Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_04g0028820 | OGI:04098330 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr04:35562055-35563413 | ||||||||
| Gene Symbol | RLCK170, OsRLCK170 | ||||||||||
| DNA seq | atgaagtacacctctcttgctctaggtaagcatcattcatgtgatcgtctcgtgtgcttgacttggttttttttctgttttaatttcgtttaatttctaatggaaattttgtgcacacatgtagctgggattatcatcggtggcattgccgccatcctggtcttgaagttcatcatgagatgcgtggaggccaagcacgccgaacgcgcgaggcggcgggaggaggaggcagtgccagtgtcgccgccggcgagcggcacgtacagcagcgtggacgtccgcgtcgagatggggtcggtggaccgcttcctggacgacatcctccgggagaagccggcgcggttcacgccggagaacctccgcgagttcacgggggactacgcggagcggctcggcgccggcggcttcggcgtggtgtaccgcggcaggttccccggcggcgtgcaggtggccgtcaagatcctgcaccgcacgctggaccgccgcgccgaggagcagttcatggcggaggtcgccaccgcggggcgcacctaccacatcaacctcgtccgcctctacggcttctgcttcgacgccaccaccaaggcgctcgtctacgagtacctcgagaacggctcgctcgaccgcgtcctgttcgacgccgccgcggcggccgccctcgagttcgacacgctgcacggcatcgtcgtcggcacggcgcgcggggtgaggtacctgcacgaggagtgccagcaccggatcatccactacgacatcaagccggggaacgtgctgctcgccggcgactacgcgcccaaggtggccgacttcgggctcgccaagctctgcagccgcgacaacacccacctgacgatgaccggcgcgcggggcacgccggggtacgcggcgccggagctgtggctgccgctgccggtgacgcacaagtgcgacgtgtacagcttcggcatgctggtgttcgagatcctcgggcggcggcgcaacctcgacacccagcgcccggcggagagccaggagtggtaccccaggtgggcgtggcagaggttcgaccagggccggttcggcgaggtcatggcggcgtcggggatccggagcaaggacggcgagaaggcggagaggatgtgcaaggtggcgctctggtgcatacagtaccagccggaggcgaggccgtcgatgagcagcgtcgtcaggatgctcgaaggggaggagcagatcgcgcggcccgtcaacccgttcgcgtacatggcgaccatggacgcgatctccagctccagctccggcggcggcggcgtcagcaccgccacctccgcctccgcctccggcgactcggcgcaatcgactcgACatgacatctgccattga
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| CDS seq | atgaagtacacctctcttgctctagctgggattatcatcggtggcattgccgccatcctggtcttgaagttcatcatgagatgcgtggaggccaagcacgccgaacgcgcgaggcggcgggaggaggaggcagtgccagtgtcgccgccggcgagcggcacgtacagcagcgtggacgtccgcgtcgagatggggtcggtggaccgcttcctggacgacatcctccgggagaagccggcgcggttcacgccggagaacctccgcgagttcacgggggactacgcggagcggctcggcgccggcggcttcggcgtggtgtaccgcggcaggttccccggcggcgtgcaggtggccgtcaagatcctgcaccgcacgctggaccgccgcgccgaggagcagttcatggcggaggtcgccaccgcggggcgcacctaccacatcaacctcgtccgcctctacggcttctgcttcgacgccaccaccaaggcgctcgtctacgagtacctcgagaacggctcgctcgaccgcgtcctcttcggcatgctggtgttcgagatcctcgggcggcggcgcaacctcgacacccagcgcccggcggagagccaggagtggtaccccaggtgggcgtggcagaggttcgaccagggccggttcggcgaggtcatggcggcgtcggggatccggagcaaggacggcgagaaggcggagaggatgtgcaaggtggcgctctggtgcatacagtaccagccggaggcgaggccgtcgatgagcagcgtcgtcaggatgctcgaaggggaggagcagatcgcgcggcccgtcaacccgttcgcgtacatggcgaccatggacgcgatctccagctccagctccggcggcggcggcgtcagcaccgccacctccgcctccgcctccggcgactcggcgcaatcgactcgACatgacatctgccattga
