Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_02g0030160 | OGI:02081340 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr02:29983911-29988236 | ||||||||
| Gene Symbol | BRXL2, OsBRXL2, OsBRXL1 | ||||||||||
| DNA seq | gcacttaacaagcaatatatacaccattctaccgtcgaggatcacatgaaaccatgctaaaACaaacgaattaaacgaacaccctgtccataaAGgttacaaacggaagaccaaagtggtcagttaacaagagtagcagcttgactgagcctgctgcttctcagaccacagcatccttccccctcatcctatattcaccctgtAaaaaaaacctagtagcactaaccgtagcagcggcaaagtagtagtatcatcacactcttaactattcttcccggcgacgcgttagcttctgtcacagtatcacttcactctcatcaacgatgggtctcgcgttagctcacagatactgcgcgtgtatccggtcccGgttctgctcccaccacaccttggcccgctcctcgccaaatctctcgcggctgcaacgttgcgcacagagagaagtgttaaaaattccacgcgaacacgaggAaaatccagcgtgatctgccggtattggtgacgtgttagcgttttcgggatgtgtgtgtggactgtggagtggcttgcctgaaccggacgcggcggagctcgcgggtgccgtcgccgaactcgcggatggtgatggacaccccaggctcgtcctgctccacccactccgtggcctccaggtcgctcgcgttgctgatggacacggacgcctcgtcccGggacgacgtcgtgccgcgcgacgggtcgtacggcgccgctggtccggcggccgcggagttgaggaggttgaagtggtgcgcccacacgtggtcggacgggtccggcacggccgtggacgggtagaacggcggccgagccgccgccaccgacgacgacgacgacagctgcgccttgctcgacgctgtccggctgatcgggtgctccctgccagcacccgacgacggcagcggcggcggcggcggcatcatcatcgccgggctctccctcgtcgagccgacgcgggagtagaacgaatctctctgcaaacatcaaccatcatcagcaacggaatgtgcagagcttttgctaaccagtgatgaaacggaagtgacctgcatggcttcgtcgacggaggacgtcggcgtcgagaagccctgctgccggctgaacgtctgcacgttgtagagctccaccacgcggtcgtagttctccccccaccaccgctgcgcctcccacttgttaaacatctcccggctgcatatgcatcgccacaatccgttagctcatgctcatcactcgagcaccacgtgctcgacgaaatgtcatgtcgcttgattggcacgaacctgaaacggatgcgcttcagatcgttgccggcgccgccggggatggagacgaaggtgatctgcacgccgggctccacctgcgccgtccactcccgcggcacgcggtcctcctccaggaggactgtctcctcgtcatcgtcgtcgtcgtcgtcgtcgtagtcttcctccccgatgctcggtaccccgctcgcgctcgggctcctgatcacgcgcggctggaagctgcggtggttcaccttgggcggcaagtcccacgtcgacggcgcggcccgggcgccggcgctcgccgtcgtcgtcctcatgtaagtataggcctcgccggccccgtccgacgtgaagcccgactcgtcgatgatgcccgggtacgcggcgaggcggctggagcggtggaagcggctggtcctcaacgacgggctcccgccggacttgtattggtgcctgccgctgccggagaacttgagcaccatgtccttcaactgaaaccacattaaatttgtgcagattaattaattatcctcctgaataagggatcaattgattttccattgtaaaaatatttattaaatatccattagtcaagttaacatcatccttttttttttttgaacgaatgccaagttgacatcatcatacaacagatgatattatatatctgaggtaacatttttgccttgcatattcagtaaatataatttcttgcaattggcaacagagtggctgcatataacttttaacatgccattgcctttccagtatataaaactgcgggagtttcgttcggggcatcaacattcaccactaacgcacacgcctcagcaatcaaatcctacgcgacagctcggtctctcaagtaaagcgccaatcatatccacagcagggttaatgatcaccgatcgattccatctccatcccgatgattagggctaacaaaagcaggacagggcgcacttccgacccccagattagtcgcgtagacgcctagcagaagggctcacacatcaccgaaaagcaccaacAaaaccatcacaatgtcctaaaacccaggacatcttttgcctgaactctcaagcaaggaacaaagcaaagacaaagcacacccacaccacaccactcaagtttctcaaagcaacatcgtggacagcgcccccccccccccccccccccccccggatcataataacaccagagagggaagggaatcgatccggtccatccacacacacacacacacatagccacacaggtgcatgtcatgtggtgcgtgcttatgctccaaatatgtgtagtactagtactgctactttaaaagacggcaaaggcgaaagcgtgcaggaagcaaaggacgagagtactcgagtcccagtgacgaggcgtgtcatcatggagtagttcagagatgggtcgcagcgagagcccatcttaagaaacaaaccagcccatcgcaaggaccacaaGTgtgtgtttctgtgcatggcctacgggctggctacggcccagctttattcttctctgagtgtccaggaccgtcttgggggggggggggggtccctcttaagaaaagaaaagggaaaggaacatcttggactgaagagagtagctgcttgtttgataactcgaaggggattgggagtttacacgagggagttgatgatgagattaagatgggaatttgatttttaatcccaatatcttatttggtagaggtgatagaaattgatagggaatttagttggagattaggtcattaataaaaacggatggctgagatttggttaaacaaagtaaaggatgaattccctcctaattacctgcccctacccagttattgaaaaggagtgagttccttcctcaattccccatcctcatcccaccaaaattcccatgtctcccaaccaaacAaaaattttaatagcttcatccctctaaattcccaatccctactaaaaactccctccaaccaaacgggccgtaggagtaagacccaggggttaagatcaatcaaccagatagtgtctttccaggagggaaagatcacattagcagctactaggataggacagtcttttgttgggagcaagcaaagtgaatggatggatggatggatggagcaagtgaaaagggcaggggaatggtagtatgggggaacagaagtgaccatatcaaatcagtccaaaacccaaagcttgaggggatccatgcaagaaaaaagcaagagccttctctcccccaccaaactctagtcatattcccctgggccttgagtccttgaccaactttatcaaggaatgttttaaaatgtagttagagcactgtcattcaccttgtacttgtgattccatgcaggatattgccctgattagacacccggtgaggaagggaaaagaaaagagaaacggtgtatatcaccacaagtgtactagtattggttgtcctcctgtacgtagtggtactctgttccctttcaaaggccaagaacaaggtgacgacaagcaggctaggacaaaagaacaactacagtgtaatactttctcctccgtcccaaatgtaagcatttttgaggctgacacgggtattaagaaagtatatgagaatgattgaaaaatatgtgtgattggttgaaaagagaaaataggtgaaaaagaatggttgtgattggttgagaggaaaagataggtagaaaaatagcttcattttagaataaagtactgtgctagaaatagctatattttggaacggatgtagtactagaagtactagcaccccactgctaaggagcagcagagggcattcaattgactggttaatgcaacagaagaaaatgtggcatcaggtctccgcccatgcgctagtgcacaacatgtgcgagtactacggatttttacttgtgtacggagtactggagtagtataaGaatgcacatcagcacatgtacctgtgaagtcagagacttgccggagttgggcgtggcggtggcggaccggtgcccgccctccccgccgtccttggtcgaacacgcgatgcacgcaagcat
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| CDS seq | atgcttgcgtgcatcgcgtgttcgaccaaggacggcggggagggcgggcaccggtccgccaccgccacgcccaactccggcaagtctctgacttcacagttgaaggacatggtgctcaagttctccggcagcggcaggcaccaatacaagtccggcgggagcccgtcgttgaggaccagccgcttccaccgctccagccgcctcgccgcgtacccgggcatcatcgacgagtcgggcttcacgtcggacggggccggcgaggcctatacttacatgaggacgacgacggcgagcgccggcgcccgggccgcgccgtcgacgtgggacttgccgcccaaggtgaaccaccgcagcttccagccgcgcgtgatcaggagcccgagcgcgagcggggtaccgagcatcggggaggaagactacgacgacgacgacgacgacgatgacgaggagacagtcctcctggaggaggaccgcgtgccgcgggagtggacggcgcaggtggagcccggcgtgcagatcaccttcgtctccatccccggcggcgccggcaacgatctgaagcgcatccgtttcagccgggagatgtttaacaagtgggaggcgcagcggtggtggggggagaactacgaccgcgtggtggagctctacaacgtgcagacgttcagccggcagcagggcttctcgacgccgacgtcctccgtcgacgaagccatgcagagagattcgttctactcccgcgtcggctcgacgagggagagcccggcgatgatgatgccgccgccgccgccgctgccgtcgtcgggtgctggcagggagcacccgatcagccggacagcgtcgagcaaggcgcagctgtcgtcgtcgtcgtcggtggcggcggctcggccgccgttctacccgtccacggccgtgccggacccgtccgaccacgtgtgggcgcaccacttcaacctcctcaactccgcggccgccggaccagcggcgccgtacgacccgtcgcgcggcacgacgtcgtccCgggacgaggcgtccgtgtccatcagcaacgcgagcgacctggaggccacggagtgggtggagcaggacgagcctggggtgtccatcaccatccgcgagttcggcgacggcacccgcgagctccgccgcgtccggttcagccgcgagagatttggcgaggagcgggccaaggtgtggtgggagcagaacCgggaccggatacacgcgcagtatctgtga
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| Protein seq | MLACIACSTKDGGEGGHRSATATPNSGKSLTSQLKDMVLKFSGSGRHQYKSGGSPSLRTSRFHRSSRLAAYPGIIDESGFTSDGAGEAYTYMRTTTASAGARAAPSTWDLPPKVNHRSFQPRVIRSPSASGVPSIGEEDYDDDDDDDDEETVLLEEDRVPREWTAQVEPGVQITFVSIPGGAGNDLKRIRFSREMFNKWEAQRWWGENYDRVVELYNVQTFSRQQGFSTPTSSVDEAMQRDSFYSRVGSTRESPAMMMPPPPPLPSSGAGREHPISRTASSKAQLSSSSSVAAARPPFYPSTAVPDPSDHVWAHHFNLLNSAAAGPAAPYDPSRGTTSSRDEASVSISNASDLEATEWVEQDEPGVSITIREFGDGTRELRRVRFSRERFGEERAKVWWEQNRDRIHAQYL |
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| Function | Protein Brevis radix-like 2 [UniProtKB/Swiss-Prot:Q6ZIK7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_02g0030160 | OsGoSa_02g0030160.01 | Chr02 | 29983911 | 29988236 | - | NAM | ||
