgtattggaatcaagcaaagatccatctacatttgttttgcatttgcaaatttaatcaattccacatgttaaataactaacaaaaaaagttaccatgaccaagttttgcaaactacatttttccatagagggttaattggaaagaaaaggaaccacgatcttgtttctgtctctgactgtttttctttaggagatatacttggagcaacagaactgcagggtccaacaagtttttactatcaagatctgaaggttgcaaccaataatttctgtgaggaaagcaaacttggagaagggggttttggagatgtatttaaggcattgcaatcttcaactgttgaatcatctgtacagattttcatacaagatgcaactataaatagaacaagaacatctgatcatcagtattgatttgtttgactgtactaaatgccaaaataaatccatttgtgacagggtttgctgaaaaatggaaaaactgtagctgtaaaacggttgacagtgatggaaactagcagggccaaagcagattttgaaagtgaagtgaagttgattagcaatgttcatcatcggaatcttgtcaggcttcttggttgctctagcaagggctcggaatgcctgcttgtttatgaatacatggcaaatggaagcctcgacaagttcctcttcggtatgcttctcagttctttcttctttatgttgtttaaattttctgtgcatttgttggatatatggatgatatttttggtgcacttgatatttccatttgacttcacacttctattactagacactcctattgttatatgtagtttaagaggggaattgctttgctaaagatcaagttcagactgcagttaattagcttaagatgatagtgctgacctacgttctcttttgacaatggccttgttttatcttaacaggtgataaacgtggtacgcttaattggaagcaacgatttaacatcatcgttggcatggctcgtggccttggatatcttcatcaagaatttcatgtctgcatcatacaccgtgacattaaatctagcaatgttcttcttgatgatgagtttcagccaaagattgctgatttcggtttagcaaggctcctacctgatgatcatagtcatctcagcactaaatttgcaggaacattgtaagttcgaagatgaaaatattgctttagggacatatatcgtgtttctaattatattcacttaagcaggggttacacagctcctgaatatgccatccatgggcaactctctgagaaggttgacacatacagctttggtgttgtcgttttggaaataataagtggcaggaagctcaatgatgcaaggctggatcctgatagccagtacctacttgaatgggtatccgttgttctaaaaactttctttctcttgtatgcataccacagtttgcttgcatattttctcatacaaccttacatgtcttttacttgtgcttatggttatattcctacgcattgctaacttggtgacatgaatgcatttgctattcttttactataataagtatcaggtttgataaagttattcccaagcaaaattggtccatgttaagatcaggactaaacaatttgaattgttcattttcagtttgaagaaaatgcctcttgtggtgactgtattgagattttgttatgtgcctacccatactgcattttcctacatggcggcttgattttgatcatgcctgcttgttgtacaggcctggaagctttatgaaaacaacaacttgattgaattggtggataaatcattagacccaaaagaatataatcctgaagaggtgaaaaaaataatacagatagcccttctctgcactcaatcagctgttgcttcacgtccaacgatgtcagaggtagttgtgttgttgctgaccaaaaattcttcagagttccagcccactaggcctacttttattgatgcaataagtagagtacgaggtgaaacatcctcctccagttcatcttctgcatccaaggccactatttcgataacacagtattcagccaggtaa
More
|
||||||||||
| CDS seq | atgcactcctggaaattttctgactacaatcaacttccaaacagtacaaagtataaagtttttggtaaagcaaattgtttgcagcgctggagtcgacggctcgacgcggtctggtcaaagacttcaggagaccgacgggaggcgggggagccgaccggcgcaggcgatcttcgcagcgagggcgtcgctcGgggcggggcgcggtggcgcgacctgaggcaggggacggtgctgccggcgatgcgcggacagagcagcgagtacaacgcgaccccgactgccgccttcctcgccgctctcaactccaccttcggcgaactccgcgccaacctctcatctggtggtggtggtgaggggggtgggttcgccacggccgcggagccgcgcgtcgccgcgccggcgttcgcgatggcgcagtgccgcccctacgtcacgcgcggggactgcgtcgcgtgcttcgacgccgcggccacgcgcctccgcgccgcctgcggcgccgccaacggcgggcgcgccattctcgacggctgcgtcgtgaggtacgagagcgcggccttcttcgaccaggccacgctccccgggaacacgcaggtgtgcaacggctccgctgtcgccggcggcgggttcgcggacgcggcgcgggggatggtcggtgacctcgtggctgccgtgcctcgcgccccggggctcgccgcggcggccgcgggcgccggcgtgtacgccgcggcgcagtgtgtggtgacggtcggggagggtggctgcgcgcagtgcctggaggtggccgcgaggaacatcgacgggtgcccgcccaattccgacggccgcgccgtcgacgccggctgcttcatgaggtactccgataagccgttcttccccgcgaatgcgaccgtagacctggcgccatacttgcgatctgggaaatcagatcggaaaggagccatcataggaggaattttaggaggtgtggccttcctgttccttcttgatctattagctttcttgtggacctggcggtctaggaagctgttgaagcctcgtagagcagcatggtcaaagatcaggcttcttggttgctctagcaagggctcggaatgcctgcttgtttatgaatacatggcaaatggaagcctcgacaagttcctcttcggtgataaacgtggtacgcttaattggaagcaacgatttaacatcatcgttggcatggctcgtggccttggatatcttcatcaagaatttcatgtctgcatcatacaccgtgacattaaatctagcaatgttcttcttgatgatgagtttcagccaaagattgctgatttcggtttagcaaggctcctacctgatgatcatagtcatctcagcactaaatttgcaggaacattgggttacacagctcctgaatatgccatccatgggcaactctctgagaaggttgacacatacagctttggtgttgtcgttttggaaataataagtggcaggaagctcaatgatgcaaggctggatcctgatagccagtacctacttgaatgggcctggaagctttatgaaaacaacaacttgattgaattggtggataaatcattagacccaaaagaatataatcctgaagaggtgaaaaaaataatacagatagcccttctctgcactcaatcagctgttgcttcacgtccaacgatgtcagaggtagttgtgttgttgctgaccaaaaattcttcagagttccagcccactaggcctacttttattgatgcaataagtagagtacgaggtgaaacatcctcctccagttcatcttctgcatccaaggccactatttcgataacacagtattcagccaggtaa
More
|
||||||||||
| Protein seq | MHSWKFSDYNQLPNSTKYKVFGKANCLQRWSRRLDAVWSKTSGDRREAGEPTGAGDLRSEGVARGGARWRDLRQGTVLPAMRGQSSEYNATPTAAFLAALNSTFGELRANLSSGGGGEGGGFATAAEPRVAAPAFAMAQCRPYVTRGDCVACFDAAATRLRAACGAANGGRAILDGCVVRYESAAFFDQATLPGNTQVCNGSAVAGGGFADAARGMVGDLVAAVPRAPGLAAAAAGAGVYAAAQCVVTVGEGGCAQCLEVAARNIDGCPPNSDGRAVDAGCFMRYSDKPFFPANATVDLAPYLRSGKSDRKGAIIGGILGGVAFLFLLDLLAFLWTWRSRKLLKPRRAAWSKIRLLGCSSKGSECLLVYEYMANGSLDKFLFGDKRGTLNWKQRFNIIVGMARGLGYLHQEFHVCIIHRDIKSSNVLLDDEFQPKIADFGLARLLPDDHSHLSTKFAGTLGYTAPEYAIHGQLSEKVDTYSFGVVVLEIISGRKLNDARLDPDSQYLLEWAWKLYENNNLIELVDKSLDPKEYNPEEVKKIIQIALLCTQSAVASRPTMSEVVVLLLTKNSSEFQPTRPTFIDAISRVRGETSSSSSSSASKATISITQYSAR |
||||||||||
| Function | Cysteine-rich receptor-like protein kinase 3 [UniProtKB/Swiss-Prot:Q9CAL2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_10g0014930 | OsGoSa_10g0014930.01 | Chr10 | 20303904 | 20308774 | + | NAM | ||
| CDS seq | atgcactcctggaaattttctgactacaatcaacttccaaacagtacaaagtataaagtttttggtaaagcaaattgtttgcagcgctggagtcgacggctcgacgcggtctggtcaaagacttcaggagaccgacgggaggcgggggagccgaccggcgcaggcgatcttcgcagcgagggcgtcgctcGgggcggggcgcggtggcgcgacctgaggcaggggacggtgctgccggcgatgcgcggacagagcagcgagtacaacgcgaccccgactgccgccttcctcgccgctctcaactccaccttcggcgaactccgcgccaacctctcatctggtggtggtggtgaggggggtgggttcgccacggccgcggagccgcgcgtcgccgcgccggcgttcgcgatggcgcagtgccgcccctacgtcacgcgcggggactgcgtcgcgtgcttcgacgccgcggccacgcgcctccgcgccgcctgcggcgccgccaacggcgggcgcgccattctcgacggctgcgtcgtgaggtacgagagcgcggccttcttcgaccaggccacgctccccgggaacacgcaggtgtgcaacggctccgctgtcgccggcggcgggttcgcggacgcggcgcgggggatggtcggtgacctcgtggctgccgtgcctcgcgccccggggctcgccgcggcggccgcgggcgccggcgtgtacgccgcggcgcagtgtgtggtgacggtcggggagggtggctgcgcgcagtgcctggaggtggccgcgaggaacatcgacgggtgcccgcccaattccgacggccgcgccgtcgacgccggctgcttcatgaggtactccgataagccgttcttccccgcgaatgcgaccgtagacctggcgccatacttgcgatctgggaaatcagatcggaaaggagccatcataggaggaattttaggaggtgtggccttcctgttccttcttgatctattagctttcttgtggacctggcggtctaggaagctgttgaagcctcgtagagcagcatggtcaaagatcaggcttcttggttgctctagcaagggctcggaatgcctgcttgtttatgaatacatggcaaatggaagcctcgacaagttcctcttcggtgataaacgtggtacgcttaattggaagcaacgatttaacatcatcgttggcatggctcgtggccttggatatcttcatcaagaatttcatgtctgcatcatacaccgtgacattaaatctagcaatgttcttcttgatgatgagtttcagccaaagattgctgatttcggtttagcaaggctcctacctgatgatcatagtcatctcagcactaaatttgcaggaacattgggttacacagctcctgaatatgccatccatgggcaactctctgagaaggttgacacatacagctttggtgttgtcgttttggaaataataagtggcaggaagctcaatgatgcaaggctggatcctgatagccagtacctacttgaatgggcctggaagctttatgaaaacaacaacttgattgaattggtggataaatcattagacccaaaagaatataatcctgaagaggtgaaaaaaataatacagatagcccttctctgcactcaatcagctgttgcttcacgtccaacgatgtcagaggtagttgtgttgttgctgaccaaaaattcttcagagttccagcccactaggcctacttttattgatgcaataagtagagtacgaggtgaaacatcctcctccagttcatcttctgcatccaaggccactatttcgataacacagtattcagccaggtaa
More
|
|||||||
| Protein seq | MHSWKFSDYNQLPNSTKYKVFGKANCLQRWSRRLDAVWSKTSGDRREAGEPTGAGDLRSEGVARGGARWRDLRQGTVLPAMRGQSSEYNATPTAAFLAALNSTFGELRANLSSGGGGEGGGFATAAEPRVAAPAFAMAQCRPYVTRGDCVACFDAAATRLRAACGAANGGRAILDGCVVRYESAAFFDQATLPGNTQVCNGSAVAGGGFADAARGMVGDLVAAVPRAPGLAAAAAGAGVYAAAQCVVTVGEGGCAQCLEVAARNIDGCPPNSDGRAVDAGCFMRYSDKPFFPANATVDLAPYLRSGKSDRKGAIIGGILGGVAFLFLLDLLAFLWTWRSRKLLKPRRAAWSKIRLLGCSSKGSECLLVYEYMANGSLDKFLFGDKRGTLNWKQRFNIIVGMARGLGYLHQEFHVCIIHRDIKSSNVLLDDEFQPKIADFGLARLLPDDHSHLSTKFAGTLGYTAPEYAIHGQLSEKVDTYSFGVVVLEIISGRKLNDARLDPDSQYLLEWAWKLYENNNLIELVDKSLDPKEYNPEEVKKIIQIALLCTQSAVASRPTMSEVVVLLLTKNSSEFQPTRPTFIDAISRVRGETSSSSSSSASKATISITQYSAR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0483400 | RBH | 0.0 | 0.0 | 0.303209 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g34220 | RBH | 0.0 | 0.0 | 0.077973 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0483400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0014980 | RBH | 0.0 | 0.0 | 0.280313 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0015230 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0014670 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0015010 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0014940 | RBH | 0.0 | 0.0 | 0.478123 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0300700 | RBH | 0.019376 | 0.058264 | 0.0079025 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0014880 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0323600 | RBH | 0.155956 | 0.286848 | 0.981589 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0014590 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0014510 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0013350 | RBH | 10.748864 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0014620 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0015190 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G014820 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0014860 | RBH | 0.0 | 0.0 | 0.526522 |
