Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_04g0024230 | OGI:04088370 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr04:32013375-32024915 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaccatgtgatatctggtctgcctttcttcatttctcttccatgttcacagtcacacttggttgagaggtacattatcccatggtcaggtagcgcagtgcctagacgcgccaaaccaattgcggtctgatttgcctcctcttcgacccgccaagctatgtactccctttgagcccatccaggagggatcacaaactcagaagatgaagaacatccgtcctcatcctgaccatttccattgttacagacttcagatagctcagaagacgaagcatcttgtaaagaaccatttccattgttactgacttcagatagctcagcaggcgaagcatcctgtaaagaaccatttccattgtaacagacttcagatagctcagcgggtgaagcatcttgtagagagtcactgttctcatatttaccactctcgcagttactgtcattcggtggttcactaggtgatgcatcctgcaaagaaccgtcatactcatctttatcattctcactgctacagtcattgagtggcttaacaggtgatgcgtcttgtgaagaactatcactctcattgttagtctctttggatgacccagcaagcacaccagccccctcacacggcatcaaatccatgtaccagtagctatgtaagaatgaatcatgagctcttgcaggtgggcaagagattttgttgcaccaacgtatcaccgtgagatcgtccccctcaacgatcagctttttaactggttcatgatgctcaagcatgatttctagcccatgttcaagtgcttgaatactagccacagtctgatccacgttacctaaggaaccgatgaagtaggagagtgcaccttcatcattgtggaatacaccacccatgccagcagaacgatttttggagcagccagtgccatggaagttgagcttgatccaacccttgggtggaggggaccaagtattccgatggattgctgggattcggtgccggaactcctgtccccagaattgaggttcatcatccttgcagtcgccttgatcttgtttaaatggacgcaacattctttctttcaggtgcatatggaaataagacacgactgaaaacacaaacacaagaacattacataattagtcttattgacctaaattttgattcagcatgtacaaacactaatcaaatgaagaatgttaagtagcaagatattgcccttaagtctcaagaggtcttactcaaaagcaaagaaggaattatattccagttccaattcaaagttaaggaaaaacttttacttaagagacaaccctgcaaagttagctccaccatcaaacaagagtaccgaaaaaaaaaatgagttcagaagaaaaacacacatacttggcacatttgagttcatgtccacatcagcggcaacatcaagaaactcaaccctcagttcagagactccccagaattcctcatcaaagttttccaaaacaattacttcatcaatataattaatacttgcccaaagaaacctgtctctttccaaagctaaggaacccttgataccagtaaatccacagctcctgttttcaagtgcagcagaaatacttttcccactattcttgaacccataggaaactagaatgatcttatttaattgcttagcagtgaaatttgactcaatgagatttccaacgaatttcaatcctgaaacaaagaaaagtgtaggcttgtcaacacttctttggcattgctcattcaccaaaagcactcatagacccaagtcgaagcatgctttgacatcagcaggagagagtgctggatcatatatttcaatgtcaccaattgggaatatattatctgcctttagaagaagagcgaaggcaagctgatattgagacttcacatcaaattcaaagctcccaaggccataaataaccaattggatgcattcatgagctcccaacatgcttgaaatgtgagaagaaacgctctcatctttcttcacatgatcaataaactttgtgtacagtgcagaactcctaacatcagaaatagtttcatgcatttctttagctatgcttttagcttcctgtaagtgcttgtcctcaatgtatgcatcactaggatttaaatgccacctggtcgattaattcatttagaaaaggaattaatttgtgatgtcaacaatagcgaacgacaaaatacatcccacaaaattattagcgcacgtgaaaaatcataaaacagatggcctagaaacatagtcgatgattgataaaacaacaaacaggtgctgcaggctgcagcaatctgccaagtcatttttatttctctgttcaggacaaacttgagttaatcactgaagtaaaagaagaacatgcattgtagcaatactataattaatgcaaatctcacttaaacggtaaaatagcccattttacataagaaaccctttttttagggtacacgcaagaaagctgcctaaaatggtgtaatcatctttgcttgagttatccttcattaaatatttctttaaaccaaagcatcattttgtttacttaaaattcacagaattcagcaagcaaataatcatgggaaactggtccaaattaattgttttgtcagtatgcaatcttacccttctaactgagcatcacaattcatttggacattgacataactccagacctttgtagcacaattatctgcatcaaacaaagcagcaacaagtcatcagacaacatagtccatgtaggcaccacgttaagcttttacaaaaagggaaatgggctgcaaaagaacctggtatcaagtgttcaatatcaacttcaggatcaaactgaaagaaatgaactgaaaagatgctgggaagagcataaatcatggcagccctctcaatatgcgcaatgcagtgcatgcatatacacttctctgatgaatgattgtagacagaccggttcaattcatcaggatactcatctcccaagagagggttatcgaacaaaccagatatctcagcacaaagctctaattcctgaacatagctctgaattgccagtaccctcctcaccttctccctctgctctgacaccacacttctcttgcttcgaaatgctgagctcaagcatcttcaccatggcactgaaactgtgcccgagaacgacgatcttgccgagctgatctggggtccagttcaaggtgagcaaattctcaaagaagacgcgatccgcgtagggcatgaagatcagagttggctgttcgaccacaaggcagagcgcaggcgacgcggtgacaacgcagcccagctcctccatggcccggcgctccaccggggccacggtgggatccaccacctcgacggcgccgaccagctcggggaacttgtcccgcaggaggagcagcaaggcgaggcggaaccgcggcgcccagctgtaccgcatgccgccgagcctgtacgccacgacgcggagccgctcgcgtccgcggccgcggccgcggacgcgcgccaggccgtcgaggcacgcggcgtcggaggagaggcacgcggagagcttcgcgaagagcggcgacgtcacggcgagctccgtggcgagccgcaggaaggacaagagccgcgcgtggtcgcccatcacgaactcctccatgatcaggcctggccacgggaccgccgcgtgaagagaaagaagccgcagcaaatcaaaaaagttggagaggagaaggtAaaaccctcaccatgtggagcaggagggagtactcgtcgatcttggccaggttcttccgtctccgccatctcccccgtcaccctgcagagatctggagccgcgagaacggaagagctgatcagtagtatgcagtatgcagcgaagaggaggaggaggcgatgaggcggttactactactgcgaggaggaggaggaggaggcagtgaagcggaagttgccatgggcaaagtgggctttgtgggcgggcgtctgcgtctctcctgggcttcctttgtgtcgcggccgtctctcccgtctcgcgcagtggactgtgggaagaaaatggtcttggcacgggggttgcgttttcagttccattgactgtcaagtctgtcacagtttcagagtgtgtcagagatattttgttgcttccttgcggcaaaaaggaaaagggaaaaaggatttgtgtatgaatcacacagatttgatttgcttggaggctgaacgctgaaagcatgtctcgaatcacgcgattatggcaagcgagtactgcctttgatccacgctcatctcatttttatttgtgtagcagagaataaagttggggggaaataactttggtgtttatcattaaatgagatgagcggtagttgaagataaaacgaaaaagaaaattatgatctgattgatacccttattattatggttgtgcttattagtccatcaccaagttacagatagggtgccgttaaatacttaaatgtagtgctcccttttaaatatttgatgtttagataaagatttgctcatgcttttatagttccaaaaatcaattttatattagaatgtgtttgtaaattttgacttcgggtggcaatgggatggattcatatgatacgccgctaatcttgaaaactgacaatgctgaagttgttgcgtcctaatcgaacaagaatccctcgagaacaagaatccctcgagatcggctggggcaacgacggtccatgaaacgaaaggtgcgatgcaatgctttcaaagagtgcaagtgcacaaaataggaaaagaagctaagagggtagtacatactcttaatcaaacgacgacgaattcaagatcttgctaggaggggagattatgtgtgcttgcacggattttgaattggttgaatcaggaatctaatcccttcgttcagttatcaataaagctatctctttaccgtaaaaagtacattttaatattaagtttatggtattatggtagtatttttttaggcaaatccaagtatattatttattttgtttttaaactaaatatctataaaaaaaattgataatcaaaattttaaaagttggatcgaactttgttccaagcaccaaatatttaaatatttttggttggagcgagagtaatgattttcttatgggagttttaTttttggagatattcaggtggtgtttggttggagggactaaagtggggctaaactttagtccctctcacaaaaacataagtccctatcatagggacttatacttttgtaagagggaccctagttcccaaacaccccctcattaacttggatataatatgatgctgactgttggcacatggtacaacttcagctgcagcatttcgcctacttggggataaaaacgctagcgaaattcttgactcaccgagtatcgtttatgtaaaaatagtatagtttctaatcattttcacttttaaccacatattatatttagctatttttaatttcttctagcaccatactgcatttgccactaaatagttaaactaataaaatatggaaattccagatcgaccgataatcattttttataaacgatgtgtttccgaccgctatatatgtttacatttttcgcactaatttcaggaatgccgagcaatgcaggaagagtgccatcacctgtttgtagcgtgtccgtccaatcgagtgtggaggatgctcgaaggatggacaattgtgtgctttctgctgccaggcgagagcgaactggagcctaaaagctagcaggttggtgactgagcacaagactgtgttttcggacgagctagaggcatacgtagaacaaattatctttgtataaaggctggttggtgtgaaaggaacacaatgctcgattttcgatcaatgatcacgaacggtagtgcaacttttcgaagctattttgagattgttgtttggaaggaggccgagttgttttgagataaccgtacgggctgattttctcctccggagttcaggtttttcgcctgaacgctgggtcttcacattttcatttcgatattgtaatgttcccatactgtaaattcttcaactcttaatacaatttggtcagccaattcttcagctggcctggtagaaagaTttttttttaaaaaaaaagatataccaaaaactacaattgaatctgcaaatgaactatcaaaaggcacataaaaatttccccaaagaacacataatttaaatttttcatcggaccattcaaacatacattcagatttgagaatatttggaatgccagacacaggcaaaactgttttagcatcagagtgctggttccacacgacaaggccctccactccttattagcttggctcctcaacaggcaaacctgtagcatatggtgatcgttaataatgcacaaaaatagcacttgtggacttgtggctacataatggatcggcaaaatggagaggttctcaccaactgtgatgtctggtagcctgccattcctcatttctctttggatttcacagtcacactgggttgagctgtgtacctttacccgattctgatggtcaggtagcatactgcctagacgtgccaatccaattgcgacctgattagcctcttcatcgacccgccaagctatgtactccctttcaaattgcttagcaggtgaagcatctgcaaagaaccattcctactgttacagacttcagatagcttaatagcagataaagaatattgtaaagaactatgattctctatctttaccattctcgatgttaccgtcattcggtggcttagtaggtgatgcatcatgtgaagaactaccattctcatggtcagggtctttggatatctcagcaggcacggcagccccctcacatggcaatggcatcgaagtcaagtgcaagtaactacgtaggaatgaatcatgcgctcttgcaggcgggtgagagactctgttgaaccaacgtatcaccgtgagatcgtccccctcaacgatcagctttttaactggttcatggtactcaagcatgacctttagcccaagttcaattgctccaatactagccacggtttgatccacgttacctaatgaaccaataaagaaggagagcacaccatcctcattgtgaaatacaccacccatgccagcagaacgatctttggaaccaccaatgccgtggaaattgaacttgatccaacctttgggaggaggagaccaagtcttccgatgcattgctgggattcggtgcaggaattcatgtgcccagtcttgaggtttaccatccttgcaatcgtcttgatcgtcttgaaatggacgcgacattctttcttccaagcacatacgaaaataagacacatggctgaaaatacagagacaataacagtacatgattcagcatgtaacaacactagacaatgaatgctactaagtaacaagatattgcccataagtctcaagaaggcgtactcaaaagcaaagaaAGaattatattccagctccaatttgaagttaagtaaaaacttttccttaagagtcggccttgcaaagtcagctccaccatcaaacaaaagtaatgaaaacaaaaaaaaatgaggtaaattggtataaatcgaagatgttcggaagcaaaaacacatacttggcaaatttgagttcatgtccacatcagcagcaacatcaaggaactcaaatctcatatcagagactccccagaagtgggcattaaaattttccatcacaatgacttcattaatataatttatgcttgcccaaataaacctctctctttccaattctggggaacccttcaaactggtaaatccattgttccaattttcaagttcggcagaaattctatccccgatattcttgaccccataggaaattagaataatattgtttaattgctcaggagagaaatttgactcaatgaggtttccaacaaatgccagtcctggaacaaagaaaattatcggcttgtcaacacttctttggcattgttcattaaccaagagcacccgtagatccaagtcgaagcatgctttcacatcagcaggaggtagtgatggatcatagatttcgatatcactaattgggaatatattgtcttcctttagtagtagagcaaaagcaatctgatattgggacttcacatcaaattcaaagctcccaatgccataaacaaccaattgaatgcattcatgagctcccaacatgcttgagatgtgagaacaaatgctctgatctttcttcatgtgatcaacaaactttgtgatagcgtagaattcctaacatcagaaatagtttcacgcatttctttaactatgctttcagcttcatataagtgtctgtcctcaatgtatgcatcactaggatttaaatgccacatggtgaattgattcatttggaaaggaatctattatattattaagacagctcgaaaagaaggcaccacgttcgctgtgggggctagaaattcccacattaatcggagaaaaagaaaaaaaagaaaagaagagtccaagtaggagtacaatttaaaaaatgctgaaattcggaattaaaaataagcaatattgaaagaagtttccatataagaacccaatacgatattaatcaaaaataaaaataaaaataaaataaaattcaaaattagaaaagaaaaagagagtccaggtagaaatacaatttaaaaatagctgaaattcggaattaaaaataagcaatattgaaagaaatttccatataaggacccaatacgagattaatcaaaattcgaaataaaaaTaaaataaaatccaaaattagaaaaggaaatgagagtccaagtaggaatacaatttaagaatagctgaaattcggaattaaaaataaggaatattaaaagaagagtccatataagaacccaatacgagattaattaaacatcagaaaaaaataaataaatccgaaattagcaaaagaaaataaaagaagagttcaagtaggaatacaatttaaaattagctgaaatttggaattaaaaataaacaatattgaaagaaaaatccatataagaacccaatacgagattaattaaaatttagaataaaaaataaaataatatctaaaatagaaaaataaaaagagagttaaagtaggaatacaattttaaaacaactgaaattgaaaatAaaaaataaaagcattaaaagaacacaaaacggtattaatacgccatacaaaaattgttaataaaacaccaaatagaatcctaaatgacgattaaagggagggacgtcaggcaggctgtgaagcaaatgagtaaggcggttgccgggacttctataaagtaaaaaaaaacaaacctcattgataatcatattcgatttttaaaatctcaatgacaataaaagcagtaggcggggtgtataacagtatagttgcagagccgccaacggttgacgggacttctagaaaataaaaaaatgaattccaacaatagttatgttcgatttttagaatcacaatgacaataaagagtcggcggcggacgggctatagaggggcatagtggcatcgtttgatgggacttctaaaaattataaaaaatgaaactacaagtctaatttttaaaggttcggaacttctagaaagtaaaaaaaaCaatgataatcatgttcgattttaaaatctcaatgacaataaagaagggagccagtgggtgagccgccgaggagtacaatgacaaagccgctgacggtttggcgggacttctagaaagtaaaaatgaacccaaaagataattatgttcgatttttaaaatctcaatgacaataaagaaaagagacagtggacgggccgtagaggagtataatggcaacgtttgacgggacatctagaaattataaaaatgaaacacaacgtgacaataaactctaaaaactataaaatccaatttttaaaggttccaagaagaatgaatagaaatagtggtagatcgagcaagcaaataaagaagaagatgacataaggggtagcaactggtgtgactttaaaaaactatataattagaaacacgaggatgataaggtttagtctttcaaagtcttaagacaatgagatatctattttataaattttaagtaatatcataaaaaatatatgattttgtttgggtgctagccgcgcaattgcgcgggccacccagctagttagttttgaagtcatcaatagtgaacaacaaaaatataccacaaaaattaaggcatgtgcttcacatgtgacatatcgcaacaaaccaattgttaaagttaatgactgcagtaaaacaacaaacatgttttacaaaaatatgttgtttttatttctctgttcaggacaaatttgagttaatcgccgaagcaaaacaataacctgcactgcagcaatagtacaaagcaaatctcactcaaacagagaaccccttttacacaagaaaccctttcttttagcaaacatatcttgtttgcatcatcctttcttttatttttgaaaccaaattatactttcatttagcttaaaattcatagaactaggcaaacaaataagcatggaaaactaatccaaatgattcgtttggcagtatgtagccttacccttctaactgagcatcatagcccatttggacattgacattgctcccgacccttgtagcgcaattacctgcatcgaagaaagaggcaacaagtcagaagaccataatgccacaatccatattggcgcgcgcgcgcagacccacccacccacacacacacacacactcttaagctttgaaaaaaaaggaaatgagctgcaaaagaacctggtatcaaatattccatatcgatttcagcatcgaggtgaaagaaatgaattgaaaaggtgctgggaagagcacaaatcaaagcaccgctttccatacgcgcaacgcagtgcatgcatgtacactgctctggtgaattattgtagtcgtactggttcaattcataaggatactcatctcccaagagagggttatcgaataagccagatatctctgcacaaagctctaattcctgaacatagctcggaattgccagtaccctcttcaccttctccctctgctcattgacaccacacttctcttgctttgaaatgctgagctcaagcatcttcaccatggtgctgaaactgtgcccgagcacgacgatcttcccgagcttgtccgggctccagttcaagatgagcaaattctcaaagaagacacggtccgcgtatggcataaagatcagagttggttcttctaccaccaggcatagcgcaggagatgtggtgacaatgcagcccagctcctccatggcccggcgctccactggggccacggtgggatcaaccacctcgatggcgccaaccagctcgggaaacttgtcccgtaggaggagcagcacggcgaggcggaaccgtggcgcccagctgtaccgcaagccgccgagcctatacgccacgacacggagccgctcgtggccacgcccacggacgcgctccaggccctcgaggcacgcggcatcggaggagaagagcgcggagagcttcgcgaaaagcggcgatgacatggcaagctccat
More
|
||||||||||
| CDS seq | atggagcttgccatgtcatcgccgcttttcgcgaagctctccgcgctcttctcctccgatgccgcgtgcctcgagggcctggagcgcgtccgtgggcgtggccacgagcggctccgtgtcgtggcgtataggctcggcggcttgcggtacagctgggcgccacggttccgcctcgccgtgctgctcctcctacgggacaagtttcccgagctggttggcgccatcgaggtggttgatcccaccgtggccccagtggagcgccgggccatggaggagctgggctgcattgtcaccacatctcctgcgctatgcctggtggtagaagaaccaactctgatctttatgccatacgcggaccgtgtcttctttgagaatttgctcatcttgaactggagcccggacaagctcgggaagatcgtcgtgctcgggcacagtttcagcaccatggtgaagatgcttgagctcagcatttcaaagcaagagaagtgtggtgtcaatgagcagagggagaaggtgaagagggtactggcaattccgagctatgttcaggaattagagctttgtgcagagatatctggcttattcgataaccctctcttgggagatgagtatccttatgaattgaaccagtacgactacaataattcaccagagcagtgtacatgcatgcactgcgttgcgcgtatggaaagcggtgctttgatttgtgctcttcccagcaccttttcaattcatttctttcacctcgatgctgaaatcgatatggaatatttgataccaggtaattgcgctacaagggtcgggagcaatgtcaatgtccaaatgggctatgatgctcagttagaaggcatgttgggagctcatgaatgcattcaattggttgtttatggcattgggagctttgaatttgatgtgaagtcccaatatcagattgcttttgctctactactaaaggaagacaatatattcccaattagtgatatcgaaatctatgatccatcactacctcctgctgatgtgaaagcatgcttcgacttggatctacgggtgctcttggttaatgaacaatgccaaagaagtgttgacaagccgataattttctttgttccaggactggcatttgttggaaacctcattgagtcaaatttctctcctgagcaattaaacaatattattctaatttcctatggggtcaagaatatcggggatagaatttctgccgaacttgaaaattggaacaatggatttaccagtttgaagggttccccagaattggaaagagagaggtttatttgggcaagcataaattatattaatgaagtcattgtgatggaaaattttaatgcccacttctggggagtctctgatatgagatttgagttccttgatgttgctgctgatgtggacatgaactcaaatttgccaactgactttgcaaggccgactcttaaggaaaagtttttacttaacttcaaattggagctggaatataattCTttctttgcttttgaccatgtgtcttattttcgtatgtgcttggaagaaagaatgtcgcgtccatttcaagacgatcaagacgattgcaaggatggtaaacctcaagactgggcacatgaattcctgcaccgaatcccagcaatgcatcggaagacttggtctcctcctcccaaaggttggatcaagttcaatttccacggcattggtggttccaaagatcgttctgctggcatgggtggtgtatttcacaatgaggatggtgtgctctccttctttattggttcattaggtaacgtggatcaaaccgtggctagtattggagcaattgaacttgggctaaaggtcatgcttgagtaccatgaaccagttaaaaagctgatcgttgagggggacgatctcacggtgatacgttggttcaacagagtctctcacccgcctgcaagagcgcatgattcattcctacgtagttacttgcacttgacttcgatgccattgccatgtgagggggctgccgtgcctgctgagatatccaaagaccctgaccatgagaatggtagttcttcacatgatgcatcacctactaagccaccgaatgacggtaacatcgagaatgatgcttcacctgctaagcaatttgaaagggagtacatagcttggcgggtcgatgaagaggctaatcaggtcgcaattggattggcacgtctaggcagtatgctacctgaccatcagaatcgggtaaaggtacacagctcaacccagtgtgactgtgaaatccaaagagaaatgaggaatggcaggctaccagacatcacagttgatctctgcagggtgacgggggagatggcggagacggaagaacctggccaagatcgacgagtactccctcctgctccacatggcctgatcatggaggagttcgtgatgggcgaccacgcgcggctcttgtccttcctgcggctcgccacggagctcgccgtgacgtcgccgctcttcgcgaagctctccgcgtgcctctcctccgacgccgcgtgcctcgacggcctggcgcgcgtccgcggccgcggccgcggacgcgagcggctccgcgtcgtggcgtacaggctcggcggcatgcggtacagctgggcgccgcggttccgcctcgccttgctgctcctcctgcgggacaagttccccgagctggtcggcgccgtcgaggtggtggatcccaccgtggccccggtggagcgccgggccatggaggagctgggctgcgttgtcaccgcgtcgcctgcgctctgccttgtggtcgaacagccaactctgatcttcatgccctacgcggatcgcgtcttctttgagaatttgctcaccttgaactggaccccagatcagctcggcaagatcgtcgttctcgggcacagtttcagtgccatggtgaagatgcttgagctcagcatttcgaagcaagagaagtgtggtgtcagagcagagggagaagataattgtgctacaaaggtctggagttatgtcaatgtccaaatgaattgtgatgctcagttagaagggtggcatttaaatcctagtgatgcatacattgaggacaagcacttacaggaagctaaaagcatagctaaagaaatgcatgaaactatttctgatgttaggagttctgcactgtacacaaagtttattgatcatgtgaagaaagatgagagcgtttcttctcacatttcaagcatgttgggagctcatgaatgcatccaattggttatttatggccttgggagctttgaatttgatgtgaagtctcaatatcagcttgccttcgctcttcttctaaaggcagataatatattcccaattggtgacattgaaatatatgatccagcactctctcctgctgatgtcaaagcatgcttcgacttgggattgaaattcgttggaaatctcattgagtcaaatttcactgctaagcaattaaataagatcattctagtttcctatgggttcaagaatagtgggaaaagtatttctgctgcacttgaaaacaggagctgtggatttactggtatcaagggttccttagctttggaaagagacaggtttctttgggcaagtattaattatattgatgaagtaattgttttggaaaactttgatgaggaattctggggagtctctgaactgagggttgagtttcttgatgttgccgctgatgtggacatgaactcaaatgtgccaatcgtgtcttatttccatatgcacctgaaagaaagaatgttgcgtccatttaaacaagatcaaggcgactgcaaggatgatgaacctcaattctggggacaggagttccggcaccgaatcccagcaatccatcggaatacttggtcccctccacccaagggttggatcaagctcaacttccatggcactggctgctccaaaaatcgttctgctggcatgggtggtgtattccacaatgatgaaggtgcactctcctacttcatcggttccttaggtaacgtggatcagactgtggctagtattcaagcacttgaacatgggctagaaatcatgcttgagcatcatgaaccagttaaaaagctgatcgttgagggggacgatctcacggtgatacgttggtgcaacaaaatctcttgcccacctgcaagagctcatgattcattcttacatagctactggtacatggatttgatgccgtgtgagggggctggtgtgcttgctgggtcatccaaagagactaacaatgagagtgatagttcttcacaagacgcatcacctgttaagccactcaatgactgtagcagtgagaatgataaagatgagtatgacggttctttgcaggatgcatcacctagtgaaccaccgaatgacagtaactgcgagagtggtaaatatgagaacagtgactctctacaagatgcttcacccgctgagctatctgaagtctgttacaatggaaatggttctttacaggatgcttcgcctgctgagctatctgaagtcagtaacaatggaaatggttctttacaagatgcttcgtcttctgagctatctgaagtctgtaacaatggaaatggtcaggatgaggacggatgttcttcatcttctgagtttgtgatccctcctggatgggctcaaagggagtacatagcttggcgggtcgaagaggaggcaaatcagaccgcaattggtttggcgcgtctaggcactgcgctacctgaccatgggataatgtacctctcaaccaagtgtgactgtgaacatggaagagaaatgaagaaaggcagaccagatatcacatggtga
