Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_07g0021830 | OGI:07068050 | 14/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr07:25189204-25198235 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GTAGTTCTCGAGGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGTCGGCGGCGGCGGCCATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGGTGAGCTTTTCTCCGCAGGCTGTGCCCTCCCCGCCTCCCCGCCCCATGCTCTCCCTGCAAAGTGCTTGGAGGATTGGGGGCGTCAGATTACTGGAGCTATGTAGGATCCGAGATTGGTCTACGGAAGATTCCTGGAGGACTGGAGTTGTGACTGGTAGTTTGCTCCGATCGAGTTGCATACTTGCCTGTCGCCATAGCTCTTGCTGTTTTCTTAGGTTTAGGTAGTTCTCAACATGCTGGGTTGGTTGGAGCAGTGTCCTTTTCTATTTGGTGAGCTGTCATGTGACTCGAACTCGCTTCGAGGGCTTCGTTTCTCATAGGAGCTCATTTTCAATTTATTTGTAGTTCTAGTAGTATATAAGAAAAGGTTCATCGATCTACATGTTGAACTAGTAACCAATCAATTTTGAACTGTAGTTGAATGttatatcaccaagtgttgagtaactagttctctttcttttttttagactaaacttaacattaccgagttactcatggataaacacctttttcacagttgatgatatattgaggatttatacatgtGtttagtactattttatcccgtgcttttttatcaaaatgaatctgtcagtggctgtttactatttagcttatgttgacatttgtttctactatgtctcaccttaccactctcctagcagaacctgtacttattgaccaagtgtcctgtgaactttataatccagtttgttagttcaactaattggtatgttatgggataacttatctcccgcacatcaaattttcagttagtcaactacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatgagtttggagaggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgcttgttgaagagtgggtagagctggcaaatggatgtgtttgttgcacggtgaaacacagcctggttcaagcacttgagcagcttgtgcagagaaaggagaggtaaatacggatgttgctgtcttgcatggatatgtagcatacaccatttgatcctataagtatgtgtcctactattatgttttattccctatgattttcagtacaaagtgatgtcatgatgtataaagacttagtgatatgttctgatttgctattgatattctggttttagctcaaaactatgtttacactctggcattttttggttagtccacatggttgtttgtttgttctagttcttctggaaatagtaaaattttgattcactttcctgtgtatgctatgtactgatgcaaaaatgtaaagtggatcatgctcttactttgatctttcattAaagaagattggtgtttttttttctgataacattagtagttttattatactacagtgccttgtaaattacgacggtatgaattgaagatactatgtgctgcagaatggatcacatattactagagacaacaggattggctgatcctgcacctcttgtctctattctttggctagacgaccagttggagtcatcaattaaactagactctatcattacggttagttcaaccttatgttcttatttgttagtctgactgtatcttacaagttcgggaaatgtgcctgcttctttggtccttactttggataacagtttgaaggactgcattgtattggacaattttcttatatatatatttactggtcaggttattgatgcaaaaaacttcaggctgcaaattgatgagcacaaaaagtcatcatcattccctgaagcatttcatcaaattgcatttgcggtaacttggtcctcagtgttatcctatttgtaccattttgtcttcactacagaatttggaattctttgtgctgattttgtggttctgaaatttgtcttacttgatgaatcccaaaatgcaaacaaccataataacaaaagtgtcaaaactttcctggaccaggatgttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaaggcagattcatgaagtcaatgctcttgttacagtggtgcagtctgtccgctgccaggttgacttaaataaaatatttgatcagcaagcataTGGtgccaaggtcagtacctagctcgaaacttgcattttgttatttctttgtattcaatgcagaggaatctgtctttgattttgtttttggacaaaaaaaagactaactttgattagttaattgattaagtatgacatcaattagtcatgtcaacatatgggcactaaatctagtcatgccaagacatggaaactaagttattctcaggtcattaaactctatggcacttcttaacaaaagctcgaatcattcagcacgaaaaatcagtgttggtgagacgttttttcagcatctgcttgctcatgctaactagcaatacagaaatttgcttacttgcttttggtacttattttgtagttattgcttttgctggcgatggcaccttgtgctcaacaaaatctgaacaccttattcagggatttgattctgacatgtttttaatttattttccatagaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaatctccgtcatgataacagtatttctaccttgtgtatttgtgagcaggatccaatttccctgtctaaggtactcttccattagagttttttttaactgcagttaacatttagaaaacatttcccttggacaactttgaaagggtatttattcattaatcttaaaaacatagattttggttgacaactacatcattgggatttgggatatttagtttttttttctgtactcacacattgttctgttagtactttgaagtacatgctcttatgtttcacctacttttctaaaatatgtcttcacattccatactgcttaggttgctttgaaaagttacaatgaacaagtgattgcaagctctacactcacttttcctggttgacgctacagcaacaactggatacattatttgattaatattgccccttgaaatcttcatgttgagatagatgtgttatatgtcatgatttcaaagatgatcatttattgggatctgtgaaggatgctccatattctgctctactatagagaagagtagaagtctgtttaatattcaagcacatacactgcatttcctaggtttctccgttcatgaccaatgaacaccgatatacaattgtgagatatatgcatttttgtttgatttaatttgttctgaaggtggaatcatggctcgaggatcttctttgggaaaggaagttggacatggatatttatcgttgtaaagggattttacatgtccataactcggatcaagttcatacattacaggttgttgcatcatAAaaagtattctcaagaaccatacattatgagttttcaaacaaatattatcccacctgtttgctctcatgcaggcagtgagggaagtttatgaagttctgccagctcgagaatggtccaagacagaatctcgcacaaacaAGatagttgtcataggtatatttcgtaactcactagtttagagatggcaacttatgaattgtttattaattatcatatgcctgtggtgctgcaggtcgcaacttggatatcaatatccttcaagattcatttagtcgttgcaagcactgatattgaagggtttgttcatcctgtaccctgtaagttacattctgttttttggggttgtttgtgtgtgtgtatatatatacatatatatacatacatatacatacatacacacacatacacatacacatacacatacacatacacatacacacacacacacacacacacacacacacacacacacacacacacatacacatacacatacacatacacatacacatacacatacacatacacatacacatacacatacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattagtctttcagtcttgctgtttgaggttctgtcccatcaatatacttaggagtatttgctgcttgggacttgcagctgacaaaatattagcattttaatgttgttcctgcactcaacaggcacctccatgcaatcaaatactgcaaggagtttctatggctccccgaagtaatgtgctttatgtttgtctgtatatcttcaaaggtgacagtgctgacagcttcttggcaatgaagttctgcacaacggatgcaattatccgacgcgccatgttcaactttggaagaggaacatgcatccagttacaagatgatgaactacttgtggaagattttagttaagagtagtatgcaaactgatgatcggcaacatttctcgttgtatggaactgaccgaaagcaatctttttgtaagaaaccgattggcaacaataacatactgggagttgaaatctgatcctcaaattcatgtttgtaagtttgccactcttgcaaaatgcaaaacgcagctacgtgctgccaaggttcttacaaagccccatctctaacattgatctagtattagacaagagCcccCATTTGCATCGCTCAAAATTCAGGCGAACTTCACAGGAATTTGGCACAAACAATTTCGAAATTCGTACTCCGATGTTAATTCCGTGGGTTAAACCGTTTTTATCGCAGTGATACACCGTCGAACTGAATGCAACGGTCGCACAAAAATTTACATATTCACCCTCGTAACTAGTCAAAATTACGAAACACATCCTCCATTCTCCGCTCCTTCCGTTCCATTCCATCTCCGGTCTGACTGTCTGTCTGTCTGAGCCGCCGCCGCCGCCTTCTTCCCCTCTCACTCCCACCTCACTAAAACCCTAGCCCAAACCCCACCTCCTCTCCCGCCATGGCTGCCGCGGCGGCCACCTCCCGCCTCCTCCGCCGCCACCCGCCTCCCCTCCCCCTCCTCCTCCGCTCCTCCATCTCCTCCTCCCGCCCTCTTcctccagcagcccgagctctcccccgccgccgcggccgatgcggcccccgccgccgcggccgatgcggcccccgccaccgatgccgcgccgctcccgccgaagccgagcacggggagccccttctacggcgagaactggcggaaccccgccgcggcggccaacccgtcctcatcctccctcctccccgcggtcgtcggcggcggcgcgcacgcccgcgcggcggcgtactcggcgtccccgggcgcggcggagctgaaggagacgttcgcggagtggatggcggagcagcggtgggaggagatgaagcagctgttcgagttctgggtgaggtcgctcgacccggcgtccgggaagcccaaccgccccgacgtcgacctcttcaaccactacctccgcgcgcagctcatgtccggggcgctcccgatcgagatgctggatctcgccgagcagatgcgcgagttcgagatcacgcccaacacggcctcccacaacctcatcctcaagagcatggtccaggcccaggaggctgatggcgCcgagaagctcattgagcggtgagtcttttgtttttgttgtggctttgtggaatgggagatcgccattccctgattcattgttgtcataatgtgcatgtacaactcaaccatggaacctcgtaggtcgtttgcagcaaattttaaggcctgaaatatcagattttgttgcgtctttagtgacacgactagtttactagatatgcacgcctttcattcttctgatgcttagtgggtaacatagatacgatgtaacgttttgttttataaaggccatggatccattgcacttactgtttctctgatgtaacatatctcagatgctttatcaacattgcatacataatttataatatgtagttagtgcataaaactaaaagatgccttacagattgtgtataacattcaggaacttaagTTttttttcttgcagctgtaagaacgttattattgtcaatgaattgtgcagaatattgtcaaatgatatacgatagcattttcatgtattatgctctaagtgcttgcattttgtttttgtctatatgttgcctatactgtggtcactactgctacagatttcacattgaaaatgattttatctgttgaaatcaggatgttgcaaacaggaactcaaccagatgacgaatcctacaatttggttgtaaatcttctgattaaactgaaccGggtggactctactttgaaatatttggatttgatgcttaaatcaggctacacaatatcttcctctgtttttgttgagtatgtccgggcatgtgtaagatctggtagattggatacattggcatcagtcatagagaagtgcaaggtacttattattcttttagactgacaagtctgtttactgtttatatactgttagttaggactcctaatttccaatgctggaaattctcaatcgttataagtttgtgggctaccaatgggccttcaacattcttcattttcgaatatacgtttcaatcttctcggtgtatgtactaacggtgcacttattttgtttcaggctacagatcagaacaaagtcttgtgtccaccatggtcctggtgtgttgaaatagcagaagctgcttttgaagctaacaacagcaagctgggtctttttgctttggaatatcttgcaagatggattgctcgttctgagcgtgttattcctcctcttcatctttcagttgatgaaggtttagtactctcagctctaagtgctgctggcagaacttgtagcactgatctcctgaatgctgcttggtcaatattacgtaagtccttgcaccagaaaagggcaccgacgccagaggcatatcttgccaagatttatgctcattcatccattggtcatcttcagcgggcttttggtaccctacgtgaatttgaaaatacctatgggaactttgaggatattgattcagagctcttctcaccgttcaCttcattgcgaccactcgttgttgcttgctgtaaggatgggtacaccacactggactcggtatgttctctttacgctatgcataatgcatcaaggcgcaaaattcttatttggagatcatgtttaaaatcatccatgatGAgctaatgatgaaaactctgtatgtgtagttccattggtgttatgaatttatacattatgccttctgtggcactgaattattctttcttgacgtttacctagttattcacttatttctcttttcaacataaaattggtgctttctttcttcactgttgatgttttatttagttatcatttccaccagagtatttgaggcacatttttttctctcaatgacaataattcctcatggctatggtagccttttgtattttggttcctctctgcaagcataccatgtatttcttcaacattcttatttctttgtggcccagtttcatattgacagttcaaagaattattgacacagtcctttttcagtgctattaggaattcgtcatagcattgtccctgccaatttgtcttgacattatgggaggaatgttttattgcctgttatgcatttctttcaccaaatatgatggaatatcctaacactgtaggctcctgcctgcaggtctatgtgcaattggagaatttaagttctgcagattcgccatacaaatctgttgctgctcttaactgtgttatattggggtgtgcaaacatttgggatcttgagcgagcatatgaaacttttgaggcaataaaagaaaagtttggacttacacctgacatacattcttacaatgcgcttttgcatgcatttggaaagcggaaaaaggtattattattacctaatggatttgatactttcacaacatttatcacctttttgccacttaccaacaatccattcagcctatgatgcccatgtgtattatacagactgaagaagcttgcaacgtctttcagcatctagtaagccttggtgttaagccaaatgcaacaacttatggccttcttgttgacactcatcttgtaaatcgggacgcaaaagctgctcttgctgtaattgctgagatggtatggtcaatttacttttgcacatttcctgtctatctatagtttctcaatgtaatgtctggttcaggttgatgcgggctttactccttcaaaggagacacttaagaaggtccaaagacgctgctcccgtgaatcagattttgatagtgacgagaaagtgcaatccctggctaagcagtttaactaccgaatgggtggtgaaaaccgcagggagatgctctttaacattgaatacagcgctgagttcgcaagtactcctagtccaaggtactgggctaaccttttctgaatccaacattttctttatttttcatcgcataccagcaatggctcTTtttttttttgctttatctaatgcatttgctgactgatttgcttgatggttttgttttgcaagttgattttgatgatgccggtgcgctccagtagacgtaacgtgtaccctcgctcactttgctggtacttgaagggcacggaagctgtagtctgtAaattatacttctttgtaccaacttccctaattatttcaagcatctcaagctatcatttttgttggcagaaccctcaacaggatttatgttaggatttcagaataagggtcctaatagattttttttttcctgctcaaagcaccatgttttacaatcaatggatgtttgctcaacttatctctcagttccagccttttttacggctctcgtgttatttattcctataccgcatgccatgtcaattatgt
