Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_05g0009400 | OGI:05028010 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr05:10318611-10321947 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgcgttctagcgggatcagcgtaattgttgtcgttcgccacctggcgtggctggtgctaattttgtgctcatggccgcgggttgcagctgctcaGgctcaacaagcaccaaaaactgatccagtcgaaggtttgtattgagttgttttgtttttccccatataaatcgcaggagtatagtacacttcggttgatatatggtgtcctctcttgccgcattgacacgagaagagttggaggaaatttgattcattAatcgcctagttttttcatctacatgattagtacttcatgacgagttaaccacacagcggccGccctgaacacgatcctagggagatggggcaagaaggcatcgtgggagtggaacattagcggcgagctctgcagcggtttcgcctctactgaaatcgactgggattactaccccaccatcaacccgttcatcaaatgcgattgcagtttcagcaacaacaccctctgccatattaccaaactgtacgtttgttttcatcagttgtgcaacatgtatctcgatgcggtgcctgaaaaatataagcaaaggaacatgtcagattatcgatacgtctgttttcaccagttgtgcaacatgtatctcgatgcatgcagtgcctgaaaatataagcaaaggaacatgtcagattattgattactagtatttccaattcatagagccatcacatcggtttatcctaaattgggtcctccggctccagtgacctttctttaatttgcatcttatttaggcaaaaccaaatatatcccaattagcacaattctcatatataggtattgcatgtctattatgcaggagggtatataaattgggagtagttggtcaaatacctgcagagctacagaatctcacccacctagagtatttgtatggtatctaagtcttttctccttaatcttgataactaattgttacactacagattaaggttttgccgtaaatataaattatattccatgttctttttgtgaaaacagacagcttatgctttttttctgctaattgacctagtgtttctttatgttgtcttcaggaactttaattataattacttgactggtgccattccatcattcattggaaaattcagttcaatgaaatatttgtaggagttacacatcacattctagatttatgtactatatccctttcatattataagtcgttttcagttttccaaatcaaatttctttagctttaatcaagtttgtaaaaaaatgtagcaatatttttctacataaaacaaagaaactattaaaatgttttcaatgttagatttaataaaactaatttggtgctagaaatattgctatattgttttataaacttgatcaaactttaaagaaatttgattttaaaaaagtcaaaacgacttttaatacgaaatggagagagtaccattcaatggttaatgttttttCttaattctgtttcatcatttgaagggcattagcttcaaattcactgtccggacaacttccaaaggaacttgggaacctcaccaatcttctctcgttgtaagataatctttcccatggcaaataaatcatcaactatttacttggactgcctcaaccaatataatacaacaaatattaatcgcataacttctcaacaataataaattaagtaataaaaaaccataattgcaaaaatatcataaactactaaacaacatgtaacagacaagtcagtgcaattccttttccatgtgttgcatcgtttgatcaggaaaacacgatgccccctttcttctattatatagttgaactaaaaaaatttaaatcactgctgaaatatttcattttcaattaggggcattaacttaaataattttaccggtgtacttcctgaagagctgggcaacatgaccaaacttcagcaattgtaagatgcttcgttagttcctaacatccaatttctacttctaaaagaattaaaatttgaaaagagcagatctgttgttgaccatgatagttacttcaatgttccaaaagcaggtatgttgctagttctggattcagcggtcggtttccttcgacgttttcaaagcttcgcaacctgaagttattgtacagtcaataacagagactcacctagtatgtttatggtgttttcttgctgaatgtcaaatatttttgtgtgcttgtaggagagcatcagacaatggattcatagggaagatacctcattattttggcagcatgactaatttagaagatatgtaagattaattatgtatattaacttgttaacatatcattcgctctatcctaatcagagacaaatgaaattttgcaacataaattttctgcatatatgattttcccattcgaatttgaacaatataatagcaaacatttccactcaacaaaattgcacacatctctatcacactaaatttatccagggggcatgttactacatcgagaTtttatgaaataaaaaaggaaaaaaaaactgttgatacacatacagcttactttaaccttactttaaataaatggtggcatgtattctttctaaagtatgagctttagtggtttcgaaggaaactcatttgaaggaccaattccagaaaatctgtctaatctgaccagattagaaaacttgtaagtatacttttttgtggtattgatctctcttgaagattgacaatgccaacgctgatgagttatttctgaaaaatacatgtgagcagacggattggagatatagtaagtggggcctcttcattggcatttatcagtaatctgacatctctgtaccaactgtatgtgatgtttttgcttcaaattaagtttacagtgtataggcaaatttgcaagttacaaaagttggatttcgttcttacacaggatattaagaaactgtaagatatcgggtgatctcagagcattagatttttccaagtttcgaacactaatatcgctgtaagtctcccaaccaccggctatggtgtcacatttcctcatgtagtgaaccatatgtactccaagtaatttatactatactgttgtggcacagggacctaagttttaacaatatcacagcccaacttccttaatccatcctacatttgtcgtgaattcctgtaagaaattctttcttgatattaattgagttttttcaagcaccttttaagcagatgagcatgttagatctcacatcttcaattgtgctcaatttaggtttattgggacaatttatgtaaggatgcatgatagtaaaagctcttcacatagagcaatgtatgtcaaaaataataatcagcggagcagtatagcacaaatattttga
More
|
||||||||||