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| Protein seq | MKYTSLALAGIIIGGIAAILVLKFIMRCVEAKHAERARRREEEAVPVSPPASGTYSSVDVRVEMGSVDRFLDDILREKPARFTPENLREFTGDYAERLGAGGFGVVYRGRFPGGVQVAVKILHRTLDRRAEEQFMAEVATAGRTYHINLVRLYGFCFDATTKALVYEYLENGSLDRVLFGMLVFEILGRRRNLDTQRPAESQEWYPRWAWQRFDQGRFGEVMAASGIRSKDGEKAERMCKVALWCIQYQPEARPSMSSVVRMLEGEEQIARPVNPFAYMATMDAISSSSSGGGGVSTATSASASGDSAQSTRHDICH |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [UniProtKB/Swiss-Prot:Q9FLV4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_04g0028820 | OsGoSa_04g0028820.01 | Chr04 | 35562055 | 35563413 | + | NAM | ||
| CDS seq | atgaagtacacctctcttgctctagctgggattatcatcggtggcattgccgccatcctggtcttgaagttcatcatgagatgcgtggaggccaagcacgccgaacgcgcgaggcggcgggaggaggaggcagtgccagtgtcgccgccggcgagcggcacgtacagcagcgtggacgtccgcgtcgagatggggtcggtggaccgcttcctggacgacatcctccgggagaagccggcgcggttcacgccggagaacctccgcgagttcacgggggactacgcggagcggctcggcgccggcggcttcggcgtggtgtaccgcggcaggttccccggcggcgtgcaggtggccgtcaagatcctgcaccgcacgctggaccgccgcgccgaggagcagttcatggcggaggtcgccaccgcggggcgcacctaccacatcaacctcgtccgcctctacggcttctgcttcgacgccaccaccaaggcgctcgtctacgagtacctcgagaacggctcgctcgaccgcgtcctcttcggcatgctggtgttcgagatcctcgggcggcggcgcaacctcgacacccagcgcccggcggagagccaggagtggtaccccaggtgggcgtggcagaggttcgaccagggccggttcggcgaggtcatggcggcgtcggggatccggagcaaggacggcgagaaggcggagaggatgtgcaaggtggcgctctggtgcatacagtaccagccggaggcgaggccgtcgatgagcagcgtcgtcaggatgctcgaaggggaggagcagatcgcgcggcccgtcaacccgttcgcgtacatggcgaccatggacgcgatctccagctccagctccggcggcggcggcgtcagcaccgccacctccgcctccgcctccggcgactcggcgcaatcgactcgACatgacatctgccattga
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| Protein seq | MKYTSLALAGIIIGGIAAILVLKFIMRCVEAKHAERARRREEEAVPVSPPASGTYSSVDVRVEMGSVDRFLDDILREKPARFTPENLREFTGDYAERLGAGGFGVVYRGRFPGGVQVAVKILHRTLDRRAEEQFMAEVATAGRTYHINLVRLYGFCFDATTKALVYEYLENGSLDRVLFGMLVFEILGRRRNLDTQRPAESQEWYPRWAWQRFDQGRFGEVMAASGIRSKDGEKAERMCKVALWCIQYQPEARPSMSSVVRMLEGEEQIARPVNPFAYMATMDAISSSSSGGGGVSTATSASASGDSAQSTRHDICH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0655400 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g56130 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0655400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0029370 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0030130 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0029700 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0029520 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0029790 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0527200 | RBH | 0.0075025 | 0.272281 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0028420 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0531500 | RBH | 0 | 0.4793595 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0028870 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0028710 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0028810 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0029400 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0029380 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G028840 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0028620 | RBH | 0.0 | 0.000000 | 0.0 |
