Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_07g0026440 | OGI:07067180 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr07:28434590-28454778 | ||||||||
| Gene Symbol | OsSDR110C-MI2, SDR110C-MI2, OsSDR110C-MI3, SDR110C-MI3, SDR7-6, OsSDR7-6, TS2, _ | ||||||||||
| DNA seq | gaagaagcagaagaaacagatcaagatgttcagagcattgcagatcgtcctcaggtatagttttacattacatgatcctagctgcaaattaaagcttcatcactgtcaagatcttcttggattaagaacaagaacagcttaattagttagatgtgtttttgtgcaattttatatacttaatcacttctgtgttgggtgcaggggtaagagccgaggatttgtcagtcacttctcctccacggcttcaaattctgaaaggttgcaaactttcagcatcaatttatgtttgattttattttttacacttttgtgtttggttgcttgcgagttgtgaatcatggagaagtattgcgccgtgacgtttgatttttgtattttttttggtttgcaggttggctgggaaggtggcggtgatcaccggcgcggcgagcggcatcggcaaggcgaccgcggcggagttcgtcaggaatggcgccaaggtcatcctcgccgacgtccaggacgacgtcggccgcgccgtcgcctcggagctcggcccggacgcggcgtcctacacccgctgcgacgtcaccgacgaggcgcaggtcgcggcggccgtggacctcgccgtggcgcggcacgggcagctcgacgtcatggtcaacaacgccggcatcgtgggctccctggcgcgccccccgctcggcgccctcgacctcgccgacttcgacgccgtcatggcggtgaacgcgcggggcgtcctcgcgggcgtcaagcacgccgcgcgcgtcatggcgccgcgccgccgcggcagcatcatctgcgtggcgagcgtcgccggggtgctcggcagcgtgacgccgcacccgtacagcgtgtccaaggccgccgtgctcggcgcggtccgcgccgccgccggcgagatggcgcgctccggcgtgcgcgtgaacgccatctcccccaactacatcccgacgccgctggtgatgcgcatcatggcggagtggtaccccggggcgagcgccgacgagcaccgccgcgtcgtggagcgggagatcaacgagatggagggcgcgacgctggagccggaggacatcgcgagggcggcggtgtacctggcctccgacgaggccaagtacgtgaacgggcacaacctcgtcgtcgacggcgggtacaccgtcggcaaggcgcccaacctgccggcgccgccgcaataatcaacacgagaatcggcgagcgaataatagcaacaattatgcattattactccgctaatgaacaaatcatatgctttttttgcatcgatcaaatgcattgttgtgttgggatcaaatgccttttgtttggagtggatgaggttttgggctttttgcccacgacaaacaatgtcaagagatactgctccaagtcttcttctttctttgtttaattaaatttcacaaaacgaaagatatatcgattaaattatcacaaaactatatttaaaatggtgtatcagaaaactacagagttagcactaaatgtaccataaaattacaaatttaaggtgaaatatcacaaaactatagatttattaataaagttatcacaaaccaacacgtttagctttgtaatacttttattattaaatttatagttttgtgatacttagtcttaaacttatagttttgtgataaatttattgttaaatatgtagttttgtgatacatcaccttaaatatgaagtttggtgataatttgatcaaaatacctatattttgtgattttttttcttgaaaggattaaagaaagaaatgctattccaagtttgcgacgcgtcggtcacaagatccaaagctcgcatgcaaatgcagtccaacagcgggaaactattttaacagctcgagtggatgtccacccgtttattgcatgtcatctaaataattatgaaaaaaataaaaaaatatgaataagatagatcaatatgtaatgtatcaatctacaaacatacatgttaaaatttaacttctacatattgtaacaaaaataacaaacAaaactcaaattactatatgtatatttacagtcaaatttattatttttattacaactggtagaagttgaattttaacttgcatgtttgtggagtgatatattacatattgatatatcttgttttttttttttgaaaatttttcgtaaccatctagttgacatgcaataaacggatggacatacactcgagctattagaatccatctccgctagctagctccaaaatccgtatactgacgcacgaagtgagaataattcaactggttaggatttaggaatcagtctacccaaatttaaattctaaattttacatgggtgcttgcatttaagactaattatcacctggatttaaatcctaaatttgacatagatgctcgcatttgtgacttattattaaaaaaaatccgtatattctattacacaactattattttattaaaatagatgggtaccccacgcgttgctgtcgaagaattatatggtaaaatagtagatatgagttatgaaattttatttcttacttactatatcattttctttaatgtgcttatatatttagcacttatctaaagattataagtgactgtgttgttactatcttttggggagaagagatgcaattgcgccgttgataaaactatccaatgacgaaaaacaattaagatgatgtggcttcattaaagaggagagaattagcattatctatacttggtgcagataaactttatagatatataggattcacacacgtgccagcacactataaggctgtgttccgtttcaggggatgggagctaatccctcccgcatgaaaaaaggagcgatccattagtgcgtgattaattaagtacagaaaaactaggaaatgggattccgttcaacgggataacctacatacatgcagtggcttacatggagagatcaacctagctctatacaaaaggtaagggcccacatgcatgtcctatcctttttttctcatctatccatgcagcttataggcccacgtgcatgtgcgtacatgcttgacgttgtgctcctgcatgtacggtgcccacatgactttggaaaagaggtcgatcaattccatgcattaattaatcatcaatagtgaatacacttattagatcactagtacagaaatataatccctcatacctaatatgtattataactaaaaaaatatagtgcaaaaaatggttccttggatccgatacctacatatatcgtaactgatatctcacaagtatcatcactagtacccatgtatcatcaccaatacctgataggtatcatcactagtaccaaataggtatcgtcaatggttccatgtatcattaccggtacctacatgtatcatcatcggtacctcacagatatcatcactaataccagacatatatcgttattggtacccatgtatcatcaccaatacctgacatgtatcatcaattggtagctatatgtatcttcaccgatacctcacaagtattatcaccggtacctacatgtattatcatcgatactgggtatcgaccaacccagattgttacaactgatatcataggtaccatcgagatacttggtacctatatcagcatgattcccatatgtaccagatctgggactgggtatcgggtatttggctatcaagtacctggtacctagattggtctgatacctataggtaccatacctagtactaggtatcagggtacatgagatatcatatacctaataccagctgagtatcgggtactaggtacctggtacctgaattgatgttgaacgatacctgttggtatcgggcctggtatcagatattagctttagtatcaaatatcaacttacatgccacgtcacatacatgcaactagcaacacagccacgtcacatgcatgcatgtagctagcaacacagccatgagtaatcagtagaacgctacctgagaggaagcaggtggtgggggcccctagtgatgtggaagggtatctcgttcccacgggatcccgtggtctagctatcctcgttaagtattagctttttttttttcaaaaatagattaatttaattttttaagcaactttcgtatagaaactttttttaaaaaaaagcacagtttagcagttttaaaagcgtgtgcgcgaaaaacgagggagaggggttgggaaaaggggtgcctcaagagtccgggttggtaactcttgcctccataatagaaaacggagtgatccattagcgcgtgattaattaagtattagctattttttttaaaaaaATagaataatataattttttaaacaactttcgtatataaactttttttaaaaaaacgcaccgaaatagcagtttgaaaagtgtgcgcgcggaaatcgagatagggGAgttcctaacctggactctcgaacgcagccaagtatgcatatttttcggcccaccaggccacatgctgtgttttctttctttacccggcccaccagtccaggtgaggtgtttcccttttttcgcgcgagttttggcacactgtgttcacgcgtttcctatccttttttttaattttattttctgacattttagggaggaaaatggatgagaacatagtacaataaagtacatgtgttaccgacttttcgatagttaggtcattctttttttctctctctcgaaatttatccctttttaattacgcaggccggtcgtctgcttcgtcgtcctcgatcggccagagaatattaatctgcttctctatataatctgtttctcttagctcgttcgtttttgctcaggcaagctcagagcttgattaggtacatcatgttcacagcgatgcatcgcgtcctcatcaggtatggcagattcttgcagctgttcttccattcggatttcggagtgaagataactgtggaaatgcagggggagaaggatacctgcagcttcgtcttcctccctcactgccttcgctacagcctccgattcgcagaggtgag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tatataaagttaactgttgactattagcttacattaaaactaacatctataataagttaacaataaagttgactatattttttctctcgtatcactataaatatcttgaaacatgattttctttatatctttcttctacaaacttatagcccattaattattattacattgctttaatgtagcttcttgcataactgcgcgatgaaattcggctagttccaagacggttcaacgcatcctcatgtccgctgctttgtacgccgagtgtccgccgtcgacaacgaggttgtggccggtcacgtacttggcctcgtcggatgccaggtacaccgccgccgccgcgatgtgttccggcgccatgacgacgtcgtcattcgccatgatctgcttcagctcctcctcgctgcttgtccccaacatctcggcgaacgtgcgccttagcagcggcgtcctgacgccgcccggcgagatggcgttcacccgcacgccgtggcgcgccagcggctccgccgtggcgcgcacgatggcgatcgcggtggccttggagatggcgtacatggggatgctcgggacggagagcacccccgcggcgctggccgtgcagaggacgcagccggagcggcgcggcgccatgacgcgcgcggcgtgcttgatgccggcgagcaccgcgcgggcgttcaccgccatcacgcggtcgaagccggcgaggtccatggacgccaggtcgtcctgacgccgtacggtcccggagacgccggcattgttgaagaggacgtcgaggtggccgtggcgctccacggcgaggtcgacggccgcggcgacctgcgcctcgtcggcgacgtcgcagcgcgtgtacgcggcgtcccggccgagctccgccgccacggagcggccgaggtcgtcctggacgtcggcgatgatgaccttggcgccgttcttgatgaactctgcggctgtcgcgttgccgatgccgctggcaccgccggtgatgactgcaaccttgccggccaacctgcaagtgcatcaaacacataatcaacgtgagaacgagcagctcaaaataattaaccatttaattaattgattacttctgggagctggaagaagcagtggagaagcgagagaagaaagctggagaagtggttgtccggccaagaactctgttcgtctccctgcgacaatgcacacatgcaatattcagagattcagtgagcttagatttgggagtggtaatgttgatcgaacattccaactcatttgaacctgagaatgagctgcgccgttgatctgaacatcatcctgctcgatcgatcttaggttgggtatcagatgatcgtcgtttcgttggttaccttgatcaagaggtggtgtgcacacaagaacgctgcgatagattgaactctgcttaaaaaggccaggcagctcaccttatgtttaggggctgtctatatatcatgtgacataaaatttcacctcctatcattcgaattttggaccatttgatgtgctttaagattcgtgcagaccatttaacctaactcctctcctcctcccccggttccagatcacgccgccaccctcttcctcccatcccacgcgcgatccaccaccgccaccaccgccactgccccaccgcgccgccgctcgcctcgccggctggccggaaaaggtcaacggcgccggcgaaccccctccccCTCCCCCTTCCCCTTCCCCCCTCACTTTCTCCTCATGGCGGCGACAACGAGGTGCCCCCGCCCCGCCGTCTTCCCGGTCTCCGGCAGCTCCCCACCGCCGGATCCGCCACCACCGGCCGCCGCCTCCTAATCCCACGCTTGCTTTGCCCCTGCCGCCGACGCTGGCCCACCGCCCTCCTCCATCCCCGCGGCTTCGGCGGCGTCGCCGCTGCCTCGCCGCCCGCCGGAGTCCACCGCCCACTGCCGGTCCTCCGCCGCCCACGGCCATCCCTCTAAGCCCCGAGGAAACCCCTCTCTTCCCCCTCCCTCAACCCCCCCTCCTATCCTCACCCCAACCcccaaaccctaacccgccggagttggggtgtcgctggcgccagagaagaaggggagcccgccggagttggaggagagaagccaatgcacgaatcttggtatggatccaatgatccaaaaactgtaagattttatccccaaatttcattcgaatgccatatagcaatctcaaaaaaaaaaaaaaaagaggtaagatcactatcactccacggaaaaacagggcgacgccggcatgaatgatgtgctgaattaacgaatgaatgggccgggcatgcacggagtggaccaactcattcatttttctcaagttaaggaagatgattaattgattatatctccggcctatgtatctatgctgtgttcttttgctggctttcccaacttacctttttttttcgtatgtatgttttttaattgttaaacggtggtgtgtgttttgtaaagagtaatggagaagtagaaggagaagattattcaaccatattaatgtttaattaacctcaagcttgttgacacgatagggaaatataaatcttatgagtatatgagtttataaaaaatgatgatcaaatattataatgcttgatttaagacaaaccaagtaatttgaaacagaggattaaattttggcccgattatctcacatgacatccttgctcattctaaagtctaaacccacttgttgtctagttttgacttcaccgttgaccacgcttgtcctcaagtaaacatgcatactatagataaaccaagagaacttcaatatatttggtctcttttgaaacacgcgattaacaaaacatagaaatatgaaaagtataggatttttgcaggaatgcaaatacAaaacacagaaaaaaaaagaacgatttgtttgaatagatatagaccgtaggaatcaaatgcgagagataaactcaaagaaaaattttctgagaggttagaacttttgctaattttttcttcaaaatctatatacattgagccattcctttggaatttcatagaatttaaaaagctcaaatcctttatttcaaagagccaaataggaacatattctatgggatttgaatctacaaaattcattcacaaatccttcgtctctcaaaagggccttaacgtaataaatatcaaacatactccaacaataatcgaaaagaaaaagaaaggatattcaaccacattaatatccagttaagtttgagcgcggccaaccaccttgaagaaaaatccaaccacgtgatttgaaaaattgctacgcgtacgatgaaattcgtactacgttaggtcccatatttatcgcatacaccagagactctgtgttcgggaggaggggtctccccggcacgcaaaataaaacatctattattgtataattaattaattatttactattttttttAaaaaatagattaatatgattttttaagcaaatttcgtatataatttttttttaaaaaaacagtttagcagtttgaaaagcgtgcgcgcggaaaataagggaGggaggttggaaaagggaggtaacgaacggagctacatgtattgtactatcatcgtatcaagtttagtatcgtactatcgtcgtatgaagttatatcgtacgtattagactgctgcgtggtctgtgtatcaataaatacatttctcgtacgatctatatatatgacgactcctgtggtatatgatgcgtgcaatgcctccttttctttttctatagaagttctcatgttccccaagtcaaaccatacggtggaattgatgaaagaatgcacggtttgtaatgacggtgaggtttgtgagttactattctctttcatgagggcgcctcttctgtgttttttcttcgactcgatgtaccatattttacacacaaaaatttgatactttaagatactaaattttacactagaatgtatcttaagatactttaaggtactaaattttacactagaaagtatcttaaggtactAaaagtttgtgatattttaagatgctaaattttatactagaaaatatcttgaggtactaaaagtttatggtactttaaggtacttaaattttacactaaaaagtactaccgaacgttggatgataaaattgctcgttcatactggtttaatggcccatcaactttgatatttgcacatggcccattcacatcatctcggacaatatcgttaacaaatgatggtgtggttatatttataatgccgcattttctatataagaaatcatcctttgacagtacaaatcaacatggtaactacgttataaatttaaaacttaaaactgtaaatttcaatactaatattgtaaatttttctagtacactatataagagaattcgataaaaacaatcgattatttacttgagaaagtagatagaagagatagaaacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacactttacatgaaaatgtaaaagagatgacaatcacataggctaaaacgactgcagaaatcaagcttaaaaatgtaacaccatattttctattagcaaaaccacaaaatcatctccgataacgttggcatcgcggcgcaaccggtggtcaaattaattgactgaattaattactgcttcgtAaatcctccatttcgtgtgttcgactgacactagcactgatcaggacaagagaaaaagggaagaagaagccaaagccattgtgctatctctcgcagaaagataggagagcctgatagggagatgaccatatgcggctgatctaccatctacttcacagtagtagaatttcatagcatgctaggtAaaaacggaactctttcggatcataaatatta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caactaattaatcgatcgaacacccttgttcgtcgactcgtcagaataataagggcaggtacaacgcactgtcccttgccgtagacatgcagaaaaaaattgcaaacaCccccccgcgaccatcgttcgatgcaaagccggcgtctggttcagctacggctgtggctcgtggtcctaggcgcggggaca
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| CDS seq | atgttcagagcattgcagatcgtcctcaggggtaagagccgaggatttgtcagtcacttctcctccacggcttcaaattctgaaaggttggctgggaaggtggcggtgatcaccggcgcggcgagcggcatcggcaaggcgaccgcggcggagttcgtcaggaatggcgccaaggtcatcctcgccgacgtccaggacgacgtcggccgcgccgtcgcctcggagctcggcccggacgcggcgtcctacacccgctgcgacgtcaccgacgaggcgcaggtcgcggcggccgtggacctcgccgtggcgcggcacgggcagctcgacgtcatggtcaacaacgccggcatcgtgggctccctggcgcgccccccgctcggcgccctcgacctcgccgacttcgacgccgtcatggcggtgaacgcgcggggcgtcctcgcgggcgtcaagcacgccgcgcgcgtcatggcgccgcgccgccgcggcagcatcatctgcgtggcgagcgtcgccggggtgctcggcagcgtgacgccgcacccgtacagcgtgtccaaggccgccgtgctcggcgcggtccgcgccgccgccggcgagatggcgcgctccggcgtgcgcgtgaacgccatctcccccaactacatcccgacgccgctggtgatgcgcatcatggcggagtggtaccccggggcgagcgccgacgagcaccgccgcgtcgtggagcgggagatcaacgagatggagggcgcgacgctggagccggaggacatcgcgagggcggcggtgtacctggcctccgacgaggccaagtacgtgaacgggcacaacctcgtcgtcgacggcggggggagaaggatacctgcagcttcgtcttcctccctcactgccttcgctacagcctccgattcgcagaggttggccgggaaggtcgccgtcatcaccggcggcgccagcggcatcggcagggcgacggcggaggagttcgtcaggaatggacgacctgggacacgccgtcgccgcggagctgggcgcggacgcggcgtcgtacctcggcgctgcgacgtcaccgacgaggcgcaggtcgcggcggccgtggacctcgccgtggcgcggcacgggcgtctcgacgtcgtcttcaacaacgccggcatccccggcgacctcatgccgaccccggtgagcgcgctggacctcgccgacttcgatcgcgtgatggcggtcaacacccgggcggtggtggcgggcgtcaagcacgccgcgcgcgtcatggtgccgcgccgccgcggcagcatcatctgcacggcgagcacggcgggcgtgatcggcggggcgatcccgcactacagcgtgtccaaggccatggtgctcggcctggttcgcgccgtggcgggcgagatggcgcgctccggcgtacgcgtgaacgccatctcccccaactacatctggacgcccatggcgatggtctccatgaccgcgctatacccagaccggagcaccgacgagcaccgccggatcgtggaggacataaacgagatggaaggcgcgacgctggaggccgaggacgtggcgagggcggcggtgttcctcgcctccgacgaggccaagtacgtgaacgggcacaacctcgtcgtcgacggcggggggaggaggacacctgcagcttcgtcttcctccatcactgccttcgccgccgcctccgattcgcagaggttggccgggaaggtcgccgtcatcaccggcggcgccagcggcatcggcagggcgacggcggaggagttcgtcaggaatggcgccaaggtcatcctcgccgatgtgcaggacgacctgggacacgccgtcgccgcggagctcggcgcggacgcggcgtcgtacgcgcgctgcgacgtcaccgacgaggcgcaggtcgcggccgccgtggacctcgccgtggcacggcacgggcgtctcgacgtcgtcttcaacaacgccggcatccccggtgacctcacgccgacccccgtgggcgcgctggacctcgctgacttcgaccgcgtgatggcggtgaacaccagggcggtggtggcgggcgtcaagcacgccgcgcgcgtcatggtgccgcgccgccgcggcagcatcatcttgttaaggtcctggctgggctgccaaatgggccagcccatcaactctcctaatattaccgagtttggaaggagaggcacggcgggggtgatcggtggcgtggcggtcccgcactacagcgtgtccaaggccgcggtgctcgggctggtgcgcgccgtggcgggcgagatggcgcgctccggcgtgcgcgtgaacgccatctcccccaactacatctggacgcccatggcggcggtcgcctacgcaaggtggtaccccagccggagcgccgacgagcaccgccggatcgtggagaatgacataaacgagatggatggcgtgacactggaggccgaggacgtggcaagggcggcggtgttcctcgcctccgacgaggctaagtacgtgaacgggcacaacctcgttgtcgacggcgggtacaccgtcggcaaggtgcccaacatgccgaacaggatgttcagagctgcgcagctcctcctcagcggcatcggcaaagcaacagccaaggagttcatcgagaatggcgccaaggtcatcatggccgatgtccaggatgacctcggccactccgccgcggcggagctcggcccggacgcctcgtacacgcgctgcgacgtctccgacgaggcgcaggtcgcggcggccgtcgacctcgccgtgaagcggcatggccacctcgacatcctctacaacaacgccggcgtcatgggcgccatgccgcaggacgacatggcgtccgtcgacctcgccaacttcgaccgcatgatggcgatcaacgcccgggcggcgctcgtcggcatcaagcacgccgcgcgcgtcatgtcgccccgccgcagcggcgtcatcctctgcacggccagcgacacgggcgtcatgcccatgcccaacatcgccttgtactccgtctccaaggcgaccaccatcgccatcgtgcgcgccgcggcggagccgctgtcgcgccacggcctgcgggtgaacgccatctcgccgcacggcaccaggacggcgatgatgatgcacgtggtctcccagatgtaccccggcgtgagcaaagacgatttggagaagatggcggacgccgccatggacgccggagcggtgatggaacctgagtacgtcgctagggcggcgctgtatttggcttcggacgaggctaagtacgtcaacgggcacaacctcgtcgtcgacggcttctccatggattccaactccatccagcgtttggctggcaaggtggctgtcattaccggtggagccagtggcatcggcaaggttacagccaaggagttcatcaagaatggtgccaaggtcatcatcgccgatgtccaggacgagctcggccgctctgcggcggctgagctcggcccggacgcctcgtacacgcgctgcgacgtcatcgacgaggcgcaggtcgcggcggccgtggacctcgccgtgaggctccacggccacctcgacatcctctacaacaacgccggcatcatcggcgccatgccgcaggacgacatggcgtccgtcgacctcgccaacttcgaccgcatgatggcgatcaacgcccgggcggcgctcgtcggcatcaagcacgccgcgcgcgtcatggcgccgcgccgcagtggcgtcatcctctgcacggcgagcgacgcgggcgtcatgcccatcccgaacatcgccatgtactccgtctccaaggcgaccaccatcgccatcgtgcgcgccgcggcggagccgctgtcgcgccacggcctgcgggtgaacgccatctcgccgacgggcaccaggacgccgatgatgatgcatatcatctcccagatgacccccggcgcgggcgaggacgacctggagcggatggcggacgccgccatcagcgccggcgtggccatcgagccagagtacgtggcaagggcggcagtgtacctcgcctccgacgaggccaagtacgtcaacgggcataacctcgtcgtcgacggcggcttcacaacgcataaaggagatgacaatcgcatgaattaa