More
|
||||||||||
| Protein seq | MELAMSSPLFAKLSALFSSDAACLEGLERVRGRGHERLRVVAYRLGGLRYSWAPRFRLAVLLLLRDKFPELVGAIEVVDPTVAPVERRAMEELGCIVTTSPALCLVVEEPTLIFMPYADRVFFENLLILNWSPDKLGKIVVLGHSFSTMVKMLELSISKQEKCGVNEQREKVKRVLAIPSYVQELELCAEISGLFDNPLLGDEYPYELNQYDYNNSPEQCTCMHCVARMESGALICALPSTFSIHFFHLDAEIDMEYLIPGNCATRVGSNVNVQMGYDAQLEGMLGAHECIQLVVYGIGSFEFDVKSQYQIAFALLLKEDNIFPISDIEIYDPSLPPADVKACFDLDLRVLLVNEQCQRSVDKPIIFFVPGLAFVGNLIESNFSPEQLNNIILISYGVKNIGDRISAELENWNNGFTSLKGSPELERERFIWASINYINEVIVMENFNAHFWGVSDMRFEFLDVAADVDMNSNLPTDFARPTLKEKFLLNFKLELEYNSFFAFDHVSYFRMCLEERMSRPFQDDQDDCKDGKPQDWAHEFLHRIPAMHRKTWSPPPKGWIKFNFHGIGGSKDRSAGMGGVFHNEDGVLSFFIGSLGNVDQTVASIGAIELGLKVMLEYHEPVKKLIVEGDDLTVIRWFNRVSHPPARAHDSFLRSYLHLTSMPLPCEGAAVPAEISKDPDHENGSSSHDASPTKPPNDGNIENDASPAKQFEREYIAWRVDEEANQVAIGLARLGSMLPDHQNRVKVHSSTQCDCEIQREMRNGRLPDITVDLCRVTGEMAETEEPGQDRRVLPPAPHGLIMEEFVMGDHARLLSFLRLATELAVTSPLFAKLSACLSSDAACLDGLARVRGRGRGRERLRVVAYRLGGMRYSWAPRFRLALLLLLRDKFPELVGAVEVVDPTVAPVERRAMEELGCVVTASPALCLVVEQPTLIFMPYADRVFFENLLTLNWTPDQLGKIVVLGHSFSAMVKMLELSISKQEKCGVRAEGEDNCATKVWSYVNVQMNCDAQLEGWHLNPSDAYIEDKHLQEAKSIAKEMHETISDVRSSALYTKFIDHVKKDESVSSHISSMLGAHECIQLVIYGLGSFEFDVKSQYQLAFALLLKADNIFPIGDIEIYDPALSPADVKACFDLGLKFVGNLIESNFTAKQLNKIILVSYGFKNSGKSISAALENRSCGFTGIKGSLALERDRFLWASINYIDEVIVLENFDEEFWGVSELRVEFLDVAADVDMNSNVPIVSYFHMHLKERMLRPFKQDQGDCKDDEPQFWGQEFRHRIPAIHRNTWSPPPKGWIKLNFHGTGCSKNRSAGMGGVFHNDEGALSYFIGSLGNVDQTVASIQALEHGLEIMLEHHEPVKKLIVEGDDLTVIRWCNKISCPPARAHDSFLHSYWYMDLMPCEGAGVLAGSSKETNNESDSSSQDASPVKPLNDCSSENDKDEYDGSLQDASPSEPPNDSNCESGKYENSDSLQDASPAELSEVCYNGNGSLQDASPAELSEVSNNGNGSLQDASSSELSEVCNNGNGQDEDGCSSSSEFVIPPGWAQREYIAWRVEEEANQTAIGLARLGTALPDHGIMYLSTKCDCEHGREMKKGRPDITW |
||||||||||
| Function | Protein SENSITIVITY TO RED LIGHT REDUCED 1 [UniProtKB/Swiss-Prot:Q8GWZ6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_04g0024230 | OsGoSa_04g0024230.01 | Chr04 | 32013375 | 32024915 | - | NAM | ||
| CDS seq | atggagcttgccatgtcatcgccgcttttcgcgaagctctccgcgctcttctcctccgatgccgcgtgcctcgagggcctggagcgcgtccgtgggcgtggccacgagcggctccgtgtcgtggcgtataggctcggcggcttgcggtacagctgggcgccacggttccgcctcgccgtgctgctcctcctacgggacaagtttcccgagctggttggcgccatcgaggtggttgatcccaccgtggccccagtggagcgccgggccatggaggagctgggctgcattgtcaccacatctcctgcgctatgcctggtggtagaagaaccaactctgatctttatgccatacgcggaccgtgtcttctttgagaatttgctcatcttgaactggagcccggacaagctcgggaagatcgtcgtgctcgggcacagtttcagcaccatggtgaagatgcttgagctcagcatttcaaagcaagagaagtgtggtgtcaatgagcagagggagaaggtgaagagggtactggcaattccgagctatgttcaggaattagagctttgtgcagagatatctggcttattcgataaccctctcttgggagatgagtatccttatgaattgaaccagtacgactacaataattcaccagagcagtgtacatgcatgcactgcgttgcgcgtatggaaagcggtgctttgatttgtgctcttcccagcaccttttcaattcatttctttcacctcgatgctgaaatcgatatggaatatttgataccaggtaattgcgctacaagggtcgggagcaatgtcaatgtccaaatgggctatgatgctcagttagaaggcatgttgggagctcatgaatgcattcaattggttgtttatggcattgggagctttgaatttgatgtgaagtcccaatatcagattgcttttgctctactactaaaggaagacaatatattcccaattagtgatatcgaaatctatgatccatcactacctcctgctgatgtgaaagcatgcttcgacttggatctacgggtgctcttggttaatgaacaatgccaaagaagtgttgacaagccgataattttctttgttccaggactggcatttgttggaaacctcattgagtcaaatttctctcctgagcaattaaacaatattattctaatttcctatggggtcaagaatatcggggatagaatttctgccgaacttgaaaattggaacaatggatttaccagtttgaagggttccccagaattggaaagagagaggtttatttgggcaagcataaattatattaatgaagtcattgtgatggaaaattttaatgcccacttctggggagtctctgatatgagatttgagttccttgatgttgctgctgatgtggacatgaactcaaatttgccaactgactttgcaaggccgactcttaaggaaaagtttttacttaacttcaaattggagctggaatataattCTttctttgcttttgaccatgtgtcttattttcgtatgtgcttggaagaaagaatgtcgcgtccatttcaagacgatcaagacgattgcaaggatggtaaacctcaagactgggcacatgaattcctgcaccgaatcccagcaatgcatcggaagacttggtctcctcctcccaaaggttggatcaagttcaatttccacggcattggtggttccaaagatcgttctgctggcatgggtggtgtatttcacaatgaggatggtgtgctctccttctttattggttcattaggtaacgtggatcaaaccgtggctagtattggagcaattgaacttgggctaaaggtcatgcttgagtaccatgaaccagttaaaaagctgatcgttgagggggacgatctcacggtgatacgttggttcaacagagtctctcacccgcctgcaagagcgcatgattcattcctacgtagttacttgcacttgacttcgatgccattgccatgtgagggggctgccgtgcctgctgagatatccaaagaccctgaccatgagaatggtagttcttcacatgatgcatcacctactaagccaccgaatgacggtaacatcgagaatgatgcttcacctgctaagcaatttgaaagggagtacatagcttggcgggtcgatgaagaggctaatcaggtcgcaattggattggcacgtctaggcagtatgctacctgaccatcagaatcgggtaaaggtacacagctcaacccagtgtgactgtgaaatccaaagagaaatgaggaatggcaggctaccagacatcacagttgatctctgcagggtgacgggggagatggcggagacggaagaacctggccaagatcgacgagtactccctcctgctccacatggcctgatcatggaggagttcgtgatgggcgaccacgcgcggctcttgtccttcctgcggctcgccacggagctcgccgtgacgtcgccgctcttcgcgaagctctccgcgtgcctctcctccgacgccgcgtgcctcgacggcctggcgcgcgtccgcggccgcggccgcggacgcgagcggctccgcgtcgtggcgtacaggctcggcggcatgcggtacagctgggcgccgcggttccgcctcgccttgctgctcctcctgcgggacaagttccccgagctggtcggcgccgtcgaggtggtggatcccaccgtggccccggtggagcgccgggccatggaggagctgggctgcgttgtcaccgcgtcgcctgcgctctgccttgtggtcgaacagccaactctgatcttcatgccctacgcggatcgcgtcttctttgagaatttgctcaccttgaactggaccccagatcagctcggcaagatcgtcgttctcgggcacagtttcagtgccatggtgaagatgcttgagctcagcatttcgaagcaagagaagtgtggtgtcagagcagagggagaagataattgtgctacaaaggtctggagttatgtcaatgtccaaatgaattgtgatgctcagttagaagggtggcatttaaatcctagtgatgcatacattgaggacaagcacttacaggaagctaaaagcatagctaaagaaatgcatgaaactatttctgatgttaggagttctgcactgtacacaaagtttattgatcatgtgaagaaagatgagagcgtttcttctcacatttcaagcatgttgggagctcatgaatgcatccaattggttatttatggccttgggagctttgaatttgatgtgaagtctcaatatcagcttgccttcgctcttcttctaaaggcagataatatattcccaattggtgacattgaaatatatgatccagcactctctcctgctgatgtcaaagcatgcttcgacttgggattgaaattcgttggaaatctcattgagtcaaatttcactgctaagcaattaaataagatcattctagtttcctatgggttcaagaatagtgggaaaagtatttctgctgcacttgaaaacaggagctgtggatttactggtatcaagggttccttagctttggaaagagacaggtttctttgggcaagtattaattatattgatgaagtaattgttttggaaaactttgatgaggaattctggggagtctctgaactgagggttgagtttcttgatgttgccgctgatgtggacatgaactcaaatgtgccaatcgtgtcttatttccatatgcacctgaaagaaagaatgttgcgtccatttaaacaagatcaaggcgactgcaaggatgatgaacctcaattctggggacaggagttccggcaccgaatcccagcaatccatcggaatacttggtcccctccacccaagggttggatcaagctcaacttccatggcactggctgctccaaaaatcgttctgctggcatgggtggtgtattccacaatgatgaaggtgcactctcctacttcatcggttccttaggtaacgtggatcagactgtggctagtattcaagcacttgaacatgggctagaaatcatgcttgagcatcatgaaccagttaaaaagctgatcgttgagggggacgatctcacggtgatacgttggtgcaacaaaatctcttgcccacctgcaagagctcatgattcattcttacatagctactggtacatggatttgatgccgtgtgagggggctggtgtgcttgctgggtcatccaaagagactaacaatgagagtgatagttcttcacaagacgcatcacctgttaagccactcaatgactgtagcagtgagaatgataaagatgagtatgacggttctttgcaggatgcatcacctagtgaaccaccgaatgacagtaactgcgagagtggtaaatatgagaacagtgactctctacaagatgcttcacccgctgagctatctgaagtctgttacaatggaaatggttctttacaggatgcttcgcctgctgagctatctgaagtcagtaacaatggaaatggttctttacaagatgcttcgtcttctgagctatctgaagtctgtaacaatggaaatggtcaggatgaggacggatgttcttcatcttctgagtttgtgatccctcctggatgggctcaaagggagtacatagcttggcgggtcgaagaggaggcaaatcagaccgcaattggtttggcgcgtctaggcactgcgctacctgaccatgggataatgtacctctcaaccaagtgtgactgtgaacatggaagagaaatgaagaaaggcagaccagatatcacatggtga