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| CDS seq | ATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGttagtcaactacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatgagtttggagaggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgcttgttgaagagtgggtagagctggcaaatggatgtgtttgttgcacggtgaaacacagcctggttcaagcacttgagcagcttgtgcagagaaaggagagaatggatcacatattactagagacaacaggattggctgatcctgcacctcttgtctctattctttggctagacgaccagttggagtcatcaattaaactagactctatcattacggttattgatgcaaaaaacttcaggctgcaaattgatgagcacaaaaagtcatcatcattccctgaagcatttcatcaaattgcatttgcggtaacttggtcctcagtgttatcctatttgtaccattttgtcttcactacagaatttggaattctttgtgctgattttgtggttctgaaatttgtcttacttgatgaatcccaaaatgcaaacaaccataataacaaaagtgtcaaaactttcctggaccaggatgttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaaggcagattcatgaagtcaatgctcttgttacagtggtgcagtctgtccgctgccaggttgacttaaataaaatatttgatcagcaagcataTGGtgccaagaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaatctccgtcatgataacagtatttctaccttgtgtatttgtgagcaggatccaatttccctgtctaaggtggaatcatggctcgaggatcttctttgggaaaggaagttggacatggatatttatcgttgtaaagggattttacatgtccataactcggatcaagttcatacattacaggcagtgagggaagtttatgaagttctgccagctcgagaatggtccaagacagaatctcgcacaaacaAGatagttgtcataggtgacagtgctgacagcttcttggcaatgaagttctgcacaacggatgcaattatccgacgcgccatgttcaactttggaagaggaacatgcatccagttacaagatgatgaactacttgtggaagattttaCCGCCGCCGCCGCCTTCTTCCCCTCTCACTCCCACCTCACTAAAACCCTAGCCCAAACCCCACCTCCTCTCCCGCCATGGCTGCCGCGGCGGCCACCTCCCGCCTCCTCCGCCGCCACCCGCCTCCCCTCCCCCTCCTCCTCCGCTCCTCCATCTCCTCCTCCCGCCCTCTTcctccagcagcccgagctctcccccgccgccgcggccgatgcggcccccgccgccgcggccgatgcggcccccgccaccgatgccgcgccgctcccgccgaagccgagcacggggagccccttctacggcgagaactggcggaaccccgccgcggcggccaacccgtcctcatcctccctcctccccgcggtcgtcggcggcggcgcgcacgcccgcgcggcggcgtactcggcgtccccgggcgcggcggagctgaaggagacgttcgcggagtggatggcggagcagcggtgggaggagatgaagcagctgttcgagttctgggtgaggtcgctcgacccggcgtccgggaagcccaaccgccccgacgtcgacctcttcaaccactacctccgcgcgcagctcatgtccggggcgctcccgatcgagatgctggatctcgccgagcagatgcgcgagttcgagatcacgcccaacacggcctcccacaacctcatcctcaagagcatggtccaggcccaggaggctgatggcgCcgagaagctcattgagcggatgttgcaaacaggaactcaaccagatgacgaatcctacaatttggttgtaaatcttctgattaaactgaaccGggtggactctactttgaaatatttggatttgatgcttaaatcaggctacacaatatcttcctctgtttttgttgagtatgtccgggcatgtgtaagatctggtagattggatacattggcatcagtcatagagaagtgcaaggctacagatcagaacaaagtcttgtgtccaccatggtcctggtgtgttgaaatagcagaagctgcttttgaagctaacaacagcaagctgggtctttttgctttggaatatcttgcaagatggattgctcgttctgagcgtgttattcctcctcttcatctttcagttgatgaaggtttagtactctcagctctaagtgctgctggcagaacttgtagcactgatctcctgaatgctgcttggtcaatattacgtaagtccttgcaccagaaaagggcaccgacgccagaggcatatcttgccaagatttatgctcattcatccattggtcatcttcagcgggcttttggtaccctacgtgaatttgaaaatacctatgggaactttgaggatattgattcagagctcttctcaccgttcaCttcattgcgaccactcgttgttgcttgctgtaaggatgggtacaccacactggactcggtctatgtgcaattggagaatttaagttctgcagattcgccatacaaatctgttgctgctcttaactgtgttatattggggtgtgcaaacatttgggatcttgagcgagcatatgaaacttttgaggcaataaaagaaaagtttggacttacacctgacatacattcttacaatgcgcttttgcatgcatttggaaagcggaaaaagactgaagaagcttgcaacgtctttcagcatctagtaagccttggtgttaagccaaatgcaacaacttatggccttcttgttgacactcatcttgtaaatcgggacgcaaaagctgctcttgctgtaattgctgagatggttgatgcgggctttactccttcaaaggagacacttaagaaggtccaaagacgctgctcccgtgaatcagattttgatagtgacgagaaagtgcaatccctggctaagcagtttaactaccgaatgggtggtgaaaaccgcagggagatgctctttaacattgaatacagcgctgagttcgcaattgattttgatgatgccggtgcgctccagtag
