Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_07g0017940 | OGI:07059860 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr07:21923407-21926587 | ||||||||
| Gene Symbol | CRK6 | ||||||||||
| DNA seq | gcctcgtatcgtgacaacttaccattaccatcgccagcacaatgcgccgccaccgttcctacctcgccggcgtcgccgccgccgccgccgccgccgcaaccgcaaccttcctcgtcgccgtcctcctccacgcgccgctcgccgccggcgacgacgagcctccgccatgggtcctgtgcgcgccctaccctcccagcggcaactactcgaggaacggcacgtaccaggccaacctcgacctcctctccaccaccctccccaagaacacctcctcgtctccggccatgtacgccacgggcaccgtcggcgacgtccccgacaaggtgtacggcctcgcgctgtgccgcggcgacgccaacgcctccgcctgcgagcgctgcgtcgcggccgccctccgcgacgcgccgcggaggtgcccgctcgtcaaggacgtgctcgtcttctacgacctctgccagctccgctactccaaccgcgacttcttcctcgacgatgactacttcgtcaccacctacaccctccagcgctcccgccgcgtgggcgccgcggcggcggcagcgttcgacgcggccgtcgcagtgctcgtcaacgccaccgcggactacgcggcggcggactcgtcgaggcggtacggcacgggggaggaggagggcgtcgacggcgacagcgaccgccccaagatctacgcgctggcgcagtgcacgccggacaagacgcccgaagtctgccggacctgcctctcgacggtgatcgggcaactgcccaaagaattcagcgggaggacgggagggggcatgttcggggtgtggtgcaacttccggtacgaggtgttccctttcttctccggccgcccgctgctgcagcttccggcgttcgtggagacgccgccgccgccgccttcgccatcggcgaccagtggaggtgagcaacacaaaccacttttctcttttgggtgtgaaaggcacacagattaattaattgcagataatcttgcaaaaaaaccaactatgactctttcgtggaaattccacggcaaaatatacagtctctaagtgcagttcacactttctgaaattctgaatcggattgtatttatttgcagagaaaacgaaaaataggattggtgcggttttagcaatagttatgcctgcaatagctgcagtactgctcatggttgtagcatgcgtttgttgctggaagaggatcaagaagagacgaccagaagaacagacgtttctgtcctgtaagtgtgctaaaaatcatgatatgttagcacatcaataaatggataagtttgttgaccggcagggaattggtggttgaattgaaaatagtttgcttttatttattttcattatcttgaatcttaatgccaagctgtgtccccagcttgtagtgaaatcatatttcccTttttttgtttcctgaatgaatgaaatcagacttgttgataagcttaatcttgtttatcatctttgtcccaacagattcagttagttcagatgatattcagagcattgattcgcttatacttgatctaccaacaatacgagttgctacagatgattttgctgatactaaaatgattggccaaggaggattcggtatggtttacaaggtagaaaaatcataccacatgtacctttatcagttataTttttgtcggttatatagtaagtatctttacttggatagggagtcctacctgatggccaagaaatagccgtgaagaggctttgccagagttccagacaaggaataggagagctgaaaagtgagctgattttggttgctaagctttaccacaagaatctagtaaggcttattggtgtttgcttggaacagcaagagaaaatacttgtctatgaatatatgccaaatagaagccttgatatcattcttttcggtacggttttctcactagtagtttttccaaaagaaagaaagaacaattatactagtgccaaatgccgccagagttattagttacattacaatgctatggtttttctttgtttgagcctcagataccgacaagaacaggaacctagattgggggaaaagattcaagattataaatgggattgctcgaggcttgcaataccttcatgaagattctcaattgaagatagtgcaccgggacctcaaagcaagcaacatcctattagactttgattacagccctaagatttctgattttggcttagcaaagatatttggaggggatcaatcagaagatgtcactaatcgaatcgccggaacattgtaagcatgatcatggtcaacatttatcaaaattaaggtaacaaatataatactaggttgtaatgtaatgttctttgtcgcagtggatacatggcaccagaatacgctatgcgtggtaattattcaatcaaatcggatgtattcagcttcggcgttttggtattagagattatcaccggaagaagaaacactggctcatatgatagtgggcaagatgttgatctcttaaacctagtgagtacttcaagtttgttcatgaataattaaccaaacttctcaacatatatattacttgaataaatcaaccaatttggtgcaggtgtgggagcactggacaaggggaaacgttgtagagctgattgatccatccatgggcgaccatcctccaatcgagcagatgttgaagtgcatccacatcgggttgttgtgtgttcagaaaaaacctgcaagcaggccgacgatttcgtcagtaaacatcatgcttagcagcaacactgttcgtctcccttctctatccaggccggccttctgcatccaggaggttagtgccagtgacagctctaatccgtattcagaacgctatgcaagaccaagacattccgggtattctgataattcaacagtggtgtcttcgaatgatttgtcaatcacagagcttgtgccgagatgaatcctgaattcttagttcagtcgtgtacagtgcttctagatattaggttgatgcttggggatgccctactgcatcacgtcagtatattattattcattgaatccagcattgtctgtaattagaattaataagatggtattgcttagaaattgaaactgaccggagtggataataaaaatcaggagtgatcacgatgtatggcatgatgaattgtcactgttgtcaattatgctgttattagaccta
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| CDS seq | atgcgccgccaccgttcctacctcgccggcgtcgccgccgccgccgccgccgccgcaaccgcaaccttcctcgtcgccgtcctcctccacgcgccgctcgccgccggcgacgacgagcctccgccatgggtcctgtgcgcgccctaccctcccagcggcaactactcgaggaacggcacgtaccaggccaacctcgacctcctctccaccaccctccccaagaacacctcctcgtctccggccatgtacgccacgggcaccgtcggcgacgtccccgacaaggtgtacggcctcgcgctgtgccgcggcgacgccaacgcctccgcctgcgagcgctgcgtcgcggccgccctccgcgacgcgccgcggaggtgcccgctcgtcaaggacgtgctcgtcttctacgacctctgccagctccgctactccaaccgcgacttcttcctcgacgatgactacttcgtcaccacctacaccctccagcgctcccgccgcgtgggcgccgcggcggcggcagcgttcgacgcggccgtcgcagtgctcgtcaacgccaccgcggactacgcggcggcggactcgtcgaggcggtacggcacgggggaggaggagggcgtcgacggcgacagcgaccgccccaagatctacgcgctggcgcagtgcacgccggacaagacgcccgaagtctgccggacctgcctctcgacggtgatcgggcaactgcccaaagaattcagcgggaggacgggagggggcatgttcggggtgtggtgcaacttccggtacgaggtgttccctttcttctccggccgcccgctgctgcagcttccggcgttcgtggagacgccgccgccgccgccttcgccatcggcgaccagtggagagaaaacgaaaaataggattggtgcggttttagcaatagttatgcctgcaatagctgcagtactgctcatggttgtagcatgcgtttgttgctggaagaggatcaagaagagacgaccagaagaacagacgtttctgtcctattcagttagttcagatgatattcagagcattgattcgcttatacttgatctaccaacaatacgagttgctacagatgattttgctgatactaaaatgattggccaaggaggattcggtatggtttacaagggagtcctacctgatggccaagaaatagccgtgaagaggctttgccagagttccagacaaggaataggagagctgaaaagtgagctgattttggttgctaagctttaccacaagaatctagtaaggcttattggtgtttgcttggaacagcaagagaaaatacttgtctatgaatatatgccaaatagaagccttgatatcattcttttcgataccgacaagaacaggaacctagattgggggaaaagattcaagattataaatgggattgctcgaggcttgcaataccttcatgaagattctcaattgaagatagtgcaccgggacctcaaagcaagcaacatcctattagactttgattacagccctaagatttctgattttggcttagcaaagatatttggaggggatcaatcagaagatgtcactaatcgaatcgccggaacatttggatacatggcaccagaatacgctatgcgtggtaattattcaatcaaatcggatgtattcagcttcggcgttttggtattagagattatcaccggaagaagaaacactggctcatatgatagtgggcaagatgttgatctcttaaacctagtgtgggagcactggacaaggggaaacgttgtagagctgattgatccatccatgggcgaccatcctccaatcgagcagatgttgaagtgcatccacatcgggttgttgtgtgttcagaaaaaacctgcaagcaggccgacgatttcgtcagtaaacatcatgcttagcagcaacactgttcgtctcccttctctatccaggccggccttctgcatccaggaggttagtgccagtgacagctctaatccgtattcagaacgctatgcaagaccaagacattccgggtattctgataattcaacagtggtgtcttcgaatgatttgtcaatcacagagcttgtgccgagatga
