Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_03g0016630 | OGI:03033050 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr03:13049908-13053857 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctcgctcgccgttacaaccttccacttcccactcccactccgcccactccccccttctcccctcccctctcccactgcaatggcgttctccggtaagccggcggcgacgtagacggccggcggcgtgcacggtaagccctgtttcggcgagtgcttgctactgccacccagtgaaagtcactgtctcactgctcattcttggaatgctccgtttctagtagtaactgaattctagctgggggctcttaatctcactcgcattttttgtttcttctcttcgatttgtgcagcggggaagaaggtgccgtttgaatcttggaggccaatcttctgaagattcaggcgaagctcgtcgtctcctGggcgcgttcttgcggcgtttcttggagcattttggctcgccgccggcggccttgcgcgttccggcttccgaggcaagaaggccatcctttttttttcttgctgctcgtgcgcgtttcggctctccggagtcgcggcaatgcgggctctggtggtgctggttggcttggcctgcctcgccttcgtggcggaggccaagggcggcggcgcggcctcggcggcggcgctggacgacgacgtgctggggctgatcgtgttcaaggccgacgtggtggacccggaggggcggctcgcgacgtggagcgaggacgacgagcggccttgcgcttgggccggtgtcacctgcgacccgctcaccggacgcgtcgcggggctctccctcgccggcttcggcctctccggcaagctcggccgcggcctcctccgcctcgagtcgctccagtccctctcgctctccggcaacaacttctccggcgacctccccgccgacctcgcccgcctcccggacctccagtcgctggacctcagcgccaacgctttctcgggcgccatcccggacggcttcttcggccactgccgcaacctccgcgacgtctccctggccaacaacgccttctccggcgacgtcccgcgcgacgtcggcgcgtgcgccacgctcgcgtcgctgaacctgtcctccaaccgcctcgccggcgcgctgccgagcgatatctggtcactgaacgccctgcgcacgctggacctctccggcaacgccatcaccggcgacttgccggtcggcgttagcaggatgttcaacctgcggtcgctgaacctgcggagcaaccgcctcgcaggcagcctccccgacgacattggggattgcccgctgctgaggtcagtggacctcggctccaacaacatctccggcaacctgccggagtcgctgcggaggctctccacttgcacataccttgacctgagctcaaacgcgctcaccggcaatgttccaacttgggttggagaaatggcaagcttggagacgcttgatttgtccgggaacaagttttccggggagatcccagggtcgattggcgggttgatgtcattgaaggagctgaggctgtcggggaatgggttcaccggtggcttgccggagtcaattggtggatgcaagagcctagtgcatgttgatgtgagctggaattctctgaccggcaccctgccttcctgggtctttgcttccggcgtgcaatgggtatcggtgtcggacaacaccttaagtggagaggtgtttgtacctgtgaatgcatcttcgatggttcgaggcgtggatttgtcgagcaatgcgttttcaggaatgatcccatctgaaatctctcaggtgatcaccttgcagtcactgaacatgtcctggaactcgctgtctgggagtattccgccgagcattgtgcagatgaagtcacttgaggtgcttgatttgactgcgaacaggctcaatggaagcattccagctactgttggaggagagtcattgagagagttgaggctggcgaagaactcccttactggagaaatcccagcacagattggcaatctctctgcccttgcatcactgtaagtttaagaacctctcactgattcgattcaatagttcggcaagcattgtatattgctcaaaccatttctactttatatatcgtctaacaccacactatcctgtttttggtgtatttactgtttgcagggatctctcacacaacaacctgacaggcgcaattccggcaacaatagccaacatcaccaacctgcagactgttgatctttctcggaacaagctcactggtggtctaccaaagcagctctctgacctgcctcaccttgtacgcttcaatatttcacataatcagctctctggggatctccctcctgggagcttttttgacactatccccctctcatcagtgtctgacaatcctggcctttgtggtgcaaagctaaattcttcttgtcctggtgtgttaccaaagccaattgtgctgaacccagactcttcttcggatccactatcacaacccgagcctacaccaaatggcctacgtcacaagaaaactatactaagcatctcagcccttgtcgcaattggtgctgctgttctcattactgttggtgtcataaccattacagttctcaaccttcgagtgcgcactccaggctctcattctgctgctgagctagaactctctgatggatatctcagccagtcccccacaactgatgtgaattcaggcaagcttgtcatgtttggaggcggtaatccagaattcagtgctagtacccacgctctcctgaacaaggactgtgagcttggtcgtggtgggtttggcactgtctataagactactctgcgagatggccaacctgttgccatcaagaaactgactgtgtctagcttggttaaatctcaagatgagtttgagagagaagtgaagatgctaggcaagctacgccaccgcaaccttgttGCgctcaagggatattattggacaccatcacttcagcttcttatatatgagtttgtttctGggggtaacttacataaacaactgcatgaatcatccactgcaaattgtctctcatggaaagagaggtttgatatagttcttggcattgcaagaagcctggcccatctccaccgccatgacattatccactacaatctgaagtcaagcaacattctgcttgatggatcaggcgatgccaaggtGggggactacggattggcaaagcttctgccgatgttggatcggtatgttctaagcagtaaggtccagagtgcacttggttacatggcaccagagtttgcgtgcaggactgtgaagatcactgaaaagtgtgacgtgtatggatttggagttcttgcccttgagatattgacagggaggacgccggtgcagtacatggaagatgatgttattgtgctttgcgatgtggtaagggctgctttggatgaagggaaggtggaagagtgtgttgatgagaggctctgcggaaaatttccgctagaggaggctgttccaatcatgaaacttggtctagtgtgcacttctcaggttccttccaataggccagacatgagtgaggtggtgaacatactggagttgatcagatgcccccaggatagccctgaaactgaattaggttaagctctatctgatgtggttcccttttttgttagttttcttattccattttaagatccttctttgcttggcaactgataaaatgatgagacatgaaggggattctatctgttatgcttagtactaggagcaagtgtgaagtttctgggtagtattttggtagctaaggagttattatgtaatgcatgaaatagtttcatggCctgtggctgttgatgtgtttgactctgatcctcatcaggatgttaactgttgtggatcctctcacatcaattatatatgctgtttccaattcttgcttggtctatttgtatgtaaaaattgatatgccgttgcgctctcactcagttccttgttcctttttgtagtgTttttacctggatgaaacatagaacatctcagttaatc
More
|
||||||||||
| CDS seq | atgcgggctctggtggtgctggttggcttggcctgcctcgccttcgtggcggaggccaagggcggcggcgcggcctcggcggcggcgctggacgacgacgtgctggggctgatcgtgttcaaggccgacgtggtggacccggaggggcggctcgcgacgtggagcgaggacgacgagcggccttgcgcttgggccggtgtcacctgcgacccgctcaccggacgcgtcgcggggctctccctcgccggcttcggcctctccggcaagctcggccgcggcctcctccgcctcgagtcgctccagtccctctcgctctccggcaacaacttctccggcgacctccccgccgacctcgcccgcctcccggacctccagtcgctggacctcagcgccaacgctttctcgggcgccatcccggacggcttcttcggccactgccgcaacctccgcgacgtctccctggccaacaacgccttctccggcgacgtcccgcgcgacgtcggcgcgtgcgccacgctcgcgtcgctgaacctgtcctccaaccgcctcgccggcgcgctgccgagcgatatctggtcactgaacgccctgcgcacgctggacctctccggcaacgccatcaccggcgacttgccggtcggcgttagcaggatgttcaacctgcggtcgctgaacctgcggagcaaccgcctcgcaggcagcctccccgacgacattggggattgcccgctgctgaggtcagtggacctcggctccaacaacatctccggcaacctgccggagtcgctgcggaggctctccacttgcacataccttgacctgagctcaaacgcgctcaccggcaatgttccaacttgggttggagaaatggcaagcttggagacgcttgatttgtccgggaacaagttttccggggagatcccagggtcgattggcgggttgatgtcattgaaggagctgaggctgtcggggaatgggttcaccggtggcttgccggagtcaattggtggatgcaagagcctagtgcatgttgatgtgagctggaattctctgaccggcaccctgccttcctgggtctttgcttccggcgtgcaatgggtatcggtgtcggacaacaccttaagtggagaggtgtttgtacctgtgaatgcatcttcgatggttcgaggcgtggatttgtcgagcaatgcgttttcaggaatgatcccatctgaaatctctcaggtgatcaccttgcagtcactgaacatgtcctggaactcgctgtctgggagtattccgccgagcattgtgcagatgaagtcacttgaggtgcttgatttgactgcgaacaggctcaatggaagcattccagctactgttggaggagagtcattgagagagttgaggctggcgaagaactcccttactggagaaatcccagcacagattggcaatctctctgcccttgcatcactggatctctcacacaacaacctgacaggcgcaattccggcaacaatagccaacatcaccaacctgcagactgttgatctttctcggaacaagctcactggtggtctaccaaagcagctctctgacctgcctcaccttgtacgcttcaatatttcacataatcagctctctggggatctccctcctgggagcttttttgacactatccccctctcatcagtgtctgacaatcctggcctttgtggtgcaaagctaaattcttcttgtcctggtgtgttaccaaagccaattgtgctgaacccagactcttcttcggatccactatcacaacccgagcctacaccaaatggcctacgtcacaagaaaactatactaagcatctcagcccttgtcgcaattggtgctgctgttctcattactgttggtgtcataaccattacagttctcaaccttcgagtgcgcactccaggctctcattctgctgctgagctagaactctctgatggatatctcagccagtcccccacaactgatgtgaattcaggcaagcttgtcatgtttggaggcggtaatccagaattcagtgctagtacccacgctctcctgaacaaggactgtgagcttggtcgtggtgggtttggcactgtctataagactactctgcgagatggccaacctgttgccatcaagaaactgactgtgtctagcttggttaaatctcaagatgagtttgagagagaagtgaagatgctaggcaagctacgccaccgcaaccttgttGCgctcaagggatattattggacaccatcacttcagcttcttatatatgagtttgtttctGggggtaacttacataaacaactgcatgaatcatccactgcaaattgtctctcatggaaagagaggtttgatatagttcttggcattgcaagaagcctggcccatctccaccgccatgacattatccactacaatctgaagtcaagcaacattctgcttgatggatcaggcgatgccaaggtGggggactacggattggcaaagcttctgccgatgttggatcggtatgttctaagcagtaaggtccagagtgcacttggttacatggcaccagagtttgcgtgcaggactgtgaagatcactgaaaagtgtgacgtgtatggatttggagttcttgcccttgagatattgacagggaggacgccggtgcagtacatggaagatgatgttattgtgctttgcgatgtggtaagggctgctttggatgaagggaaggtggaagagtgtgttgatgagaggctctgcggaaaatttccgctagaggaggctgttccaatcatgaaacttggtctagtgtgcacttctcaggttccttccaataggccagacatgagtgaggtggtgaacatactggagttgatcagatgcccccaggatagccctgaaactgaattaggttaa
More
|
||||||||||
| Protein seq | MRALVVLVGLACLAFVAEAKGGGAASAAALDDDVLGLIVFKADVVDPEGRLATWSEDDERPCAWAGVTCDPLTGRVAGLSLAGFGLSGKLGRGLLRLESLQSLSLSGNNFSGDLPADLARLPDLQSLDLSANAFSGAIPDGFFGHCRNLRDVSLANNAFSGDVPRDVGACATLASLNLSSNRLAGALPSDIWSLNALRTLDLSGNAITGDLPVGVSRMFNLRSLNLRSNRLAGSLPDDIGDCPLLRSVDLGSNNISGNLPESLRRLSTCTYLDLSSNALTGNVPTWVGEMASLETLDLSGNKFSGEIPGSIGGLMSLKELRLSGNGFTGGLPESIGGCKSLVHVDVSWNSLTGTLPSWVFASGVQWVSVSDNTLSGEVFVPVNASSMVRGVDLSSNAFSGMIPSEISQVITLQSLNMSWNSLSGSIPPSIVQMKSLEVLDLTANRLNGSIPATVGGESLRELRLAKNSLTGEIPAQIGNLSALASLDLSHNNLTGAIPATIANITNLQTVDLSRNKLTGGLPKQLSDLPHLVRFNISHNQLSGDLPPGSFFDTIPLSSVSDNPGLCGAKLNSSCPGVLPKPIVLNPDSSSDPLSQPEPTPNGLRHKKTILSISALVAIGAAVLITVGVITITVLNLRVRTPGSHSAAELELSDGYLSQSPTTDVNSGKLVMFGGGNPEFSASTHALLNKDCELGRGGFGTVYKTTLRDGQPVAIKKLTVSSLVKSQDEFEREVKMLGKLRHRNLVALKGYYWTPSLQLLIYEFVSGGNLHKQLHESSTANCLSWKERFDIVLGIARSLAHLHRHDIIHYNLKSSNILLDGSGDAKVGDYGLAKLLPMLDRYVLSSKVQSALGYMAPEFACRTVKITEKCDVYGFGVLALEILTGRTPVQYMEDDVIVLCDVVRAALDEGKVEECVDERLCGKFPLEEAVPIMKLGLVCTSQVPSNRPDMSEVVNILELIRCPQDSPETELG |
||||||||||
| Function | Probable LRR receptor-like serine/threonine-protein kinase IRK [UniProtKB/Swiss-Prot:Q9LY03] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_03g0016630 | OsGoSa_03g0016630.01 | Chr03 | 13049908 | 13053857 | + | NAM | ||