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| Protein seq | MEDDDECPPLAVELSPEKPYSPPPLGPSAASPVGVTVITGYLGAGKSTLVNYILSAQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQRKERMDHILLETTGLADPAPLVSILWLDDQLESSIKLDSIITVIDAKNFRLQIDEHKKSSSFPEAFHQIAFAVTWSSVLSYLYHFVFTTEFGILCADFVVLKFVLLDESQNANNHNNKSVKTFLDQDVVILNKIDLVEGSLEDLERQIHEVNALVTVVQSVRCQVDLNKIFDQQAYGAKNSSQLQELLEYSKSVPPNLRHDNSISTLCICEQDPISLSKVESWLEDLLWERKLDMDIYRCKGILHVHNSDQVHTLQAVREVYEVLPAREWSKTESRTNKIVVIGDSADSFLAMKFCTTDAIIRRAMFNFGRGTCIQLQDDELLVEDFTAAAAFFPSHSHLTKTLAQTPPPLPPWLPRRPPPASSAATRLPSPSSSAPPSPPPALFLQQPELSPAAAADAAPAAAADAAPATDAAPLPPKPSTGSPFYGENWRNPAAAANPSSSSLLPAVVGGGAHARAAAYSASPGAAELKETFAEWMAEQRWEEMKQLFEFWVRSLDPASGKPNRPDVDLFNHYLRAQLMSGALPIEMLDLAEQMREFEITPNTASHNLILKSMVQAQEADGAEKLIERMLQTGTQPDDESYNLVVNLLIKLNRVDSTLKYLDLMLKSGYTISSSVFVEYVRACVRSGRLDTLASVIEKCKATDQNKVLCPPWSWCVEIAEAAFEANNSKLGLFALEYLARWIARSERVIPPLHLSVDEGLVLSALSAAGRTCSTDLLNAAWSILRKSLHQKRAPTPEAYLAKIYAHSSIGHLQRAFGTLREFENTYGNFEDIDSELFSPFTSLRPLVVACCKDGYTTLDSVYVQLENLSSADSPYKSVAALNCVILGCANIWDLERAYETFEAIKEKFGLTPDIHSYNALLHAFGKRKKTEEACNVFQHLVSLGVKPNATTYGLLVDTHLVNRDAKAALAVIAEMVDAGFTPSKETLKKVQRRCSRESDFDSDEKVQSLAKQFNYRMGGENRREMLFNIEYSAEFAIDFDDAGALQ |
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| Function | Pentatricopeptide repeat-containing protein At1g26460, mitochondrial [UniProtKB/Swiss-Prot:Q9FZD1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0021830 | OsGoSa_07g0021830.02 | Chr07 | 25189206 | 25198235 | + | NAM | ||
| CDS seq | ATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGttagtcaactacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatgagtttggagaggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgcttgttgaagagtgggtagagctggcaaatggatgtgtttgttgcacggtgaaacacagcctggttcaagcacttgagcagcttgtgcagagaaaggagagaatggatcacatattactagagacaacaggattggctgatcctgcacctcttgtctctattctttggctagacgaccagttggagtcatcaattaaactagactctatcattacggttattgatgcaaaaaacttcaggctgcaaattgatgagcacaaaaagtcatcatcattccctgaagcatttcatcaaattgcatttgcggtaacttggtcctcagtgttatcctatttgtaccattttgtcttcactacagaatttggaattctttgtgctgattttgtggttctgaaatttgtcttacttgatgaatcccaaaatgcaaacaaccataataacaaaagtgtcaaaactttcctggaccaggatgttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaaggcagattcatgaagtcaatgctcttgttacagtggtgcagtctgtccgctgccaggttgacttaaataaaatatttgatcagcaagcataTGGtgccaagaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaatctccgtcatgataacagtatttctaccttgtgtatttgtgagcaggatccaatttccctgtctaaggtggaatcatggctcgaggatcttctttgggaaaggaagttggacatggatatttatcgttgtaaagggattttacatgtccataactcggatcaagttcatacattacaggcagtgagggaagtttatgaagttctgccagctcgagaatggtccaagacagaatctcgcacaaacaAGatagttgtcataggtgacagtgctgacagcttcttggcaatgaagttctgcacaacggatgcaattatccgacgcgccatgttcaactttggaagaggaacatgcatccagttacaagatgatgaactacttgtggaagattttaCCGCCGCCGCCGCCTTCTTCCCCTCTCACTCCCACCTCACTAAAACCCTAGCCCAAACCCCACCTCCTCTCCCGCCATGGCTGCCGCGGCGGCCACCTCCCGCCTCCTCCGCCGCCACCCGCCTCCCCTCCCCCTCCTCCTCCGCTCCTCCATCTCCTCCTCCCGCCCTCTTcctccagcagcccgagctctcccccgccgccgcggccgatgcggcccccgccgccgcggccgatgcggcccccgccaccgatgccgcgccgctcccgccgaagccgagcacggggagccccttctacggcgagaactggcggaaccccgccgcggcggccaacccgtcctcatcctccctcctccccgcggtcgtcggcggcggcgcgcacgcccgcgcggcggcgtactcggcgtccccgggcgcggcggagctgaaggagacgttcgcggagtggatggcggagcagcggtgggaggagatgaagcagctgttcgagttctgggtgaggtcgctcgacccggcgtccgggaagcccaaccgccccgacgtcgacctcttcaaccactacctccgcgcgcagctcatgtccggggcgctcccgatcgagatgctggatctcgccgagcagatgcgcgagttcgagatcacgcccaacacggcctcccacaacctcatcctcaagagcatggtccaggcccaggaggctgatggcgCcgagaagctcattgagcggatgttgcaaacaggaactcaaccagatgacgaatcctacaatttggttgtaaatcttctgattaaactgaaccGggtggactctactttgaaatatttggatttgatgcttaaatcaggctacacaatatcttcctctgtttttgttgagtatgtccgggcatgtgtaagatctggtagattggatacattggcatcagtcatagagaagtgcaaggctacagatcagaacaaagtcttgtgtccaccatggtcctggtgtgttgaaatagcagaagctgcttttgaagctaacaacagcaagctgggtctttttgctttggaatatcttgcaagatggattgctcgttctgagcgtgttattcctcctcttcatctttcagttgatgaaggtttagtactctcagctctaagtgctgctggcagaacttgtagcactgatctcctgaatgctgcttggtcaatattacgtaagtccttgcaccagaaaagggcaccgacgccagaggcatatcttgccaagatttatgctcattcatccattggtcatcttcagcgggcttttggtaccctacgtgaatttgaaaatacctatgggaactttgaggatattgattcagagctcttctcaccgttcaCttcattgcgaccactcgttgttgcttgctgtaaggatgggtacaccacactggactcggtctatgtgcaattggagaatttaagttctgcagattcgccatacaaatctgttgctgctcttaactgtgttatattggggtgtgcaaacatttgggatcttgagcgagcatatgaaacttttgaggcaataaaagaaaagtttggacttacacctgacatacattcttacaatgcgcttttgcatgcatttggaaagcggaaaaagactgaagaagcttgcaacgtctttcagcatctagtaagccttggtgttaagccaaatgcaacaacttatggccttcttgttgacactcatcttgtaaatcgggacgcaaaagctgctcttgctgtaattgctgagatggttgatgcgggctttactccttcaaaggagacacttaagaaggtccaaagacgctgctcccgtgaatcagattttgatagtgacgagaaagtgcaatccctggctaagcagtttaactaccgaatgggtggtgaaaaccgcagggagatgctctttaacattgaatacagcgctgagttcgcaattgattttgatgatgccggtgcgctccagtag
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| Protein seq | MEDDDECPPLAVELSPEKPYSPPPLGPSAASPVGVTVITGYLGAGKSTLVNYILSAQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQRKERMDHILLETTGLADPAPLVSILWLDDQLESSIKLDSIITVIDAKNFRLQIDEHKKSSSFPEAFHQIAFAVTWSSVLSYLYHFVFTTEFGILCADFVVLKFVLLDESQNANNHNNKSVKTFLDQDVVILNKIDLVEGSLEDLERQIHEVNALVTVVQSVRCQVDLNKIFDQQAYGAKNSSQLQELLEYSKSVPPNLRHDNSISTLCICEQDPISLSKVESWLEDLLWERKLDMDIYRCKGILHVHNSDQVHTLQAVREVYEVLPAREWSKTESRTNKIVVIGDSADSFLAMKFCTTDAIIRRAMFNFGRGTCIQLQDDELLVEDFTAAAAFFPSHSHLTKTLAQTPPPLPPWLPRRPPPASSAATRLPSPSSSAPPSPPPALFLQQPELSPAAAADAAPAAAADAAPATDAAPLPPKPSTGSPFYGENWRNPAAAANPSSSSLLPAVVGGGAHARAAAYSASPGAAELKETFAEWMAEQRWEEMKQLFEFWVRSLDPASGKPNRPDVDLFNHYLRAQLMSGALPIEMLDLAEQMREFEITPNTASHNLILKSMVQAQEADGAEKLIERMLQTGTQPDDESYNLVVNLLIKLNRVDSTLKYLDLMLKSGYTISSSVFVEYVRACVRSGRLDTLASVIEKCKATDQNKVLCPPWSWCVEIAEAAFEANNSKLGLFALEYLARWIARSERVIPPLHLSVDEGLVLSALSAAGRTCSTDLLNAAWSILRKSLHQKRAPTPEAYLAKIYAHSSIGHLQRAFGTLREFENTYGNFEDIDSELFSPFTSLRPLVVACCKDGYTTLDSVYVQLENLSSADSPYKSVAALNCVILGCANIWDLERAYETFEAIKEKFGLTPDIHSYNALLHAFGKRKKTEEACNVFQHLVSLGVKPNATTYGLLVDTHLVNRDAKAALAVIAEMVDAGFTPSKETLKKVQRRCSRESDFDSDEKVQSLAKQFNYRMGGENRREMLFNIEYSAEFAIDFDDAGALQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0021830 | OsGoSa_07g0021830.01 | Chr07 | 25189206 | 25198235 | + | NAM | ||
