Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_08g0000870 | OGI:08001580 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr08:688071-696974 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | aaaaccggagctaagctgtatggcatctctggtaatcggcgcagcatatatgccatctttggatgccaccctgcttccacagctctcgacagtccgtctctcgggaaattaaggccggcaagttgtacatcccatcccggcaagcaagggcctccatcatgtcatcgatgagagcatccaggccatgggaatgccatctagctacgccggccgccctagctttgaaccacttgatccaccctgcgggcggtggcctccacgtttgccgctcagcagtccgctttacgtacggggtctttgaaaaacaaacgagtaacgtacaatcgtgaatgaatgatttgatatgataaagggcatccgaggaggcttacccgactttacacagggagatccacaattaaaagagctaaaagatgaaatataagagaacaatgatggggttaaatagtagtggtgtcaatattcctgtatccaaaactatagatggtcaaacgggcggcacggcccaggcccaggcatcagggccttgccgtgccagcccaaaggcacgacggtccatcatggttttccacagaataagtctatttttcttccctcgactctgtgggttgggtccatatggctagaaataagtctattttgtattcctcttctctttgggcctatctgatatggttcattaagtctattttgcgtccctctactttttttattcggtcatgccgtgccgggccagcccaccgtgccgagggtgcggcacgggcacgaccccgagttgggccgtgccgtgcttgggacaggccaaaatggcgtgccttggaccgagccacgggcctcgggccatatggctatctatatccaaaacacatacaattataaatttaccactgatttaaattgcacgttattaaatccGctgcctactTATAAacccaggtttccttattaaatccgctgcctacttataatcccaggtttctttgaaacgaagaaaaagggaagaatatttggtgggatttgttaagtaagaaaaaaaatccaatgaaatcctttggcacaaaggataccaaaggattgatccctatatattattttgcaatttctctactgccttccgtttcccctcctgtatatatatagggataaattcctatgaaatccttcaatgtccactatagggataaattaaggccctgtttgatttagcttaaaattattataatctagcttattaggagtaagctgaaataaataAGTagattattataacagattattataatctataagtcagattattataatctaataagctgctctaaaagagcTtttttcagattattgagtggctaaaaacccactgcctctatatacttgagaaaaattatccacctatgccatcaaccgaacagatagctgagggcattatagactttagactttcaaacccaataatccatgcctccaataatccagacaaacaaacaactcacagcttattttatatcagcttattataatccagcttatagcaatctggtttaataatctagattataataattataagctgaaaaaagagggcctagttctgatggaatccttccgtgtctcttcctcccaccacgtgcaacacgctctcaagcgttaagtatacataagcagatccaatgttttgtccatatttatatgggcctaatccgttaaaacgtaagagcatggcatgttacacccatttataatgagccaatccataaaaaagttttgattaaaaagagcacgaggttatgccttagttcctgcttgtttttctaatgtatcatccaaacattagtttggaaacttttctatggtttggtttctgtaatactccgaattcaacacgcatgacattttattggtacatttctattatgtttcagtgtttgaatcctgcattctaatggtgttttaagaatttgcggatgagaaaatgtgataaacctttaatctttgcttaataactaacgggaatgCccttgtgtgcgggggagaaaatgggagtctccggtgaaggaccacatgggcaccgccccctgtcatccgatggcctggtcgaggatgtcagacgatagacggtactggatatgatatatcctaatacttagaatctaaactttaataccagtctagattcgtcgtattaggatatgtcaaatccctccaaaatcctttatattttgggacagaaagagtaagacagaagccgcagtgtgcgggcaggAaaaaaagtgaaaatatatctctttttattggttttacataaatatacatgtttaaaagggattcatagaagtatgttgttgtcgtagaatggaagtgcgaaatcatgcattactgtacaacttcgcgtgatgaggacgcgataccgcttggggccacgcggcgagtgtgtgagaccgtacgatgctagactagtagaatatgtgcaatgtaggttatccatagcattgtgcagtgctacgtatttgttgcaagttatagaatttaaatttaaattggtatatttatgaagtgatatactccctccattatacaatataaggatctagcaatatatgagaaatactctagtactatacatgaatctagacaaacCTcttgtctagattcgtagtactaggggcctattcaaattcgtattattaggatgcgtcttatccaatactaaattattatattataggacgaagcgagtatcatatattcattatcctattatgtttctaaatatgttcataactattataatgacatgcaagcagtgatactaattggtgcaactgtgcaagcaacagcaacagtagcgtaatttaaatatgttcataactattataataatatgcaagcaggattactaattggtgcaactgtgcaagcaggaatagcctaagcatggtgatgaaatttgtcatagtttaagcaacaatagtttaagagatcattttccatgatctcctgatctcctccattgtcaaaggctggccacccaccacctcacatggtaggttataccattttctctgcatgccgcccatggtgatgaaatttctcaatttttctgctcagtctagttcacaccaaacttctctccaactcccaactttccatcacatcacatcacatccaaaactttcttacacacataaactcctaactttttttccaaactatcaactttctccaaacTtctccccaattttataaactaaacacaacctatgagataggagtacatgatattgacaacaatgggcagtaagtactcccttcgtcctaaaatataacaccttttaggtggatgagacatattttaatccctattttctataaagttaatgtcattctctcttctctcatgaagccacatcacctcaattgcatctcttcacatcacctcaattgtttttagcctttggatgattcatcaagggcaacatatcctatgcacacaggCcctcacgtgtacacacgtgcataccaactAaaatatatcaccaaaaaatctagaaaaaatcatacacatactttcaattgtattacacctagggttaaaatcttaacgtcaaattcattatattttagccataacaaaaaaaaaatcttacagttttaaggttgtaattttgtcagaattttatcttttttgttattatctatgtagaatgaatttgaagatgcgactttgcacgtagatgtaatactattgaaagtacatgtatgaattttcctagaattttttgtgatgatttttagttggtgtacacggtgtgtacacgcgagggcctgtgtgcataggatacgctcccttcattaagagtgtaaattacatctcttcccccaaaagacacaccatacaacacaaccatttataacctatggataactgataaagggacaaagatatataaacacatgaaaaaaatcatatagtaggtaagaaaTtttttttagaattcataTCtactatattattatacagttctcccgcatcaacacgcagggtatccataaatcaggactgccatgatacgacccgtccaggcgtcccccctaaaattgttatactccctccgttcattttttatcATTatattcggcttgtgcaacaataccaagataaacatcaattagcactatcaacctttcatgtccttgcatgcctcattgactgtccaattagttgtgattgcataaaatgcttgaccaaaatttctattaatagagctgcaaggcatacacgcaacgcagtatacgaagcatttttgtcacagtcccacctaatatgacgatcaaatatgaatttttatgttttgaaaatatgatgattaaaattgaacagagggagtattttgtacggagggagtagcttgtacatgcatggatgcaactcacggcgtggtcaccgcgcccatgaactcctcgtcggcgacgagcttccccagcgccgccggagccaggcaaacctccagcgacatgctcccggcaccgcccggcccctcgtacaccgtcaccttgccgtcgaacttgttcgcgccgccgctccgcacgctcaccggcctcccccacccgaagtcgttgccgaacacgtcgaaccgcggcgagctccccgtgtggacggcggtgcctcccgccgccttcgcgaagttggagaactccggcgcccgcggccacggcgcgatcgcgccccgcatggcggcctcgtcgagcgacgccacgaagcggttcagctgccacgccgtCcacccgagccctctctccatgacctcgccggccgtcagcctcaccgcgccgggcacgacggcgttccccacgtaccccggcgagatgccgctcacgcgcccccggcaaccgatgaccagtacgtacgccgtctcctggcgcggcgcgaggccatgagctcgcgacaccgagcgccaaacatgagcgagcagggcctggagggaggagatggtggcggcggcgccggcgatctcgccgttcgccttcgccttgagcttccttatgctctccgcggagaaagcgaagaagcactcttgcaatggaggtggtgggtggtcgcgtcgcgggatgatgtgctcgagcttggcgaacggcagagggatcggcaccgggcaggtgtccaggaaccacctcttcaccaccagaggtggcgacggcgagatgtccagtttgcttctgcttcgactgatctccgaccatgtgttcatgaactcccagaaattggtgccgtcgccgacgacatggttgagcgacatggcgatgaacacgccgtcggagagctcggtgacctgcgcggcaagaaccggcagggagtccgccgcagcgaccgcgggaagcagcccggtgagcgggaagaaggaccagaccacccgcggaatgtacagcgagccggcgatgtcggcgacggcgacgtcgggcgccgtggcgtggacgaactcagcgccttcgtcgttgcagcgcaagaacacggagatgctgctcggaggcgacgctccgtcctccacctcggccacggcgaggcggccggcgaaggggtagaagcggccgagtgcgcgagcgaacgacgacgccaggtgttcgacgaggtgctcgccgccggtgggcggcttgggcaggaggacgcccttctggatgtactccgcagtgagcagagggagatcccacggcgtcaggtgcaccgtcgtctcatgctccggcggcaactccggccggatcacgcgccgtgacacgacccgaacgccgccggtgttgccttccattttttggttgcaaccgtagtgatgagtgtagcttctagctaagcagatgatgatgatttagaacagcagcaaacttcttatctgattgatgagcttatggacatcaagtgagacaagtttattttttaacacttaatctgatagcgaatacatttgtagatcttgcatatttatgttatggcttatattatcataatctatctggatattttttttgcacaaccatttagttaagtcacatatatacacgatactttctgattctgggctgtgggggagaattgaagcaagtcgttttcatcccttgtgcgaatgttttctgttttttttacaaaaaatctttataatacgaacatatcttagtaggaatagcaggcatttttccacttttgtgtacaagtgtattgaaattcttgttgtgataatgaaagtgactcaaagcatagagatatcagatatacatgatatgatattatatcagcatatgcagcatgctgtgacagcaaccggagatgttttaattcgacagcatgttacgagtattaggctattagccaatgattagcaatccatttcaaagacttaatagtggatactggatagtatcatgtatataggttgcagaaagttcagtgccatgcatgcatcaatcaggtttggagttcagaacagcacacatcaaacaatataaactgcctaagaacaatccattttgtgtttcgttcacgttgagttgatgacattaatcacactgtctcatcatgtgatctaccgtacatcagattagcaaggtcaagttgggtcccatgaggcagtgacttacttttctgcatgtgggccaccaggaggctgttgactcgtcaactctagccatccgtcgttcccggcattcatgttctgaaactcatctcaaccatctaaatttgcagctgctgcaatatttgtacaagcatttgctaccagacgtgttatataccattggaaagttcgtagatcctaatttcgataaaagcaatttacaatcgattttgtgttctatgcaccaagataaggctgcttgaagatgggccgcggttcacggttcaggttcaggacacagcttgatgacaggaagacgattgttggtttattctcagcacaagctgcaagctcatttgaatccatctacagtactccctccgtttcagaatgtaagtcattttagtatttctcacattcatattgatactaatgaatctagacatatatatctatatagattcattagcatcaatatgaatgtgaaaaatgctagaatgacttacattgtgaaacggagaaagtaattactatctactagctgataatatgaaagtttaagatgattgatcatcagaaagtccctggcatttgaatcctctggttgaactctggcatttctgatcacgacctcggcctccgtgggcatccttcaattttccttcaaattcgtctaaaaaccattcgaaatttcacttcacaaacatattgatttatccttgtttgatacaaaaggtaatccagtgatatctctgatctatcagctatagctgttgatgaattcatcacctttctactgacaacttgacataaatggattacatgatgtcgatgtgaatgTTttttttttaaccaattgagcttgcaaatcgcaatgaatagaagcatgcatggatgcaactcacggcgtggtcaccgcgcccatgaactcctcgtcggcgacgagcttccccagcgccgccggagccaggcaaacctccagcgacatgctcccggcaccgcccggCccctcgtacaccgtcaccttgccgtcgaacttgttcgcgccgccgctccgcacggtcgccggcctcccccacccgaagtcgttgccgaacacgtcgaaccgcggcgagctccccgtgatgatggcggcgccgccgagcaggctcaggacggagaagaagtccggccgccgcggccacgacgccaGCgcgcccctcatggccgcctcgtcgaacgacgccacgtacttgttcagctgccacgccgtccacccgagccccctctccatgatctcgccggccgtcagcctcaccgcgccgggcaccacggcgttccccatgtaccccgacgagatgccgcccacgcgtccccggcacccgacgaccaccacgtacgccgtctcctggcgcggcgcgaggccgcgggctcgcgaaaccgcgcgccacacgagcgcgagcagcgcctggagggaggagatagcgacggcggcgccggcgatctcgtcgttcgccttcgccttcagcttccttatgctcgccgcggagaaagcgaagaagcattcctgcaccggcgcttggtgctcgcttcgcgggatgatctgctcgagcttggcgaacgacagagggatcggcaccgtgcagttgtccaagaaccacctcttgaccaccagaggcggcgaagtcgacgtcgacgccgatggcgagatgcccagttcgccgccgctacttcgactgatctccgaccatgtgttcatgaactcccagaaattggtgccgtcgccgacgacgtggttgacagacatggcgatgaacacgccgtcagagagctcggtgacctgcgtggacagaaccggcagggattccgtcgcggcgtgtgcagcaaccactccattgagcgggaagaaggaccagaccacgcgtggaatgtgcagcgaggcggcgatgtcggcgacggcgacgtcgggcgccgcggcgtggacgaactcagcgccttcgtcgttgcagcgcagcgagacggatacgctgctcgcaggcgacgctccgccatccacctcttccacgacgaggcggccggcgaaggggtagaagcggccgagtgcgcgagcgaacgacgacgccaggtgttcgacgagagtctcgccgccggtgggtggcttgggaaggaggatgcccttctggatgttctccacggtgagcagccggagatcccacggcgtcaggtgaaccgtcgtatcatgctccggcggcagctccttgaactccggccggatcatgcggcgtgacacgacgaggacgccgccgccgccggtgttggcttccat
More
|
||||||||||
| CDS seq | atggaagccaacaccggcggcggcggcgtcctcgtcgtgtcacgccgcatgatccggccggagttcaaggagctgccgccggagcatgatacgacggttcacctgacgccgtgggatctccggctgctcaccgtggagaacatccagaagggcatcctccttcccaagccacccaccggcggcgagactctcgtcgaacacctggcgtcgtcgttcgctcgcgcactcggccgcttctaccccttcgccggccgcctcgtcgtggaagaggtggatggcggagcgtcgcctgcgagcagcgtatccgtctcgctgcgctgcaacgacgaaggcgctgagttcgtccacgccgcggcgcccgacgtcgccgtcgccgacatcgccgcctcgctgcacattccacgcgtggtctggtccttcttcccgctcaatggagtggttgctgcacacgccgcgacggaatccctgccggttctgtccacgcaggtcaccgagctctctgacggcgtgttcatcgccatgtctgtcaaccacgtcgtcggcgacggcaccaatttctgggagttcatgaacacatggtcggagatcagtcgaagtagcggcggcgaactgggcatctcgccatcggcgtcgacgtcgacttcgccgcctctggtggtcaagaggtggttcttggacaactgcacggtgccgatccctctgtcgttcgccaagctcgagcagatcatcccgcgaagcgagcaccaagcgccggtgcaggaatgcttcttcgctttctccgcggcgagcataaggaagctgaaggcgaaggcgaacgacgagatcgccggcgccgccgtcgctatctcctccctccaggcgctgctcgcgctcgtgtggcgcgcggtttcgcgagcccgcggcctcgcgccgcgccaggagacggcgtacgtggtggtcgtcgggtgccggggacgcgtgggcggcatctcgtcggggtacatggggaacgccgtggtgcccggcgcggtgaggctgacggccggcgagatcatggagagggggctcgggtggacggcgtggcagctgaacaagtacgtggcgtcgttcgacgaggcggccatgaggggcgcGCtggcgtcgtggccgcggcggccggacttcttctccgtcctgagcctgctcggcggcgccgccatcatcacggggagctcgccgcggttcgacgtgttcggcaacgacttcgggtgggggaggccggcgaccgtgcggagcggcggcgcgaacaagttcgacggcaaggtgacggtgtacgagggGccgggcggtgccgggagcatgtcgctggaggtttgcctggctccggcggcgctggggaagctcgtcgccgacgaggagttcatgggcgcgttgccgccggagcatgagacgacggtgcacctgacgccgtgggatctccctctgctcactgcggagtacatccagaagggcgtcctcctgcccaagccgcccaccggcggcgagcacctcgtcgaacacctggcgtcgtcgttcgctcgcgcactcggccgcttctaccccttcgccggccgcctcgccgtggccgaggtggaggacggagcgtcgcctccgagcagcatctccgtgttcttgcgctgcaacgacgaaggcgctgagttcgtccacgccacggcgcccgacgtcgccgtcgccgacatcgccggctcgctgtacattccgcgggtggtctggtccttcttcccgctcaccgggctgcttcccgcggtcgctgcggcggactccctgccggttcttgccgcgcaggtcaccgagctctccgacggcgtgttcatcgccatgtcgctcaaccatgtcgtcggcgacggcaccaatttctgggagttcatgaacacatggtcggagatcagtcgaagcagaagcaaactggacatctcgccgtcgccacctctggtggtgaagaggtggttcctggacacctgcccggtgccgatccctctgccgttcgccaagctcgagcacatcatcccgcgacgcgaccacccaccacctccattgcaagagtgcttcttcgctttctccgcggagagcataaggaagctcaaggcgaaggcgaacggcgagatcgccggcgccgccgccaccatctcctccctccaggccctgctcgctcatgtttggcgctcggtgtcgcgagctcatggcctcgcgccgcgccaggagacggcgtacgtactggtcatcggttgccgggggcgcgtgagcggcatctcgccggggtacgtggggaacgccgtcgtgcccggcgcggtgaggctgacggccggcgaggtcatggagagagggctcgggtgGacggcgtggcagctgaaccgcttcgtggcgtcgctcgacgaggccgccatgcggggcgcgatcgcgccgtggccgcgggcgccggagttctccaacttcgcgaaggcggcgggaggcaccgccgtccacacggggagctcgccgcggttcgacgtgttcggcaacgacttcgggtgggggaggccggtgagcgtgcggagcggcggcgcgaacaagttcgacggcaaggtgacggtgtacgaggggccgggcggtgccgggagcatgtcgctggaggtttgcctggctccggcggcgctggggaagctcgtcgccgacgaggagttcatgggcgcgaccccgtacgtaaagcggactgctgagcggcaaacgtggaggccaccgcccgcagggtggatcaagtggttcaaagctagggcggccggcgtagctagatggcattcccatggcctggatgctctcatcgatgacatgatggaggcccttgcttgccgggatgggatgtacaacttgccggccttaatttcccgagagacggactgtcgagagctgtggaagcagggtggcatccaaagatggcatatatgctgcgccgattaccagagatgccatacagcttag
More
|
||||||||||
| Protein seq | MEANTGGGGVLVVSRRMIRPEFKELPPEHDTTVHLTPWDLRLLTVENIQKGILLPKPPTGGETLVEHLASSFARALGRFYPFAGRLVVEEVDGGASPASSVSVSLRCNDEGAEFVHAAAPDVAVADIAASLHIPRVVWSFFPLNGVVAAHAATESLPVLSTQVTELSDGVFIAMSVNHVVGDGTNFWEFMNTWSEISRSSGGELGISPSASTSTSPPLVVKRWFLDNCTVPIPLSFAKLEQIIPRSEHQAPVQECFFAFSAASIRKLKAKANDEIAGAAVAISSLQALLALVWRAVSRARGLAPRQETAYVVVVGCRGRVGGISSGYMGNAVVPGAVRLTAGEIMERGLGWTAWQLNKYVASFDEAAMRGALASWPRRPDFFSVLSLLGGAAIITGSSPRFDVFGNDFGWGRPATVRSGGANKFDGKVTVYEGPGGAGSMSLEVCLAPAALGKLVADEEFMGALPPEHETTVHLTPWDLPLLTAEYIQKGVLLPKPPTGGEHLVEHLASSFARALGRFYPFAGRLAVAEVEDGASPPSSISVFLRCNDEGAEFVHATAPDVAVADIAGSLYIPRVVWSFFPLTGLLPAVAAADSLPVLAAQVTELSDGVFIAMSLNHVVGDGTNFWEFMNTWSEISRSRSKLDISPSPPLVVKRWFLDTCPVPIPLPFAKLEHIIPRRDHPPPPLQECFFAFSAESIRKLKAKANGEIAGAAATISSLQALLAHVWRSVSRAHGLAPRQETAYVLVIGCRGRVSGISPGYVGNAVVPGAVRLTAGEVMERGLGWTAWQLNRFVASLDEAAMRGAIAPWPRAPEFSNFAKAAGGTAVHTGSSPRFDVFGNDFGWGRPVSVRSGGANKFDGKVTVYEGPGGAGSMSLEVCLAPAALGKLVADEEFMGATPYVKRTAERQTWRPPPAGWIKWFKARAAGVARWHSHGLDALIDDMMEALACRDGMYNLPALISRETDCRELWKQGGIQRWHICCADYQRCHTA |
||||||||||
| Function | Uncharacterized acetyltransferase At3g50280 [UniProtKB/Swiss-Prot:Q9SND9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_08g0000870 | OsGoSa_08g0000870.01 | Chr08 | 688071 | 696974 | - | NAM | ||
