Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_05g0018840 | OGI:05059060 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr05:22700758-22702758 | ||||||||
| Gene Symbol | CYP94C4, OsCYP94C4 | ||||||||||
| DNA seq | ttaacagtgaaacgttcgatataaaaacggtgtgcgctgagaatggcacaactctgtttcacacacacgcgcacaccccctcagggagggatcaggccggcgcacgcgcgcgcgcaaaaaaaaaaaaaaaaggatcgagagagaaaatccgtgttgtttgttcttcgtcatgggcgcggacgccaccacgttgcacatcgcggttcacgccctagcgagctccttgcaggcgcaggttgccgccgtcttcttcgtctcggccgcgtgcacggtggccctcgcgctgctgctggccttgctgcggctgcggccgccgtggtggtgcgcgtgcccggtgtgcgaggcgtacgtgaccgcgtcgtgggcgcgcgagttcgacaacctctgcgactggtacgcgcacctgctgcgccgcgcgccggggcgaaccgtgcacgtgcacgtgctcgggaacgtgctcaccgccaacccggccaccgtcgaccacatgctgcgctgccgcttcgacaactaccccaagggtgcccccttctcggccatcctcgccgacttcctcggccgcggcatattcaacgtcgacggcgacggctggctcttccagcgcaagctcgccgcggctgagctcgcctcgccggcgatacgagccttcgcggcgaacgtcgtggcctcggaactgcggtgccgcctcatccctctgcttcgctctgcctccagctacgggagcgagaggctgctggatctccaggacgtcttccgccgcttcgcgttcgactgcatatgcaagatctccttcggcctcgaccccggctgcctcgagctttcgctgccgatatcggcgttcgcggacgcgttcgacacggcgtcgatgctctcggcccggcgagcgacggtgcccatgcatgtcgtctggaagttgaagcggctactcaacatcggggaggagcgggagctccgcgacgcgatccgtctcgttgacgcgcttgccgccgaggtcatccggcaacgccgcaagctcggctccgccgcctccggtgacgacctcctgtcgcgattcatgggctccatcaacgacgacaagtacctacgcgacatcgtcgtgagcttcatgctcgccggccgcgacactgtcgcctcaggtctaaccgcgttcttcttgctcctctccgaccatcccgaggtggctgccgcaatccgggacgaggtcttccgcgtcgccggaggcagggaccccacggccgcctccttcgatttcgacaagctcaaggacatgcactacgtgcacgcggcgctgtacgagagcatgcggctgttcccgccggtgcagttcgactccaagttcgccgccggcgaagacacgctcccggacggcacgttcgtggcaaagggcacacgggtgacctaccacgcgtacgccatgggccggatggagtccctctggggccccgactgcgccgtgttcagaccggagcggtggctcagcggcggccggttcgtgccggagagcccgtacaggtacccggtcttccagggcggggtgcgcgtctgcataggcaaggatctcgccatcatggagatgaaggccgtcatcgtcgccgtcgtccttagcttcgacgtggaggcggtcgaccggagctcgcgccggcccaagttcgcgcctggcctcaccgccacgttcgccgggggcgtgccggtcagagtgcgccggcgagcgcactgcgcgccaagttagctcaatcaaatacgtcgcgtcgccactcgcgatcgatgcccttattcattttaattttttttcctcttctttttttgaaacgggaaacattagtctatgtcagcattgcacatggaaagctgcactgatctactgtgtcacttgagtcaacagtcaccactcaatttggcaagtgcgctgggttcttatcctccactcaagatttctctgtagaccataattaaagatttttccgattacacagaagatgtacaagaacacaaatagtagtc
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| CDS seq | atgggcgcggacgccaccacgttgcacatcgcggttcacgccctagcgagctccttgcaggcgcaggttgccgccgtcttcttcgtctcggccgcgtgcacggtggccctcgcgctgctgctggccttgctgcggctgcggccgccgtggtggtgcgcgtgcccggtgtgcgaggcgtacgtgaccgcgtcgtgggcgcgcgagttcgacaacctctgcgactggtacgcgcacctgctgcgccgcgcgccggggcgaaccgtgcacgtgcacgtgctcgggaacgtgctcaccgccaacccggccaccgtcgaccacatgctgcgctgccgcttcgacaactaccccaagggtgcccccttctcggccatcctcgccgacttcctcggccgcggcatattcaacgtcgacggcgacggctggctcttccagcgcaagctcgccgcggctgagctcgcctcgccggcgatacgagccttcgcggcgaacgtcgtggcctcggaactgcggtgccgcctcatccctctgcttcgctctgcctccagctacgggagcgagaggctgctggatctccaggacgtcttccgccgcttcgcgttcgactgcatatgcaagatctccttcggcctcgaccccggctgcctcgagctttcgctgccgatatcggcgttcgcggacgcgttcgacacggcgtcgatgctctcggcccggcgagcgacggtgcccatgcatgtcgtctggaagttgaagcggctactcaacatcggggaggagcgggagctccgcgacgcgatccgtctcgttgacgcgcttgccgccgaggtcatccggcaacgccgcaagctcggctccgccgcctccggtgacgacctcctgtcgcgattcatgggctccatcaacgacgacaagtacctacgcgacatcgtcgtgagcttcatgctcgccggccgcgacactgtcgcctcaggtctaaccgcgttcttcttgctcctctccgaccatcccgaggtggctgccgcaatccgggacgaggtcttccgcgtcgccggaggcagggaccccacggccgcctccttcgatttcgacaagctcaaggacatgcactacgtgcacgcggcgctgtacgagagcatgcggctgttcccgccggtgcagttcgactccaagttcgccgccggcgaagacacgctcccggacggcacgttcgtggcaaagggcacacgggtgacctaccacgcgtacgccatgggccggatggagtccctctggggccccgactgcgccgtgttcagaccggagcggtggctcagcggcggccggttcgtgccggagagcccgtacaggtacccggtcttccagggcggggtgcgcgtctgcataggcaaggatctcgccatcatggagatgaaggccgtcatcgtcgccgtcgtccttagcttcgacgtggaggcggtcgaccggagctcgcgccggcccaagttcgcgcctggcctcaccgccacgttcgccgggggcgtgccggtcagagtgcgccggcgagcgcactgcgcgccaagttag
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| Protein seq | MGADATTLHIAVHALASSLQAQVAAVFFVSAACTVALALLLALLRLRPPWWCACPVCEAYVTASWAREFDNLCDWYAHLLRRAPGRTVHVHVLGNVLTANPATVDHMLRCRFDNYPKGAPFSAILADFLGRGIFNVDGDGWLFQRKLAAAELASPAIRAFAANVVASELRCRLIPLLRSASSYGSERLLDLQDVFRRFAFDCICKISFGLDPGCLELSLPISAFADAFDTASMLSARRATVPMHVVWKLKRLLNIGEERELRDAIRLVDALAAEVIRQRRKLGSAASGDDLLSRFMGSINDDKYLRDIVVSFMLAGRDTVASGLTAFFLLLSDHPEVAAAIRDEVFRVAGGRDPTAASFDFDKLKDMHYVHAALYESMRLFPPVQFDSKFAAGEDTLPDGTFVAKGTRVTYHAYAMGRMESLWGPDCAVFRPERWLSGGRFVPESPYRYPVFQGGVRVCIGKDLAIMEMKAVIVAVVLSFDVEAVDRSSRRPKFAPGLTATFAGGVPVRVRRRAHCAPS |
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| Function | Cytochrome P450 94C1 [UniProtKB/Swiss-Prot:Q9ZUX1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_05g0018840 | OsGoSa_05g0018840.01 | Chr05 | 22700758 | 22702758 | + | NAM | ||
| CDS seq | atgggcgcggacgccaccacgttgcacatcgcggttcacgccctagcgagctccttgcaggcgcaggttgccgccgtcttcttcgtctcggccgcgtgcacggtggccctcgcgctgctgctggccttgctgcggctgcggccgccgtggtggtgcgcgtgcccggtgtgcgaggcgtacgtgaccgcgtcgtgggcgcgcgagttcgacaacctctgcgactggtacgcgcacctgctgcgccgcgcgccggggcgaaccgtgcacgtgcacgtgctcgggaacgtgctcaccgccaacccggccaccgtcgaccacatgctgcgctgccgcttcgacaactaccccaagggtgcccccttctcggccatcctcgccgacttcctcggccgcggcatattcaacgtcgacggcgacggctggctcttccagcgcaagctcgccgcggctgagctcgcctcgccggcgatacgagccttcgcggcgaacgtcgtggcctcggaactgcggtgccgcctcatccctctgcttcgctctgcctccagctacgggagcgagaggctgctggatctccaggacgtcttccgccgcttcgcgttcgactgcatatgcaagatctccttcggcctcgaccccggctgcctcgagctttcgctgccgatatcggcgttcgcggacgcgttcgacacggcgtcgatgctctcggcccggcgagcgacggtgcccatgcatgtcgtctggaagttgaagcggctactcaacatcggggaggagcgggagctccgcgacgcgatccgtctcgttgacgcgcttgccgccgaggtcatccggcaacgccgcaagctcggctccgccgcctccggtgacgacctcctgtcgcgattcatgggctccatcaacgacgacaagtacctacgcgacatcgtcgtgagcttcatgctcgccggccgcgacactgtcgcctcaggtctaaccgcgttcttcttgctcctctccgaccatcccgaggtggctgccgcaatccgggacgaggtcttccgcgtcgccggaggcagggaccccacggccgcctccttcgatttcgacaagctcaaggacatgcactacgtgcacgcggcgctgtacgagagcatgcggctgttcccgccggtgcagttcgactccaagttcgccgccggcgaagacacgctcccggacggcacgttcgtggcaaagggcacacgggtgacctaccacgcgtacgccatgggccggatggagtccctctggggccccgactgcgccgtgttcagaccggagcggtggctcagcggcggccggttcgtgccggagagcccgtacaggtacccggtcttccagggcggggtgcgcgtctgcataggcaaggatctcgccatcatggagatgaaggccgtcatcgtcgccgtcgtccttagcttcgacgtggaggcggtcgaccggagctcgcgccggcccaagttcgcgcctggcctcaccgccacgttcgccgggggcgtgccggtcagagtgcgccggcgagcgcactgcgcgccaagttag
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| Protein seq | MGADATTLHIAVHALASSLQAQVAAVFFVSAACTVALALLLALLRLRPPWWCACPVCEAYVTASWAREFDNLCDWYAHLLRRAPGRTVHVHVLGNVLTANPATVDHMLRCRFDNYPKGAPFSAILADFLGRGIFNVDGDGWLFQRKLAAAELASPAIRAFAANVVASELRCRLIPLLRSASSYGSERLLDLQDVFRRFAFDCICKISFGLDPGCLELSLPISAFADAFDTASMLSARRATVPMHVVWKLKRLLNIGEERELRDAIRLVDALAAEVIRQRRKLGSAASGDDLLSRFMGSINDDKYLRDIVVSFMLAGRDTVASGLTAFFLLLSDHPEVAAAIRDEVFRVAGGRDPTAASFDFDKLKDMHYVHAALYESMRLFPPVQFDSKFAAGEDTLPDGTFVAKGTRVTYHAYAMGRMESLWGPDCAVFRPERWLSGGRFVPESPYRYPVFQGGVRVCIGKDLAIMEMKAVIVAVVLSFDVEAVDRSSRRPKFAPGLTATFAGGVPVRVRRRAHCAPS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 13.725798 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0445100 | RBH | 1.155288 | 0.887813 | 3.411770 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g37250 | RBH | 0.312271 | 0.274596 | 0.187805 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0445100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0018930 | RBH | 0.480199 | 1.737125 | 1.415440 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0018860 | RBH | 0.209566 | 0.0 | 1.040905 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0018760 | RBH | 0.0 | 0.0 | 2.431302 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0018750 | RBH | 0.029096 | 0.048133 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0018980 | RBH | 9.044724 | 1.408280 | 2.305786 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0336000 | RBH | 10.712162 | 9.327379 | 29.142423 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0018510 | RBH | 0.222215 | 0.0 | 0.488683 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0345800 | RBH | 9.077694 | 5.319892 | 5.858266 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0018810 | RBH | 0.232979 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0018760 | RBH | 0.853107 | 4.930294 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0040050 | RBH | 1.179270 | 3.171404 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0018910 | RBH | 0.974374 | 0.194245 | 0.561944 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0018930 | RBH | 0.648763 | 1.131053 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G018410 | RBH | 0.255869 | 0.0 | 0.722436 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0018750 | RBH | 0.643809 | 3.945878 | 0.399555 |