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| Protein seq | MFRALQIVLRGKSRGFVSHFSSTASNSERLAGKVAVITGAASGIGKATAAEFVRNGAKVILADVQDDVGRAVASELGPDAASYTRCDVTDEAQVAAAVDLAVARHGQLDVMVNNAGIVGSLARPPLGALDLADFDAVMAVNARGVLAGVKHAARVMAPRRRGSIICVASVAGVLGSVTPHPYSVSKAAVLGAVRAAAGEMARSGVRVNAISPNYIPTPLVMRIMAEWYPGASADEHRRVVEREINEMEGATLEPEDIARAAVYLASDEAKYVNGHNLVVDGGGRRIPAASSSSLTAFATASDSQRLAGKVAVITGGASGIGRATAEEFVRNGRPGTRRRRGAGRGRGVVPRRCDVTDEAQVAAAVDLAVARHGRLDVVFNNAGIPGDLMPTPVSALDLADFDRVMAVNTRAVVAGVKHAARVMVPRRRGSIICTASTAGVIGGAIPHYSVSKAMVLGLVRAVAGEMARSGVRVNAISPNYIWTPMAMVSMTALYPDRSTDEHRRIVEDINEMEGATLEAEDVARAAVFLASDEAKYVNGHNLVVDGGGRRTPAASSSSITAFAAASDSQRLAGKVAVITGGASGIGRATAEEFVRNGAKVILADVQDDLGHAVAAELGADAASYARCDVTDEAQVAAAVDLAVARHGRLDVVFNNAGIPGDLTPTPVGALDLADFDRVMAVNTRAVVAGVKHAARVMVPRRRGSIILLRSWLGCQMGQPINSPNITEFGRRGTAGVIGGVAVPHYSVSKAAVLGLVRAVAGEMARSGVRVNAISPNYIWTPMAAVAYARWYPSRSADEHRRIVENDINEMDGVTLEAEDVARAAVFLASDEAKYVNGHNLVVDGGYTVGKVPNMPNRMFRAAQLLLSGIGKATAKEFIENGAKVIMADVQDDLGHSAAAELGPDASYTRCDVSDEAQVAAAVDLAVKRHGHLDILYNNAGVMGAMPQDDMASVDLANFDRMMAINARAALVGIKHAARVMSPRRSGVILCTASDTGVMPMPNIALYSVSKATTIAIVRAAAEPLSRHGLRVNAISPHGTRTAMMMHVVSQMYPGVSKDDLEKMADAAMDAGAVMEPEYVARAALYLASDEAKYVNGHNLVVDGFSMDSNSIQRLAGKVAVITGGASGIGKVTAKEFIKNGAKVIIADVQDELGRSAAAELGPDASYTRCDVIDEAQVAAAVDLAVRLHGHLDILYNNAGIIGAMPQDDMASVDLANFDRMMAINARAALVGIKHAARVMAPRRSGVILCTASDAGVMPIPNIAMYSVSKATTIAIVRAAAEPLSRHGLRVNAISPTGTRTPMMMHIISQMTPGAGEDDLERMADAAISAGVAIEPEYVARAAVYLASDEAKYVNGHNLVVDGGFTTHKGDDNRMN |
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| Function | Secoisolariciresinol dehydrogenase (Fragment) [UniProtKB/Swiss-Prot:Q94KL7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0026440 | OsGoSa_07g0026440.01 | Chr07 | 28434590 | 28454778 | + | NAM | ||
| CDS seq | atgttcagagcattgcagatcgtcctcaggggtaagagccgaggatttgtcagtcacttctcctccacggcttcaaattctgaaaggttggctgggaaggtggcggtgatcaccggcgcggcgagcggcatcggcaaggcgaccgcggcggagttcgtcaggaatggcgccaaggtcatcctcgccgacgtccaggacgacgtcggccgcgccgtcgcctcggagctcggcccggacgcggcgtcctacacccgctgcgacgtcaccgacgaggcgcaggtcgcggcggccgtggacctcgccgtggcgcggcacgggcagctcgacgtcatggtcaacaacgccggcatcgtgggctccctggcgcgccccccgctcggcgccctcgacctcgccgacttcgacgccgtcatggcggtgaacgcgcggggcgtcctcgcgggcgtcaagcacgccgcgcgcgtcatggcgccgcgccgccgcggcagcatcatctgcgtggcgagcgtcgccggggtgctcggcagcgtgacgccgcacccgtacagcgtgtccaaggccgccgtgctcggcgcggtccgcgccgccgccggcgagatggcgcgctccggcgtgcgcgtgaacgccatctcccccaactacatcccgacgccgctggtgatgcgcatcatggcggagtggtaccccggggcgagcgccgacgagcaccgccgcgtcgtggagcgggagatcaacgagatggagggcgcgacgctggagccggaggacatcgcgagggcggcggtgtacctggcctccgacgaggccaagtacgtgaacgggcacaacctcgtcgtcgacggcggggggagaaggatacctgcagcttcgtcttcctccctcactgccttcgctacagcctccgattcgcagaggttggccgggaaggtcgccgtcatcaccggcggcgccagcggcatcggcagggcgacggcggaggagttcgtcaggaatggacgacctgggacacgccgtcgccgcggagctgggcgcggacgcggcgtcgtacctcggcgctgcgacgtcaccgacgaggcgcaggtcgcggcggccgtggacctcgccgtggcgcggcacgggcgtctcgacgtcgtcttcaacaacgccggcatccccggcgacctcatgccgaccccggtgagcgcgctggacctcgccgacttcgatcgcgtgatggcggtcaacacccgggcggtggtggcgggcgtcaagcacgccgcgcgcgtcatggtgccgcgccgccgcggcagcatcatctgcacggcgagcacggcgggcgtgatcggcggggcgatcccgcactacagcgtgtccaaggccatggtgctcggcctggttcgcgccgtggcgggcgagatggcgcgctccggcgtacgcgtgaacgccatctcccccaactacatctggacgcccatggcgatggtctccatgaccgcgctatacccagaccggagcaccgacgagcaccgccggatcgtggaggacataaacgagatggaaggcgcgacgctggaggccgaggacgtggcgagggcggcggtgttcctcgcctccgacgaggccaagtacgtgaacgggcacaacctcgtcgtcgacggcggggggaggaggacacctgcagcttcgtcttcctccatcactgccttcgccgccgcctccgattcgcagaggttggccgggaaggtcgccgtcatcaccggcggcgccagcggcatcggcagggcgacggcggaggagttcgtcaggaatggcgccaaggtcatcctcgccgatgtgcaggacgacctgggacacgccgtcgccgcggagctcggcgcggacgcggcgtcgtacgcgcgctgcgacgtcaccgacgaggcgcaggtcgcggccgccgtggacctcgccgtggcacggcacgggcgtctcgacgtcgtcttcaacaacgccggcatccccggtgacctcacgccgacccccgtgggcgcgctggacctcgctgacttcgaccgcgtgatggcggtgaacaccagggcggtggtggcgggcgtcaagcacgccgcgcgcgtcatggtgccgcgccgccgcggcagcatcatcttgttaaggtcctggctgggctgccaaatgggccagcccatcaactctcctaatattaccgagtttggaaggagaggcacggcgggggtgatcggtggcgtggcggtcccgcactacagcgtgtccaaggccgcggtgctcgggctggtgcgcgccgtggcgggcgagatggcgcgctccggcgtgcgcgtgaacgccatctcccccaactacatctggacgcccatggcggcggtcgcctacgcaaggtggtaccccagccggagcgccgacgagcaccgccggatcgtggagaatgacataaacgagatggatggcgtgacactggaggccgaggacgtggcaagggcggcggtgttcctcgcctccgacgaggctaagtacgtgaacgggcacaacctcgttgtcgacggcgggtacaccgtcggcaaggtgcccaacatgccgaacaggatgttcagagctgcgcagctcctcctcagcggcatcggcaaagcaacagccaaggagttcatcgagaatggcgccaaggtcatcatggccgatgtccaggatgacctcggccactccgccgcggcggagctcggcccggacgcctcgtacacgcgctgcgacgtctccgacgaggcgcaggtcgcggcggccgtcgacctcgccgtgaagcggcatggccacctcgacatcctctacaacaacgccggcgtcatgggcgccatgccgcaggacgacatggcgtccgtcgacctcgccaacttcgaccgcatgatggcgatcaacgcccgggcggcgctcgtcggcatcaagcacgccgcgcgcgtcatgtcgccccgccgcagcggcgtcatcctctgcacggccagcgacacgggcgtcatgcccatgcccaacatcgccttgtactccgtctccaaggcgaccaccatcgccatcgtgcgcgccgcggcggagccgctgtcgcgccacggcctgcgggtgaacgccatctcgccgcacggcaccaggacggcgatgatgatgcacgtggtctcccagatgtaccccggcgtgagcaaagacgatttggagaagatggcggacgccgccatggacgccggagcggtgatggaacctgagtacgtcgctagggcggcgctgtatttggcttcggacgaggctaagtacgtcaacgggcacaacctcgtcgtcgacggcttctccatggattccaactccatccagcgtttggctggcaaggtggctgtcattaccggtggagccagtggcatcggcaaggttacagccaaggagttcatcaagaatggtgccaaggtcatcatcgccgatgtccaggacgagctcggccgctctgcggcggctgagctcggcccggacgcctcgtacacgcgctgcgacgtcatcgacgaggcgcaggtcgcggcggccgtggacctcgccgtgaggctccacggccacctcgacatcctctacaacaacgccggcatcatcggcgccatgccgcaggacgacatggcgtccgtcgacctcgccaacttcgaccgcatgatggcgatcaacgcccgggcggcgctcgtcggcatcaagcacgccgcgcgcgtcatggcgccgcgccgcagtggcgtcatcctctgcacggcgagcgacgcgggcgtcatgcccatcccgaacatcgccatgtactccgtctccaaggcgaccaccatcgccatcgtgcgcgccgcggcggagccgctgtcgcgccacggcctgcgggtgaacgccatctcgccgacgggcaccaggacgccgatgatgatgcatatcatctcccagatgacccccggcgcgggcgaggacgacctggagcggatggcggacgccgccatcagcgccggcgtggccatcgagccagagtacgtggcaagggcggcagtgtacctcgcctccgacgaggccaagtacgtcaacgggcataacctcgtcgtcgacggcggcttcacaacgcataaaggagatgacaatcgcatgaattaa