| CDS seq | atgcgggctctggtggtgctggttggcttggcctgcctcgccttcgtggcggaggccaagggcggcggcgcggcctcggcggcggcgctggacgacgacgtgctggggctgatcgtgttcaaggccgacgtggtggacccggaggggcggctcgcgacgtggagcgaggacgacgagcggccttgcgcttgggccggtgtcacctgcgacccgctcaccggacgcgtcgcggggctctccctcgccggcttcggcctctccggcaagctcggccgcggcctcctccgcctcgagtcgctccagtccctctcgctctccggcaacaacttctccggcgacctccccgccgacctcgcccgcctcccggacctccagtcgctggacctcagcgccaacgctttctcgggcgccatcccggacggcttcttcggccactgccgcaacctccgcgacgtctccctggccaacaacgccttctccggcgacgtcccgcgcgacgtcggcgcgtgcgccacgctcgcgtcgctgaacctgtcctccaaccgcctcgccggcgcgctgccgagcgatatctggtcactgaacgccctgcgcacgctggacctctccggcaacgccatcaccggcgacttgccggtcggcgttagcaggatgttcaacctgcggtcgctgaacctgcggagcaaccgcctcgcaggcagcctccccgacgacattggggattgcccgctgctgaggtcagtggacctcggctccaacaacatctccggcaacctgccggagtcgctgcggaggctctccacttgcacataccttgacctgagctcaaacgcgctcaccggcaatgttccaacttgggttggagaaatggcaagcttggagacgcttgatttgtccgggaacaagttttccggggagatcccagggtcgattggcgggttgatgtcattgaaggagctgaggctgtcggggaatgggttcaccggtggcttgccggagtcaattggtggatgcaagagcctagtgcatgttgatgtgagctggaattctctgaccggcaccctgccttcctgggtctttgcttccggcgtgcaatgggtatcggtgtcggacaacaccttaagtggagaggtgtttgtacctgtgaatgcatcttcgatggttcgaggcgtggatttgtcgagcaatgcgttttcaggaatgatcccatctgaaatctctcaggtgatcaccttgcagtcactgaacatgtcctggaactcgctgtctgggagtattccgccgagcattgtgcagatgaagtcacttgaggtgcttgatttgactgcgaacaggctcaatggaagcattccagctactgttggaggagagtcattgagagagttgaggctggcgaagaactcccttactggagaaatcccagcacagattggcaatctctctgcccttgcatcactggatctctcacacaacaacctgacaggcgcaattccggcaacaatagccaacatcaccaacctgcagactgttgatctttctcggaacaagctcactggtggtctaccaaagcagctctctgacctgcctcaccttgtacgcttcaatatttcacataatcagctctctggggatctccctcctgggagcttttttgacactatccccctctcatcagtgtctgacaatcctggcctttgtggtgcaaagctaaattcttcttgtcctggtgtgttaccaaagccaattgtgctgaacccagactcttcttcggatccactatcacaacccgagcctacaccaaatggcctacgtcacaagaaaactatactaagcatctcagcccttgtcgcaattggtgctgctgttctcattactgttggtgtcataaccattacagttctcaaccttcgagtgcgcactccaggctctcattctgctgctgagctagaactctctgatggatatctcagccagtcccccacaactgatgtgaattcaggcaagcttgtcatgtttggaggcggtaatccagaattcagtgctagtacccacgctctcctgaacaaggactgtgagcttggtcgtggtgggtttggcactgtctataagactactctgcgagatggccaacctgttgccatcaagaaactgactgtgtctagcttggttaaatctcaagatgagtttgagagagaagtgaagatgctaggcaagctacgccaccgcaaccttgttGCgctcaagggatattattggacaccatcacttcagcttcttatatatgagtttgtttctGggggtaacttacataaacaactgcatgaatcatccactgcaaattgtctctcatggaaagagaggtttgatatagttcttggcattgcaagaagcctggcccatctccaccgccatgacattatccactacaatctgaagtcaagcaacattctgcttgatggatcaggcgatgccaaggtGggggactacggattggcaaagcttctgccgatgttggatcggtatgttctaagcagtaaggtccagagtgcacttggttacatggcaccagagtttgcgtgcaggactgtgaagatcactgaaaagtgtgacgtgtatggatttggagttcttgcccttgagatattgacagggaggacgccggtgcagtacatggaagatgatgttattgtgctttgcgatgtggtaagggctgctttggatgaagggaaggtggaagagtgtgttgatgagaggctctgcggaaaatttccgctagaggaggctgttccaatcatgaaacttggtctagtgtgcacttctcaggttccttccaataggccagacatgagtgaggtggtgaacatactggagttgatcagatgcccccaggatagccctgaaactgaattaggttaa
