Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_05g0021160 | OGI:05064560 | 13/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr05:24671244-24671807 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcactgttcaccgaaccttaagtgagttaccacgtctcgtaaatggcaccccccatctctaaatcctggcttcgccactgcaaagaaggggaggcggaggcgcagctgaacgtggcggaggctgagaagcttgtggcggaaggtctcgcggaaggcgaggaagagccagccaccgtcgtaggcgccgaagcagcgcgcggcgcgggcgtcgtgcgggacgccgaggccgtgtccgccgcagccgcggagggcgcacgagaaggaagggccgtcggcgcgcgggacgaggatccacgggagcgggcggcgatgcggcgcgtgctgcagcggcttgacggcgacgcgccagtcgtggcagacgcgggccatggtgcggcggtcgacgaggcacgtgaggcggttgtggacgaggcggagggcttccgccatgaagtcacgcgcgggcgccgccgcgtccatgggagaggcgaaggcggaggcgggggcgaggcgtgatggtggcgagggttgggcggcggaggaggaggtggaacgcgacgaggacgcttcgtcgttgtgcgccat
More
|
||||||||||
| CDS seq | atggcgcacaacgacgaagcgtcctcgtcgcgttccacctcctcctccgccgcccaaccctcgccaccatcacgcctcgcccccgcctccgccttcgcctctcccatggacgcggcggcgcccgcgcgtgacttcatggcggaagccctccgcctcgtccacaaccgcctcacgtgcctcgtcgaccgccgcaccatggcccgcgtctgccacgactggcgcgtcgccgtcaagccgctgcagcacgcgccgcatcgccgcccgctcccgtggatcctcgtcccgcgcgccgacggcccttccttctcgtgcgccctccgcggctgcggcggacacggcctcggcgtcccgcacgacgcccgcgccgcgcgctgcttcggcgcctacgacggtggctggctcttcctcgccttccgcgagaccttccgccacaagcttctcagcctccgccacgttcagctgcgcctccgcctccccttctttgcagtggcgaagccaggatttagagatggggggtgccatttacgagacgtggtaactcacttaaggttcggtgaacagtga
More
|
||||||||||
| Protein seq | MAHNDEASSSRSTSSSAAQPSPPSRLAPASAFASPMDAAAPARDFMAEALRLVHNRLTCLVDRRTMARVCHDWRVAVKPLQHAPHRRPLPWILVPRADGPSFSCALRGCGGHGLGVPHDARAARCFGAYDGGWLFLAFRETFRHKLLSLRHVQLRLRLPFFAVAKPGFRDGGCHLRDVVTHLRFGEQ |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_05g0021160 | OsGoSa_05g0021160.01 | Chr05 | 24671244 | 24671807 | - | NAM | ||
| CDS seq | atggcgcacaacgacgaagcgtcctcgtcgcgttccacctcctcctccgccgcccaaccctcgccaccatcacgcctcgcccccgcctccgccttcgcctctcccatggacgcggcggcgcccgcgcgtgacttcatggcggaagccctccgcctcgtccacaaccgcctcacgtgcctcgtcgaccgccgcaccatggcccgcgtctgccacgactggcgcgtcgccgtcaagccgctgcagcacgcgccgcatcgccgcccgctcccgtggatcctcgtcccgcgcgccgacggcccttccttctcgtgcgccctccgcggctgcggcggacacggcctcggcgtcccgcacgacgcccgcgccgcgcgctgcttcggcgcctacgacggtggctggctcttcctcgccttccgcgagaccttccgccacaagcttctcagcctccgccacgttcagctgcgcctccgcctccccttctttgcagtggcgaagccaggatttagagatggggggtgccatttacgagacgtggtaactcacttaaggttcggtgaacagtga
More
|
|||||||
| Protein seq | MAHNDEASSSRSTSSSAAQPSPPSRLAPASAFASPMDAAAPARDFMAEALRLVHNRLTCLVDRRTMARVCHDWRVAVKPLQHAPHRRPLPWILVPRADGPSFSCALRGCGGHGLGVPHDARAARCFGAYDGGWLFLAFRETFRHKLLSLRHVQLRLRLPFFAVAKPGFRDGGCHLRDVVTHLRFGEQ |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0539300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g40550 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0539300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0021310 | RBH | 0.000000 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0021270 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0021160 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0021180 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0021270 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0368900 | SBH | 0 | 0.0129825 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0020820 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0378300 | SBH | 0.010029 | 0 | 0.035935 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0021130 | RBH | 0.0 | 0.041376 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0021060 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0021200 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0021220 | RBH | 0.087657 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0021210 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G020680 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0021100 | RBH | 0.0 | 0.0 | 0.0 |