| CDS seq | atggaagccaacaccggcggcggcggcgtcctcgtcgtgtcacgccgcatgatccggccggagttcaaggagctgccgccggagcatgatacgacggttcacctgacgccgtgggatctccggctgctcaccgtggagaacatccagaagggcatcctccttcccaagccacccaccggcggcgagactctcgtcgaacacctggcgtcgtcgttcgctcgcgcactcggccgcttctaccccttcgccggccgcctcgtcgtggaagaggtggatggcggagcgtcgcctgcgagcagcgtatccgtctcgctgcgctgcaacgacgaaggcgctgagttcgtccacgccgcggcgcccgacgtcgccgtcgccgacatcgccgcctcgctgcacattccacgcgtggtctggtccttcttcccgctcaatggagtggttgctgcacacgccgcgacggaatccctgccggttctgtccacgcaggtcaccgagctctctgacggcgtgttcatcgccatgtctgtcaaccacgtcgtcggcgacggcaccaatttctgggagttcatgaacacatggtcggagatcagtcgaagtagcggcggcgaactgggcatctcgccatcggcgtcgacgtcgacttcgccgcctctggtggtcaagaggtggttcttggacaactgcacggtgccgatccctctgtcgttcgccaagctcgagcagatcatcccgcgaagcgagcaccaagcgccggtgcaggaatgcttcttcgctttctccgcggcgagcataaggaagctgaaggcgaaggcgaacgacgagatcgccggcgccgccgtcgctatctcctccctccaggcgctgctcgcgctcgtgtggcgcgcggtttcgcgagcccgcggcctcgcgccgcgccaggagacggcgtacgtggtggtcgtcgggtgccggggacgcgtgggcggcatctcgtcggggtacatggggaacgccgtggtgcccggcgcggtgaggctgacggccggcgagatcatggagagggggctcgggtggacggcgtggcagctgaacaagtacgtggcgtcgttcgacgaggcggccatgaggggcgcGCtggcgtcgtggccgcggcggccggacttcttctccgtcctgagcctgctcggcggcgccgccatcatcacggggagctcgccgcggttcgacgtgttcggcaacgacttcgggtgggggaggccggcgaccgtgcggagcggcggcgcgaacaagttcgacggcaaggtgacggtgtacgagggGccgggcggtgccgggagcatgtcgctggaggtttgcctggctccggcggcgctggggaagctcgtcgccgacgaggagttcatgggcgcgttgccgccggagcatgagacgacggtgcacctgacgccgtgggatctccctctgctcactgcggagtacatccagaagggcgtcctcctgcccaagccgcccaccggcggcgagcacctcgtcgaacacctggcgtcgtcgttcgctcgcgcactcggccgcttctaccccttcgccggccgcctcgccgtggccgaggtggaggacggagcgtcgcctccgagcagcatctccgtgttcttgcgctgcaacgacgaaggcgctgagttcgtccacgccacggcgcccgacgtcgccgtcgccgacatcgccggctcgctgtacattccgcgggtggtctggtccttcttcccgctcaccgggctgcttcccgcggtcgctgcggcggactccctgccggttcttgccgcgcaggtcaccgagctctccgacggcgtgttcatcgccatgtcgctcaaccatgtcgtcggcgacggcaccaatttctgggagttcatgaacacatggtcggagatcagtcgaagcagaagcaaactggacatctcgccgtcgccacctctggtggtgaagaggtggttcctggacacctgcccggtgccgatccctctgccgttcgccaagctcgagcacatcatcccgcgacgcgaccacccaccacctccattgcaagagtgcttcttcgctttctccgcggagagcataaggaagctcaaggcgaaggcgaacggcgagatcgccggcgccgccgccaccatctcctccctccaggccctgctcgctcatgtttggcgctcggtgtcgcgagctcatggcctcgcgccgcgccaggagacggcgtacgtactggtcatcggttgccgggggcgcgtgagcggcatctcgccggggtacgtggggaacgccgtcgtgcccggcgcggtgaggctgacggccggcgaggtcatggagagagggctcgggtgGacggcgtggcagctgaaccgcttcgtggcgtcgctcgacgaggccgccatgcggggcgcgatcgcgccgtggccgcgggcgccggagttctccaacttcgcgaaggcggcgggaggcaccgccgtccacacggggagctcgccgcggttcgacgtgttcggcaacgacttcgggtgggggaggccggtgagcgtgcggagcggcggcgcgaacaagttcgacggcaaggtgacggtgtacgaggggccgggcggtgccgggagcatgtcgctggaggtttgcctggctccggcggcgctggggaagctcgtcgccgacgaggagttcatgggcgcgaccccgtacgtaaagcggactgctgagcggcaaacgtggaggccaccgcccgcagggtggatcaagtggttcaaagctagggcggccggcgtagctagatggcattcccatggcctggatgctctcatcgatgacatgatggaggcccttgcttgccgggatgggatgtacaacttgccggccttaatttcccgagagacggactgtcgagagctgtggaagcagggtggcatccaaagatggcatatatgctgcgccgattaccagagatgccatacagcttag