More
|
|||||||
| Protein seq | MRALVVLVGLACLAFVAEAKGGGAASAAALDDDVLGLIVFKADVVDPEGRLATWSEDDERPCAWAGVTCDPLTGRVAGLSLAGFGLSGKLGRGLLRLESLQSLSLSGNNFSGDLPADLARLPDLQSLDLSANAFSGAIPDGFFGHCRNLRDVSLANNAFSGDVPRDVGACATLASLNLSSNRLAGALPSDIWSLNALRTLDLSGNAITGDLPVGVSRMFNLRSLNLRSNRLAGSLPDDIGDCPLLRSVDLGSNNISGNLPESLRRLSTCTYLDLSSNALTGNVPTWVGEMASLETLDLSGNKFSGEIPGSIGGLMSLKELRLSGNGFTGGLPESIGGCKSLVHVDVSWNSLTGTLPSWVFASGVQWVSVSDNTLSGEVFVPVNASSMVRGVDLSSNAFSGMIPSEISQVITLQSLNMSWNSLSGSIPPSIVQMKSLEVLDLTANRLNGSIPATVGGESLRELRLAKNSLTGEIPAQIGNLSALASLDLSHNNLTGAIPATIANITNLQTVDLSRNKLTGGLPKQLSDLPHLVRFNISHNQLSGDLPPGSFFDTIPLSSVSDNPGLCGAKLNSSCPGVLPKPIVLNPDSSSDPLSQPEPTPNGLRHKKTILSISALVAIGAAVLITVGVITITVLNLRVRTPGSHSAAELELSDGYLSQSPTTDVNSGKLVMFGGGNPEFSASTHALLNKDCELGRGGFGTVYKTTLRDGQPVAIKKLTVSSLVKSQDEFEREVKMLGKLRHRNLVALKGYYWTPSLQLLIYEFVSGGNLHKQLHESSTANCLSWKERFDIVLGIARSLAHLHRHDIIHYNLKSSNILLDGSGDAKVGDYGLAKLLPMLDRYVLSSKVQSALGYMAPEFACRTVKITEKCDVYGFGVLALEILTGRTPVQYMEDDVIVLCDVVRAALDEGKVEECVDERLCGKFPLEEAVPIMKLGLVCTSQVPSNRPDMSEVVNILELIRCPQDSPETELG
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 10.336967 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0335500 | RBH | 0.0 | 0.0 | 3.362851 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g21730 | RBH | 0.0 | 0.0 | 0.837761 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0335500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0016830 | RBH | 0.0 | 5.622693 | 3.976911 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016670 | RBH | 0.0 | 1.762480 | 1.128857 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016690 | RBH | 0.0 | 7.612202 | 4.059580 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016690 | RBH | 0.0 | 0.144849 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0016460 | RBH | 0.0 | 5.656148 | 7.559026 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0205000 | RBH | 5.892671 | 4.596191 | 10.4786295 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0016330 | RBH | 0.0 | 0.245756 | 0.471300 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0209600 | RBH | 6.3486145 | 0.594319 | 62.1515635 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0016560 | RBH | 0.0 | 0.099131 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0016600 | RBH | 0.0 | 4.076791 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027710 | SBH | 2.341721 | 14.307792 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0016520 | RBH | 0.0 | 0.611057 | 0.499930 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0016430 | RBH | 0.0 | 3.643443 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G016380 | RBH | 0.0 | 2.127652 | 3.159735 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0016350 | RBH | 0.0 | 3.762310 | 1.498337 |