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| Protein seq | MRRHRSYLAGVAAAAAAAATATFLVAVLLHAPLAAGDDEPPPWVLCAPYPPSGNYSRNGTYQANLDLLSTTLPKNTSSSPAMYATGTVGDVPDKVYGLALCRGDANASACERCVAAALRDAPRRCPLVKDVLVFYDLCQLRYSNRDFFLDDDYFVTTYTLQRSRRVGAAAAAAFDAAVAVLVNATADYAAADSSRRYGTGEEEGVDGDSDRPKIYALAQCTPDKTPEVCRTCLSTVIGQLPKEFSGRTGGGMFGVWCNFRYEVFPFFSGRPLLQLPAFVETPPPPPSPSATSGEKTKNRIGAVLAIVMPAIAAVLLMVVACVCCWKRIKKRRPEEQTFLSYSVSSDDIQSIDSLILDLPTIRVATDDFADTKMIGQGGFGMVYKGVLPDGQEIAVKRLCQSSRQGIGELKSELILVAKLYHKNLVRLIGVCLEQQEKILVYEYMPNRSLDIILFDTDKNRNLDWGKRFKIINGIARGLQYLHEDSQLKIVHRDLKASNILLDFDYSPKISDFGLAKIFGGDQSEDVTNRIAGTFGYMAPEYAMRGNYSIKSDVFSFGVLVLEIITGRRNTGSYDSGQDVDLLNLVWEHWTRGNVVELIDPSMGDHPPIEQMLKCIHIGLLCVQKKPASRPTISSVNIMLSSNTVRLPSLSRPAFCIQEVSASDSSNPYSERYARPRHSGYSDNSTVVSSNDLSITELVPR |
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| Function | Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0017940 | OsGoSa_07g0017940.01 | Chr07 | 21923407 | 21926587 | + | NAM | ||
| CDS seq | atgcgccgccaccgttcctacctcgccggcgtcgccgccgccgccgccgccgccgcaaccgcaaccttcctcgtcgccgtcctcctccacgcgccgctcgccgccggcgacgacgagcctccgccatgggtcctgtgcgcgccctaccctcccagcggcaactactcgaggaacggcacgtaccaggccaacctcgacctcctctccaccaccctccccaagaacacctcctcgtctccggccatgtacgccacgggcaccgtcggcgacgtccccgacaaggtgtacggcctcgcgctgtgccgcggcgacgccaacgcctccgcctgcgagcgctgcgtcgcggccgccctccgcgacgcgccgcggaggtgcccgctcgtcaaggacgtgctcgtcttctacgacctctgccagctccgctactccaaccgcgacttcttcctcgacgatgactacttcgtcaccacctacaccctccagcgctcccgccgcgtgggcgccgcggcggcggcagcgttcgacgcggccgtcgcagtgctcgtcaacgccaccgcggactacgcggcggcggactcgtcgaggcggtacggcacgggggaggaggagggcgtcgacggcgacagcgaccgccccaagatctacgcgctggcgcagtgcacgccggacaagacgcccgaagtctgccggacctgcctctcgacggtgatcgggcaactgcccaaagaattcagcgggaggacgggagggggcatgttcggggtgtggtgcaacttccggtacgaggtgttccctttcttctccggccgcccgctgctgcagcttccggcgttcgtggagacgccgccgccgccgccttcgccatcggcgaccagtggagagaaaacgaaaaataggattggtgcggttttagcaatagttatgcctgcaatagctgcagtactgctcatggttgtagcatgcgtttgttgctggaagaggatcaagaagagacgaccagaagaacagacgtttctgtcctattcagttagttcagatgatattcagagcattgattcgcttatacttgatctaccaacaatacgagttgctacagatgattttgctgatactaaaatgattggccaaggaggattcggtatggtttacaagggagtcctacctgatggccaagaaatagccgtgaagaggctttgccagagttccagacaaggaataggagagctgaaaagtgagctgattttggttgctaagctttaccacaagaatctagtaaggcttattggtgtttgcttggaacagcaagagaaaatacttgtctatgaatatatgccaaatagaagccttgatatcattcttttcgataccgacaagaacaggaacctagattgggggaaaagattcaagattataaatgggattgctcgaggcttgcaataccttcatgaagattctcaattgaagatagtgcaccgggacctcaaagcaagcaacatcctattagactttgattacagccctaagatttctgattttggcttagcaaagatatttggaggggatcaatcagaagatgtcactaatcgaatcgccggaacatttggatacatggcaccagaatacgctatgcgtggtaattattcaatcaaatcggatgtattcagcttcggcgttttggtattagagattatcaccggaagaagaaacactggctcatatgatagtgggcaagatgttgatctcttaaacctagtgtgggagcactggacaaggggaaacgttgtagagctgattgatccatccatgggcgaccatcctccaatcgagcagatgttgaagtgcatccacatcgggttgttgtgtgttcagaaaaaacctgcaagcaggccgacgatttcgtcagtaaacatcatgcttagcagcaacactgttcgtctcccttctctatccaggccggccttctgcatccaggaggttagtgccagtgacagctctaatccgtattcagaacgctatgcaagaccaagacattccgggtattctgataattcaacagtggtgtcttcgaatgatttgtcaatcacagagcttgtgccgagatga