More
|
|||||||
| Protein seq | MELAMSSPLFAKLSALFSSDAACLEGLERVRGRGHERLRVVAYRLGGLRYSWAPRFRLAVLLLLRDKFPELVGAIEVVDPTVAPVERRAMEELGCIVTTSPALCLVVEEPTLIFMPYADRVFFENLLILNWSPDKLGKIVVLGHSFSTMVKMLELSISKQEKCGVNEQREKVKRVLAIPSYVQELELCAEISGLFDNPLLGDEYPYELNQYDYNNSPEQCTCMHCVARMESGALICALPSTFSIHFFHLDAEIDMEYLIPGNCATRVGSNVNVQMGYDAQLEGMLGAHECIQLVVYGIGSFEFDVKSQYQIAFALLLKEDNIFPISDIEIYDPSLPPADVKACFDLDLRVLLVNEQCQRSVDKPIIFFVPGLAFVGNLIESNFSPEQLNNIILISYGVKNIGDRISAELENWNNGFTSLKGSPELERERFIWASINYINEVIVMENFNAHFWGVSDMRFEFLDVAADVDMNSNLPTDFARPTLKEKFLLNFKLELEYNSFFAFDHVSYFRMCLEERMSRPFQDDQDDCKDGKPQDWAHEFLHRIPAMHRKTWSPPPKGWIKFNFHGIGGSKDRSAGMGGVFHNEDGVLSFFIGSLGNVDQTVASIGAIELGLKVMLEYHEPVKKLIVEGDDLTVIRWFNRVSHPPARAHDSFLRSYLHLTSMPLPCEGAAVPAEISKDPDHENGSSSHDASPTKPPNDGNIENDASPAKQFEREYIAWRVDEEANQVAIGLARLGSMLPDHQNRVKVHSSTQCDCEIQREMRNGRLPDITVDLCRVTGEMAETEEPGQDRRVLPPAPHGLIMEEFVMGDHARLLSFLRLATELAVTSPLFAKLSACLSSDAACLDGLARVRGRGRGRERLRVVAYRLGGMRYSWAPRFRLALLLLLRDKFPELVGAVEVVDPTVAPVERRAMEELGCVVTASPALCLVVEQPTLIFMPYADRVFFENLLTLNWTPDQLGKIVVLGHSFSAMVKMLELSISKQEKCGVRAEGEDNCATKVWSYVNVQMNCDAQLEGWHLNPSDAYIEDKHLQEAKSIAKEMHETISDVRSSALYTKFIDHVKKDESVSSHISSMLGAHECIQLVIYGLGSFEFDVKSQYQLAFALLLKADNIFPIGDIEIYDPALSPADVKACFDLGLKFVGNLIESNFTAKQLNKIILVSYGFKNSGKSISAALENRSCGFTGIKGSLALERDRFLWASINYIDEVIVLENFDEEFWGVSELRVEFLDVAADVDMNSNVPIVSYFHMHLKERMLRPFKQDQGDCKDDEPQFWGQEFRHRIPAIHRNTWSPPPKGWIKLNFHGTGCSKNRSAGMGGVFHNDEGALSYFIGSLGNVDQTVASIQALEHGLEIMLEHHEPVKKLIVEGDDLTVIRWCNKISCPPARAHDSFLHSYWYMDLMPCEGAGVLAGSSKETNNESDSSSQDASPVKPLNDCSSENDKDEYDGSLQDASPSEPPNDSNCESGKYENSDSLQDASPAELSEVCYNGNGSLQDASPAELSEVSNNGNGSLQDASSSELSEVCNNGNGQDEDGCSSSSEFVIPPGWAQREYIAWRVEEEANQTAIGLARLGTALPDHGIMYLSTKCDCEHGREMKKGRPDITW
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g49930 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0024660 | RBH | 0.037404 | 0.0 | 0.499060 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0025420 | RBH | 0.0 | 0.0 | 0.329460 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0025080 | RBH | 0.0 | 0.0 | 0.773310 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0024850 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0025090 | RBH | 0.0 | 0.0 | 0.182614 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0470200 | RBH | 0.00761 | 0.034524 | 0.148295 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0023850 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0473300 | RBH | 0.0244325 | 0.072372 | 0.945128 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0024310 | RBH | 0.017238 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0024140 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0025860 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0024650 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0024870 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G024090 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0024000 | RBH | 0.0 | 0.0 | 0.000000 |