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| Protein seq | MFRALQIVLRGKSRGFVSHFSSTASNSERLAGKVAVITGAASGIGKATAAEFVRNGAKVILADVQDDVGRAVASELGPDAASYTRCDVTDEAQVAAAVDLAVARHGQLDVMVNNAGIVGSLARPPLGALDLADFDAVMAVNARGVLAGVKHAARVMAPRRRGSIICVASVAGVLGSVTPHPYSVSKAAVLGAVRAAAGEMARSGVRVNAISPNYIPTPLVMRIMAEWYPGASADEHRRVVEREINEMEGATLEPEDIARAAVYLASDEAKYVNGHNLVVDGGGRRIPAASSSSLTAFATASDSQRLAGKVAVITGGASGIGRATAEEFVRNGRPGTRRRRGAGRGRGVVPRRCDVTDEAQVAAAVDLAVARHGRLDVVFNNAGIPGDLMPTPVSALDLADFDRVMAVNTRAVVAGVKHAARVMVPRRRGSIICTASTAGVIGGAIPHYSVSKAMVLGLVRAVAGEMARSGVRVNAISPNYIWTPMAMVSMTALYPDRSTDEHRRIVEDINEMEGATLEAEDVARAAVFLASDEAKYVNGHNLVVDGGGRRTPAASSSSITAFAAASDSQRLAGKVAVITGGASGIGRATAEEFVRNGAKVILADVQDDLGHAVAAELGADAASYARCDVTDEAQVAAAVDLAVARHGRLDVVFNNAGIPGDLTPTPVGALDLADFDRVMAVNTRAVVAGVKHAARVMVPRRRGSIILLRSWLGCQMGQPINSPNITEFGRRGTAGVIGGVAVPHYSVSKAAVLGLVRAVAGEMARSGVRVNAISPNYIWTPMAAVAYARWYPSRSADEHRRIVENDINEMDGVTLEAEDVARAAVFLASDEAKYVNGHNLVVDGGYTVGKVPNMPNRMFRAAQLLLSGIGKATAKEFIENGAKVIMADVQDDLGHSAAAELGPDASYTRCDVSDEAQVAAAVDLAVKRHGHLDILYNNAGVMGAMPQDDMASVDLANFDRMMAINARAALVGIKHAARVMSPRRSGVILCTASDTGVMPMPNIALYSVSKATTIAIVRAAAEPLSRHGLRVNAISPHGTRTAMMMHVVSQMYPGVSKDDLEKMADAAMDAGAVMEPEYVARAALYLASDEAKYVNGHNLVVDGFSMDSNSIQRLAGKVAVITGGASGIGKVTAKEFIKNGAKVIIADVQDELGRSAAAELGPDASYTRCDVIDEAQVAAAVDLAVRLHGHLDILYNNAGIIGAMPQDDMASVDLANFDRMMAINARAALVGIKHAARVMAPRRSGVILCTASDAGVMPIPNIAMYSVSKATTIAIVRAAAEPLSRHGLRVNAISPTGTRTPMMMHIISQMTPGAGEDDLERMADAAISAGVAIEPEYVARAAVYLASDEAKYVNGHNLVVDGGFTTHKGDDNRMN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 1.074969 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0664000 | RBH | 0.328759 | 0.271747 | 2.179168 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g46940 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0663900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0021740 | SBH | 0.000000 | 0.000000 | 2.932166 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0021770 | RBH | 0.000000 | 0.491076 | 0.081963 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0021660 | SBH | 0.000000 | 0.000000 | 1.110588 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0026340 | RBH | 0.022496 | 0.102586 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0021620 | RBH | 0.0 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0454700 | RBH | 9.6727335 | 24.428213 | 2.8438605 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0027080 | RBH | 0.000000 | 0.000000 | 0.023597 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0467400 | RBH | 0.3103655 | 0.0361435 | 1.5709715 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0026430 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0026830 | RBH | 0.0 | 6.555653 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0026490 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0026890 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0021390 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G026530 | SBH | 0.0 | 0.438149 | 2.376935 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0021350 | SBH | 0.000000 | 2.304406 | 1.318664 |