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| Protein seq | MRRHRSYLAGVAAAAAAAATATFLVAVLLHAPLAAGDDEPPPWVLCAPYPPSGNYSRNGTYQANLDLLSTTLPKNTSSSPAMYATGTVGDVPDKVYGLALCRGDANASACERCVAAALRDAPRRCPLVKDVLVFYDLCQLRYSNRDFFLDDDYFVTTYTLQRSRRVGAAAAAAFDAAVAVLVNATADYAAADSSRRYGTGEEEGVDGDSDRPKIYALAQCTPDKTPEVCRTCLSTVIGQLPKEFSGRTGGGMFGVWCNFRYEVFPFFSGRPLLQLPAFVETPPPPPSPSATSGEKTKNRIGAVLAIVMPAIAAVLLMVVACVCCWKRIKKRRPEEQTFLSYSVSSDDIQSIDSLILDLPTIRVATDDFADTKMIGQGGFGMVYKGVLPDGQEIAVKRLCQSSRQGIGELKSELILVAKLYHKNLVRLIGVCLEQQEKILVYEYMPNRSLDIILFDTDKNRNLDWGKRFKIINGIARGLQYLHEDSQLKIVHRDLKASNILLDFDYSPKISDFGLAKIFGGDQSEDVTNRIAGTFGYMAPEYAMRGNYSIKSDVFSFGVLVLEIITGRRNTGSYDSGQDVDLLNLVWEHWTRGNVVELIDPSMGDHPPIEQMLKCIHIGLLCVQKKPASRPTISSVNIMLSSNTVRLPSLSRPAFCIQEVSASDSSNPYSERYARPRHSGYSDNSTVVSSNDLSITELVPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.971326 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0541400 | RBH | 1.803285 | 3.408428 | 1.390971 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35690 | RBH | 1.221557 | 2.327666 | 0.351449 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0541400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018220 | RBH | 0.733268 | 0.437266 | 1.296835 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0018150 | RBH | 0.421669 | 0.0 | 0.797935 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0018140 | RBH | 1.545840 | 1.374515 | 3.374890 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0018030 | RBH | 0.385726 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0018150 | RBH | 2.921951 | 0.000000 | 6.277181 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0350400 | RBH | 1.5241015 | 2.257421 | 0.5908695 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018640 | RBH | 0.140182 | 0.000000 | 0.403180 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0361500 | RBH | 1.343703 | 2.7381895 | 0.756851 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017910 | RBH | 0.351750 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0018070 | RBH | 0.661556 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017910 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018220 | RBH | 0.916645 | 0.869835 | 0.192412 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0018040 | RBH | 0.106799 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017940 | RBH | 0.481728 | 0.0 | 0.136193 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0018000 | RBH | 1.779205 | 6.212101 | 1.974819 |