More
|
|||||||
| Protein seq | MEANTGGGGVLVVSRRMIRPEFKELPPEHDTTVHLTPWDLRLLTVENIQKGILLPKPPTGGETLVEHLASSFARALGRFYPFAGRLVVEEVDGGASPASSVSVSLRCNDEGAEFVHAAAPDVAVADIAASLHIPRVVWSFFPLNGVVAAHAATESLPVLSTQVTELSDGVFIAMSVNHVVGDGTNFWEFMNTWSEISRSSGGELGISPSASTSTSPPLVVKRWFLDNCTVPIPLSFAKLEQIIPRSEHQAPVQECFFAFSAASIRKLKAKANDEIAGAAVAISSLQALLALVWRAVSRARGLAPRQETAYVVVVGCRGRVGGISSGYMGNAVVPGAVRLTAGEIMERGLGWTAWQLNKYVASFDEAAMRGALASWPRRPDFFSVLSLLGGAAIITGSSPRFDVFGNDFGWGRPATVRSGGANKFDGKVTVYEGPGGAGSMSLEVCLAPAALGKLVADEEFMGALPPEHETTVHLTPWDLPLLTAEYIQKGVLLPKPPTGGEHLVEHLASSFARALGRFYPFAGRLAVAEVEDGASPPSSISVFLRCNDEGAEFVHATAPDVAVADIAGSLYIPRVVWSFFPLTGLLPAVAAADSLPVLAAQVTELSDGVFIAMSLNHVVGDGTNFWEFMNTWSEISRSRSKLDISPSPPLVVKRWFLDTCPVPIPLPFAKLEHIIPRRDHPPPPLQECFFAFSAESIRKLKAKANGEIAGAAATISSLQALLAHVWRSVSRAHGLAPRQETAYVLVIGCRGRVSGISPGYVGNAVVPGAVRLTAGEVMERGLGWTAWQLNRFVASLDEAAMRGAIAPWPRAPEFSNFAKAAGGTAVHTGSSPRFDVFGNDFGWGRPVSVRSGGANKFDGKVTVYEGPGGAGSMSLEVCLAPAALGKLVADEEFMGATPYVKRTAERQTWRPPPAGWIKWFKARAAGVARWHSHGLDALIDDMMEALACRDGMYNLPALISRETDCRELWKQGGIQRWHICCADYQRCHTA
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 1.911565 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0112300 | RBH | 0.849318 | 1.003973 | 0.266946 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g02030 | RBH | 0.566318 | 0.665809 | 0.067756 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0112300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0000870 | RBH | 0.0 | 0.909262 | 2.871330 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0000880 | RBH | 0.0 | 0.654937 | 1.145858 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0000890 | RBH | 0.251580 | 0.0 | 1.976283 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0000880 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0000850 | RBH | 0.0 | 0.000000 | 1.391108 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0010500 | RBH | 0.2892975 | 0.004385 | 0.0396215 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0000800 | RBH | 0.0 | 0.0 | 0.433899 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0011000 | RBH | 0.502756 | 0.076064 | 0.0231985 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0000920 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0000830 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0009980 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0000850 | RBH | 0.0 | 0.032118 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0000870 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G000900 | RBH | 0.0 | 0.545325 | 0.433683 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0000860 | RBH | 0.0 | 0.0 | 1.345536 |