| CDS seq | atgcgttctagcgggatcagcgtaattgttgtcgttcgccacctggcgtggctggtgctaattttgtgctcatggccgcgggttgcagctgctcaGgctcaacaagcaccaaaaactgatccagtcgaagttaaccacacagcggccGccctgaacacgatcctagggagatggggcaagaaggcatcgtgggagtggaacattagcggcgagctctgcagcggtttcgcctctactgaaatcgactgggattactaccccaccatcaacccgttcatcaaatgcgattgcagtttcagcaacaacaccctctgccatattaccaaactgtacgtttgttttcatcagttgtgcaacatgtatctcgatgcggtgcctgaaaaatataagcaaaggaacatgggcattaacttaaataattttaccggtgtacttcctgaagagctgggcaacatgaccaaacttcagcaattgtatgttgctagttctggattcagcggtcggtttccttcgacgttttcaaagcttcgcaacctgaagttattgagagcatcagacaatggattcatagggaagatacctcattattttggcagcatgactaatttagaagatattatgagctttagtggtttcgaaggaaactcatttgaaggaccaattccagaaaatctgtctaatctgaccagattagaaaacttacggattggagatatagtaagtggggcctcttcattggcatttatcagtaatctgacatctctgtaccaactgatattaagaaactgtaagatatcgggtgatctcagagcattagatttttccaagtttcgaacactaatatcgctgtttattgggacaatttatgtaaggatgcatgatagtaaaagctcttcacatagagcaatgtatgtcaaaaataataatcagcggagcagtatagcacaaatattttga
More
|
||||||||||
| Protein seq | MRSSGISVIVVVRHLAWLVLILCSWPRVAAAQAQQAPKTDPVEVNHTAAALNTILGRWGKKASWEWNISGELCSGFASTEIDWDYYPTINPFIKCDCSFSNNTLCHITKLYVCFHQLCNMYLDAVPEKYKQRNMGINLNNFTGVLPEELGNMTKLQQLYVASSGFSGRFPSTFSKLRNLKLLRASDNGFIGKIPHYFGSMTNLEDIMSFSGFEGNSFEGPIPENLSNLTRLENLRIGDIVSGASSLAFISNLTSLYQLILRNCKISGDLRALDFSKFRTLISLFIGTIYVRMHDSKSSSHRAMYVKNNNQRSSIAQIF |
||||||||||
| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [UniProtKB/Swiss-Prot:C0LGH2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_05g0009400 | OsGoSa_05g0009400.01 | Chr05 | 10318611 | 10321947 | + | NAM | ||
| CDS seq | atgcgttctagcgggatcagcgtaattgttgtcgttcgccacctggcgtggctggtgctaattttgtgctcatggccgcgggttgcagctgctcaGgctcaacaagcaccaaaaactgatccagtcgaagttaaccacacagcggccGccctgaacacgatcctagggagatggggcaagaaggcatcgtgggagtggaacattagcggcgagctctgcagcggtttcgcctctactgaaatcgactgggattactaccccaccatcaacccgttcatcaaatgcgattgcagtttcagcaacaacaccctctgccatattaccaaactgtacgtttgttttcatcagttgtgcaacatgtatctcgatgcggtgcctgaaaaatataagcaaaggaacatgggcattaacttaaataattttaccggtgtacttcctgaagagctgggcaacatgaccaaacttcagcaattgtatgttgctagttctggattcagcggtcggtttccttcgacgttttcaaagcttcgcaacctgaagttattgagagcatcagacaatggattcatagggaagatacctcattattttggcagcatgactaatttagaagatattatgagctttagtggtttcgaaggaaactcatttgaaggaccaattccagaaaatctgtctaatctgaccagattagaaaacttacggattggagatatagtaagtggggcctcttcattggcatttatcagtaatctgacatctctgtaccaactgatattaagaaactgtaagatatcgggtgatctcagagcattagatttttccaagtttcgaacactaatatcgctgtttattgggacaatttatgtaaggatgcatgatagtaaaagctcttcacatagagcaatgtatgtcaaaaataataatcagcggagcagtatagcacaaatattttga
More
|
|||||||
| Protein seq | MRSSGISVIVVVRHLAWLVLILCSWPRVAAAQAQQAPKTDPVEVNHTAAALNTILGRWGKKASWEWNISGELCSGFASTEIDWDYYPTINPFIKCDCSFSNNTLCHITKLYVCFHQLCNMYLDAVPEKYKQRNMGINLNNFTGVLPEELGNMTKLQQLYVASSGFSGRFPSTFSKLRNLKLLRASDNGFIGKIPHYFGSMTNLEDIMSFSGFEGNSFEGPIPENLSNLTRLENLRIGDIVSGASSLAFISNLTSLYQLILRNCKISGDLRALDFSKFRTLISLFIGTIYVRMHDSKSSSHRAMYVKNNNQRSSIAQIF
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0253200 | SBH | 0.0 | 0.0 | 0.173666 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g18090 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0253200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0009410 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0009450 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0009360 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0009440 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0009520 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0142600 | SBH | 1.7083545 | 22.403785 | 0.557805 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0009380 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0145600 | SBH | 1.727006 | 46.4663545 | 0.021656 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0009350 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0009300 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0009440 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0009420 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G009180 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0009410 | SBH | 0.0 | 60.670998 | 0.0 |
