Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_09g0013760 | OGI:09053020 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr09:19135644-19136165 | ||||||||
| Gene Symbol | TFX1, OsbZIP73, bZIP73, OsTFX1 | ||||||||||
| DNA seq | tcaaatattcttgcatggctgtgaggagctcggcgaggtgttattcttctgtgcttgcatgaggtgctcgagcttggtctggagctcggccctctccttcctgagccgggcgttctcgcagtggacatcactgcagcccctcattgcttggttgagctcatcaaggaggcggcggttggcgtcacggaggtggacaacctgccccctcagctcgctgagctgccgctgcttgcgcatgcgcgaccgccgtgccgactcccggttggagatcatcctccgccgcctccgctcctcctccgctgccatctggtaggcgtcatctgtgctgccagagccggctgggcgattgcccgctaccacagggagcaattcctggataggttcacaggtagctgctgggaagtggaagggcgagggtgccatggtgatcatgttgctgtggtagtgggaactgaatggtaggcttggaggtgagaggcagtgcaggctggccacctcgccatggtaatggtggtgcagcat
More
|
||||||||||
| CDS seq | atgctgcaccaccattaccatggcgaggtggccagcctgcactgcctctcacctccaagcctaccattcagttcccactaccacagcaacatgatcaccatggcaccctcgcccttccacttcccagcagctacctgtgaacctatccaggaattgctccctgtggtagcgggcaatcgcccagccggctctggcagcacagatgacgcctaccagatggcagcggaggaggagcggaggcggcggaggatgatctccaaccgggagtcggcacggcggtcgcgcatgcgcaagcagcggcagctcagcgagctgagggggcaggttgtccacctccgtgacgccaaccgccgcctccttgatgagctcaaccaagcaatgaggggctgcagtgatgtccactgcgagaacgcccggctcaggaaggagagggccgagctccagaccaagctcgagcacctcatgcaagcacagaagaataacacctcgccgagctcctcacagccatgcaagaatatttga
More
|
||||||||||
| Protein seq | MLHHHYHGEVASLHCLSPPSLPFSSHYHSNMITMAPSPFHFPAATCEPIQELLPVVAGNRPAGSGSTDDAYQMAAEEERRRRRMISNRESARRSRMRKQRQLSELRGQVVHLRDANRRLLDELNQAMRGCSDVHCENARLRKERAELQTKLEHLMQAQKNNTSPSSSQPCKNI |
||||||||||
| Function | Basic leucine zipper 8 [UniProtKB/Swiss-Prot:Q9CA46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_09g0013760 | OsGoSa_09g0013760.01 | Chr09 | 19135644 | 19136165 | - | NAM | ||
| CDS seq | atgctgcaccaccattaccatggcgaggtggccagcctgcactgcctctcacctccaagcctaccattcagttcccactaccacagcaacatgatcaccatggcaccctcgcccttccacttcccagcagctacctgtgaacctatccaggaattgctccctgtggtagcgggcaatcgcccagccggctctggcagcacagatgacgcctaccagatggcagcggaggaggagcggaggcggcggaggatgatctccaaccgggagtcggcacggcggtcgcgcatgcgcaagcagcggcagctcagcgagctgagggggcaggttgtccacctccgtgacgccaaccgccgcctccttgatgagctcaaccaagcaatgaggggctgcagtgatgtccactgcgagaacgcccggctcaggaaggagagggccgagctccagaccaagctcgagcacctcatgcaagcacagaagaataacacctcgccgagctcctcacagccatgcaagaatatttga
More
|
|||||||
| Protein seq | MLHHHYHGEVASLHCLSPPSLPFSSHYHSNMITMAPSPFHFPAATCEPIQELLPVVAGNRPAGSGSTDDAYQMAAEEERRRRRMISNRESARRSRMRKQRQLSELRGQVVHLRDANRRLLDELNQAMRGCSDVHCENARLRKERAELQTKLEHLMQAQKNNTSPSSSQPCKNI |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 24.192514 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0474000 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g29820 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0474000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0013830 | RBH | 0.0 | 2.839973 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0013780 | RBH | 0.0 | 6.492686 | 0.320580 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0014040 | RBH | 0.0 | 9.871386 | 3.301164 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0013870 | RBH | 0.0 | 0.062861 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0013980 | RBH | 0.0 | 7.495848 | 1.371125 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0303000 | RBH | 0.7547925 | 7.1882025 | 0.1412665 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0013880 | RBH | 0.0 | 0.215703 | 0.236101 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0293200 | RBH | 1.122605 | 3.8923095 | 0.9004965 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0013870 | RBH | 0.0 | 0.275940 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0013670 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0019390 | RBH | 2.831409 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0013640 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0013700 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G014170 | RBH | 0.0 | 0.697629 | 0.442308 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0013950 | RBH | 0.0 | 9.067173 | 0.758750 |
