Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsGoSa_06g0023110 | OGI:06072900 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr06:27082035-27083839 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ttaaatccaaaccaaaccgagaattctctcctcttccaccttctcagccttctcagcttctttcttctggaactcaaacttttctctctccaatttgttctgttcttcctgcagagcaaaggctctcttgcacctctcttcctgcagagcaaaggctttcttgcacatctcttctttcttcaactctctcacaacatcagcttctttcttcttttccatcagatagtccactgcttctatggttctaccctgtcgtagcttctgttttgccgccttctttccatccggtcttacagatggttgagcatcagaacaatagacatcaagatcagcaggttcaactgatgtaggacttgaatttgccactgtcttctgtttcttattgcttggttttttggcacatccaactttcttccgattgtccatccacttgggcttgtccttcaggatattccagcaatgcatcaagttaaacttcctatgcttcttatcttcctccttaaacaattcacatgcatttgcgatctacacatttgaaaccaaaataaacatgagaactaaaaattgcgacaaataatcataccacagaaataatgtgtttaccttgtcatcaactctggaaccactctggttcctagcctctattctggacatacatccacagaaaatattcacatcatgttgtattgcggaccaacgattcaataaagaggattcagaacgcgttgactcaaactctttgttggcatggaaatattcatgtattcttgcccaatatgtgccttgtgattgatctactccttgaataggatccatgcccacattcagccaagttgacacaagaaggatgtccttctgagtagtgaaatttttggtcctaccctgagaaatcttggcagctgttggagttccattggagattggatcactagtaggtgcggcaaattgagattcatcaacatcatttactaggaggtcagtgaaataacctgattgcgtaccatctgtcacaggaaaataaatggagaataaacatcatgtaggaatgtaagccggcaatagggaaagcaactacaccactggttccattcagcatctcagggcatgggaagctcaagatttgcatgggaactctggctgaataacatgatatgcaaactagacaattgtagtaatgtaactactatcgagctgaataaaattatatgcaatgtggacatttgcagcaatgtaaataacagagtattatccttttaaattacctactctcttgctattgtaaactatcttattttgtggaaattattgtgatgtgaatgcaggatggaagatttatagcaaaacgagactcagggtaggtcctgtttatttacttgcaaagaagaagcaatttgatctggatgaatctttcattcaaatgtactgtactaacaagtagctactctggtcaggtgcgaagaaagacatcaattttatttccagaaacctacaaccaacatgaatgcaatcccaaaatcctcaggtagaatacagaaagagctaaacttcctgtgatctagtcatccaactaacagcaaagggtttgacagacgtagatagtgagtctcacctgtgcagacctcctcatcggtgacttgctcaccgatgaacagaccttgtgccttccaaccatcgacgcctattggaggaaccacccgatggcgcatcgatccaatacccgactgatccaagtccccttccgggcgatgagcatcctgatccaagtccctagccgccgttgaagcaggacgcggcggcctccacat
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CDS seq | atgtggaggccgccgcgtcctgcttcaacggcggctagggacttggatcaggatgctcatcgcccggaaggggacttggatcagtcgggtattggatcgatgcgccatcgggtggttcctccaataggcgtcgatggttggaaggcacaaggtctgttcatcggtgagcaagtcaccgatgaggagatgatcgcaaatgcatgtgaattgtttaaggaggaagataagaagcataggaagtttaacttgatgcattgctggaatatcctgaaggacaagcccaagtggatggacaatcggaagaaagttggatgtgccaaaaaaccaagcaataagaaacagaagacagtggcaaattcaagtcctacatcagttgaacctgctgatcttgatgtctattgttctgatgctcaaccatctgtaagaccggatggaaagaaggcggcaaaacagaagctacgacagggtagaaccatagaagcagtggactatctgatggaaaagaagaaagaagctgatgttgtgagagagttgaagaaagaagagatgtgcaagaaagcctttgctctgcaggaagagaggtgcaagagagcctttgctctgcaggaagaacagaacaaattggagagagaaaagtttgagttccagaagaaagaagctgagaaggctgagaaggtggaagaggagagaattctcggtttggtttggatttaa
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Protein seq | MWRPPRPASTAARDLDQDAHRPEGDLDQSGIGSMRHRVVPPIGVDGWKAQGLFIGEQVTDEEMIANACELFKEEDKKHRKFNLMHCWNILKDKPKWMDNRKKVGCAKKPSNKKQKTVANSSPTSVEPADLDVYCSDAQPSVRPDGKKAAKQKLRQGRTIEAVDYLMEKKKEADVVRELKKEEMCKKAFALQEERCKRAFALQEEQNKLEREKFEFQKKEAEKAEKVEEERILGLVWI |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsGoSa_06g0023110 | OsGoSa_06g0023110.01 | Chr06 | 27082035 | 27083839 | - | NAM | ||
CDS seq | atgtggaggccgccgcgtcctgcttcaacggcggctagggacttggatcaggatgctcatcgcccggaaggggacttggatcagtcgggtattggatcgatgcgccatcgggtggttcctccaataggcgtcgatggttggaaggcacaaggtctgttcatcggtgagcaagtcaccgatgaggagatgatcgcaaatgcatgtgaattgtttaaggaggaagataagaagcataggaagtttaacttgatgcattgctggaatatcctgaaggacaagcccaagtggatggacaatcggaagaaagttggatgtgccaaaaaaccaagcaataagaaacagaagacagtggcaaattcaagtcctacatcagttgaacctgctgatcttgatgtctattgttctgatgctcaaccatctgtaagaccggatggaaagaaggcggcaaaacagaagctacgacagggtagaaccatagaagcagtggactatctgatggaaaagaagaaagaagctgatgttgtgagagagttgaagaaagaagagatgtgcaagaaagcctttgctctgcaggaagagaggtgcaagagagcctttgctctgcaggaagaacagaacaaattggagagagaaaagtttgagttccagaagaaagaagctgagaaggctgagaaggtggaagaggagagaattctcggtttggtttggatttaa
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Protein seq | MWRPPRPASTAARDLDQDAHRPEGDLDQSGIGSMRHRVVPPIGVDGWKAQGLFIGEQVTDEEMIANACELFKEEDKKHRKFNLMHCWNILKDKPKWMDNRKKVGCAKKPSNKKQKTVANSSPTSVEPADLDVYCSDAQPSVRPDGKKAAKQKLRQGRTIEAVDYLMEKKKEADVVRELKKEEMCKKAFALQEERCKRAFALQEEQNKLEREKFEFQKKEAEKAEKVEEERILGLVWI
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0635500 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g42890 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os06g0635500 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0023560 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0023400 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0023520 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0023150 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0023570 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0405000 | RBH | 0 | 0 | 0.010422 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0023040 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0386400 | RBH | 0 | 0 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0023490 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0023430 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0023780 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0023380 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G023160 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0023360 | RBH | 0.0 | 0.0 | 0.0 |