| CDS seq | ATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGttagtcaactacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatgagtttggagaggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgcttgttgaagagtgggtagagctggcaaatggatgtgtttgttgcacggtgaaacacagcctggttcaagcacttgagcagcttgtgcagagaaaggagagaatggatcacatattactagagacaacaggattggctgatcctgcacctcttgtctctattctttggctagacgaccagttggagtcatcaattaaactagactctatcattacggttattgatgcaaaaaacttcaggctgcaaattgatgagcacaaaaagtcatcatcattccctgaagcatttcatcaaattgcatttgcggatgttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaaggcagattcatgaagtcaatgctcttgttacagtggtgcagtctgtccgctgccaggttgacttaaataaaatatttgatcagcaagcataTGGtgccaagaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaatctccgtcatgataacagtatttctaccttgtgtatttgtgagcaggatccaatttccctgtctaaggtggaatcatggctcgaggatcttctttgggaaaggaagttggacatggatatttatcgttgtaaagggattttacatgtccataactcggatcaagttcatacattacaggcagtgagggaagtttatgaagttctgccagctcgagaatggtccaagacagaatctcgcacaaacaAGatagttgtcataggtgacagtgctgacagcttcttggcaatgaagttctgcacaacggatgcaattatccgacgcgccatgttcaactttggaagaggaacatgcatccagttacaagatgatgaactacttgtggaagattttaCCGCCGCCGCCGCCTTCTTCCCCTCTCACTCCCACCTCACTAAAACCCTAGCCCAAACCCCACCTCCTCTCCCGCCATGGCTGCCGCGGCGGCCACCTCCCGCCTCCTCCGCCGCCACCCGCCTCCCCTCCCCCTCCTCCTCCGCTCCTCCATCTCCTCCTCCCGCCCTCTTcctccagcagcccgagctctcccccgccgccgcggccgatgcggcccccgccgccgcggccgatgcggcccccgccaccgatgccgcgccgctcccgccgaagccgagcacggggagccccttctacggcgagaactggcggaaccccgccgcggcggccaacccgtcctcatcctccctcctccccgcggtcgtcggcggcggcgcgcacgcccgcgcggcggcgtactcggcgtccccgggcgcggcggagctgaaggagacgttcgcggagtggatggcggagcagcggtgggaggagatgaagcagctgttcgagttctgggtgaggtcgctcgacccggcgtccgggaagcccaaccgccccgacgtcgacctcttcaaccactacctccgcgcgcagctcatgtccggggcgctcccgatcgagatgctggatctcgccgagcagatgcgcgagttcgagatcacgcccaacacggcctcccacaacctcatcctcaagagcatggtccaggcccaggaggctgatggcgCcgagaagctcattgagcggatgttgcaaacaggaactcaaccagatgacgaatcctacaatttggttgtaaatcttctgattaaactgaaccGggtggactctactttgaaatatttggatttgatgcttaaatcaggctacacaatatcttcctctgtttttgttgagtatgtccgggcatgtgtaagatctggtagattggatacattggcatcagtcatagagaagtgcaaggctacagatcagaacaaagtcttgtgtccaccatggtcctggtgtgttgaaatagcagaagctgcttttgaagctaacaacagcaagctgggtctttttgctttggaatatcttgcaagatggattgctcgttctgagcgtgttattcctcctcttcatctttcagttgatgaaggtttagtactctcagctctaagtgctgctggcagaacttgtagcactgatctcctgaatgctgcttggtcaatattacgtaagtccttgcaccagaaaagggcaccgacgccagaggcatatcttgccaagatttatgctcattcatccattggtcatcttcagcgggcttttggtaccctacgtgaatttgaaaatacctatgggaactttgaggatattgattcagagctcttctcaccgttcaCttcattgcgaccactcgttgttgcttgctgtaaggatgggtacaccacactggactcggtctatgtgcaattggagaatttaagttctgcagattcgccatacaaatctgttgctgctcttaactgtgttatattggggtgtgcaaacatttgggatcttgagcgagcatatgaaacttttgaggcaataaaagaaaagtttggacttacacctgacatacattcttacaatgcgcttttgcatgcatttggaaagcggaaaaagactgaagaagcttgcaacgtctttcagcatctagtaagccttggtgttaagccaaatgcaacaacttatggccttcttgttgacactcatcttgtaaatcgggacgcaaaagctgctcttgctgtaattgctgagatggttgatgcgggctttactccttcaaaggagacacttaagaaggtccaaagacgctgctcccgtgaatcagattttgatagtgacgagaaagtgcaatccctggctaagcagtttaactaccgaatgggtggtgaaaaccgcagggagatgctctttaacattgaatacagcgctgagttcgcaattgattttgatgatgccggtgcgctccagtag