| CDS seq | atgcttgcgtgcatcgcgtgttcgaccaaggacggcggggagggcgggcaccggtccgccaccgccacgcccaactccggcaagtctctgacttcacagttgaaggacatggtgctcaagttctccggcagcggcaggcaccaatacaagtccggcgggagcccgtcgttgaggaccagccgcttccaccgctccagccgcctcgccgcgtacccgggcatcatcgacgagtcgggcttcacgtcggacggggccggcgaggcctatacttacatgaggacgacgacggcgagcgccggcgcccgggccgcgccgtcgacgtgggacttgccgcccaaggtgaaccaccgcagcttccagccgcgcgtgatcaggagcccgagcgcgagcggggtaccgagcatcggggaggaagactacgacgacgacgacgacgacgatgacgaggagacagtcctcctggaggaggaccgcgtgccgcgggagtggacggcgcaggtggagcccggcgtgcagatcaccttcgtctccatccccggcggcgccggcaacgatctgaagcgcatccgtttcagccgggagatgtttaacaagtgggaggcgcagcggtggtggggggagaactacgaccgcgtggtggagctctacaacgtgcagacgttcagccggcagcagggcttctcgacgccgacgtcctccgtcgacgaagccatgcagagagattcgttctactcccgcgtcggctcgacgagggagagcccggcgatgatgatgccgccgccgccgccgctgccgtcgtcgggtgctggcagggagcacccgatcagccggacagcgtcgagcaaggcgcagctgtcgtcgtcgtcgtcggtggcggcggctcggccgccgttctacccgtccacggccgtgccggacccgtccgaccacgtgtgggcgcaccacttcaacctcctcaactccgcggccgccggaccagcggcgccgtacgacccgtcgcgcggcacgacgtcgtccCgggacgaggcgtccgtgtccatcagcaacgcgagcgacctggaggccacggagtgggtggagcaggacgagcctggggtgtccatcaccatccgcgagttcggcgacggcacccgcgagctccgccgcgtccggttcagccgcgagagatttggcgaggagcgggccaaggtgtggtgggagcagaacCgggaccggatacacgcgcagtatctgtga
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| Protein seq | MLACIACSTKDGGEGGHRSATATPNSGKSLTSQLKDMVLKFSGSGRHQYKSGGSPSLRTSRFHRSSRLAAYPGIIDESGFTSDGAGEAYTYMRTTTASAGARAAPSTWDLPPKVNHRSFQPRVIRSPSASGVPSIGEEDYDDDDDDDDEETVLLEEDRVPREWTAQVEPGVQITFVSIPGGAGNDLKRIRFSREMFNKWEAQRWWGENYDRVVELYNVQTFSRQQGFSTPTSSVDEAMQRDSFYSRVGSTRESPAMMMPPPPPLPSSGAGREHPISRTASSKAQLSSSSSVAAARPPFYPSTAVPDPSDHVWAHHFNLLNSAAAGPAAPYDPSRGTTSSRDEASVSISNASDLEATEWVEQDEPGVSITIREFGDGTRELRRVRFSRERFGEERAKVWWEQNRDRIHAQYL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0700700 | RBH | 0.000000 | 0.095587 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g47230 | RBH | 0.000000 | 0.059343 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0700700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0030250 | RBH | 0.0 | 1.345277 | 2.088554 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0030340 | RBH | 0.000000 | 0.583116 | 1.140753 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0030200 | RBH | 0.287864 | 0.000000 | 0.451064 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0029790 | RBH | 0.045250 | 0.027018 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0030010 | RBH | 0.664235 | 0.0 | 0.741260 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0469400 | RBH | 1.778584 | 2.6519745 | 3.664155 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0029780 | RBH | 0.164867 | 0.090773 | 0.090319 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0496500 | RBH | 1.613405 | 0.599951 | 5.397268 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0030100 | RBH | 0.131415 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0029830 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0025020 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0030010 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0029680 | RBH | 0.059535 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G030250 | RBH | 0.0 | 0.000000 | 1.316630 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0030030 | RBH | 0.0 | 0.000000 | 0.935753 |