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| Protein seq | MEDDDECPPLAVELSPEKPYSPPPLGPSAASPVGVTVITGYLGAGKSTLVNYILSAQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQRKERMDHILLETTGLADPAPLVSILWLDDQLESSIKLDSIITVIDAKNFRLQIDEHKKSSSFPEAFHQIAFADVVILNKIDLVEGSLEDLERQIHEVNALVTVVQSVRCQVDLNKIFDQQAYGAKNSSQLQELLEYSKSVPPNLRHDNSISTLCICEQDPISLSKVESWLEDLLWERKLDMDIYRCKGILHVHNSDQVHTLQAVREVYEVLPAREWSKTESRTNKIVVIGDSADSFLAMKFCTTDAIIRRAMFNFGRGTCIQLQDDELLVEDFTAAAAFFPSHSHLTKTLAQTPPPLPPWLPRRPPPASSAATRLPSPSSSAPPSPPPALFLQQPELSPAAAADAAPAAAADAAPATDAAPLPPKPSTGSPFYGENWRNPAAAANPSSSSLLPAVVGGGAHARAAAYSASPGAAELKETFAEWMAEQRWEEMKQLFEFWVRSLDPASGKPNRPDVDLFNHYLRAQLMSGALPIEMLDLAEQMREFEITPNTASHNLILKSMVQAQEADGAEKLIERMLQTGTQPDDESYNLVVNLLIKLNRVDSTLKYLDLMLKSGYTISSSVFVEYVRACVRSGRLDTLASVIEKCKATDQNKVLCPPWSWCVEIAEAAFEANNSKLGLFALEYLARWIARSERVIPPLHLSVDEGLVLSALSAAGRTCSTDLLNAAWSILRKSLHQKRAPTPEAYLAKIYAHSSIGHLQRAFGTLREFENTYGNFEDIDSELFSPFTSLRPLVVACCKDGYTTLDSVYVQLENLSSADSPYKSVAALNCVILGCANIWDLERAYETFEAIKEKFGLTPDIHSYNALLHAFGKRKKTEEACNVFQHLVSLGVKPNATTYGLLVDTHLVNRDAKAALAVIAEMVDAGFTPSKETLKKVQRRCSRESDFDSDEKVQSLAKQFNYRMGGENRREMLFNIEYSAEFAIDFDDAGALQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0021830 | OsGoSa_07g0021830.03 | Chr07 | 25189204 | 25193899 | + | IsoSeq | ||
| CDS seq | GTAGTTCTCGAGGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGTCGGCGGCGGCGGCCATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGttagtcaactacattctaagtgcgcaacatggaaagagaattgcagtgatatt
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| Protein seq | VVLEASVSSSLVVVVGGGGHGGRRRVPSPRRRALAGEAVQSSAARSLRGVAGRSHRHHWLPRRRQVHVSQLHSKCATWKENCSDI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr07 | 25191104 | 25191514 | + | OsGoSa_07g0021830.02 | OsGoSa_07g0021830.03,OsGoSa_07g0021830.01,OsGoSa_07g0021830.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.032442 | 8.479010 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0598900 | RBH | 2.056457 | 0.491727 | 4.516335 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g40790 | RBH | 1.778660 | 0.406531 | 1.442919 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0598900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0022140 | RBH | 0.658347 | 7.473482 | 3.533493 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0022160 | RBH | 0.157567 | 2.592850 | 0.423412 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0022030 | RBH | 0.543355 | 4.964059 | 7.393716 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0021940 | RBH | 0.046576 | 0.019854 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0022020 | RBH | 6.803444 | 9.105791 | 6.639563 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0400500 | RBH | 5.379746 | 12.615237 | 8.5320135 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0022470 | RBH | 0.000000 | 0.258652 | 0.896672 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0413800 | RBH | 4.035533 | 7.681387 | 11.5975075 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0021740 | RBH | 0.363446 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0021920 | RBH | 0.199448 | 10.798990 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0021860 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0022040 | RBH | 0.056900 | 0.290843 | 0.469426 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0021800 | RBH | 0.0 | 1.819772 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G021680 | RBH | 0.247356 | 0.438529 | 1.785876 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0021760 | RBH | 0.576393 | 11.089879 | 4.419368 |
