Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_01g0037360 | OGI:01104600 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr01:36173624-36176196 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgcaagatcatatacttacagcttttctggttgtttctctcctctttgcatgcattcctcctgccaagagtgctgatctgaactccgacaagcaggctcttcttgcatttgctgcctcactgccacatggcaggaagctcaactggagctctgcagccccagtctgcacttcatgggttggggtgacttgcacaccagacaatagccgcgtgcaaacactacgcctaccagcagtagggctctttggcccgctaccctcagacacgcttggcaagcttgatgccctggaggtattgagccttaggtccaatcgcatcactgttgatctccctcctgaagtaggatccattccttctctccattccctatatcttcagcataataacctatccgggatcataccgacttcccttacttccactttaacatttctagatctgtcatacaacacttttgatggagaaatcccattgagagtgcaaaatctcactcaacttactgcattgcttctccagaatAactctctttctggacccatccctgacctccaactcccaaaattgaggcatttgaatttgagcaacaataacctcagtgggccaataccaccttccttgcaaagattcccagccaattccttcttggggaatgcttttctatgtgggtttcctttacaaccttgccctgggactgcaccttcaccttctccttctccaacatcaccatcacccggcaaggccaagaagggcttctggaaaaggatcagaactggtgttataattgcacttgctgccgcaggaggggtattgttgctaatcttgattgttttactcttgatatgtattttcaagagaaagaaaagcacagaacctactacagcttcttcgtcaaaaggaaaaactgttgctggtggaaggggagaaaatcctaaggaggagtacagcagtggtgttcaggaagctgagaggaataaattggttttctttgagggctgttcatataattttgacctagaggatttgctgagagcttcagctgaagtccttggaaaagggagttacggaactacttataaagctgttcttgaggatggcaccacagttgtggtcaagagattgaaggaggtggtcgtggggaagaaggattttgaacagcagatggagatagttggcagggttggccagcaccagaatgttgtcccattgcgtgcctactattactccaaggatgagaagctactggtgtatgactatatcccatctggtagccttgctgttgttttgcatggtatgcatttttcctcttttacatttgaactatttacctatctatttctgaaatctgaacatttagactatggagggctcctgctttTAttcttagatgatgtataacattcttgtaaaatcatgccatttagaaggaaccaaggaaacctgtttctcctccgggttattctctcatttttccattcataagtcgtaaccataggtttggaaatacatccatcaatagtactcactgtaagcagtgaatttagacttaaaaagtccgctttgatccatgctagcttttgcataagcataagccaaaccgctgaagtgaaatgacatggttgatgataaatacttgtagggaataaagctactggaaaagctccattggattgggagacgagggtaaagatatctcttggtgtggctcgtggaattgctcatcttcatgctgagggaggcgggaagttcatccatggcaacctcaagtcatcaaacatccttctgtcacagaacctcgacggctgtgtctctgagtttgggctggcacagcttatgaccattccaccagctccagcacgccttgtcggatatcgtgcaccagaagtcctcgagactaaaaagccaacccagaagtctgatgtctacagcttcggtgtgttggtcctcgaaatgctgacaggaaaagcgcctctgagatctcctggacgagaggactccattgagcacttgccaaggtgggtgcagtctgtggtccgggaagaatggaccgcggaggtttttgacgtcgacttgttaaggcatcccaacattgaggatgagatggttcagatgctccaggttgcaatggcatgtgttgccgccccccctgatcaacggccaaaaatggacgaggtgatcaggaggatcgttgagatccggaattcctactccgggtcaagaacaccaccggaggagaagcagaaggatgaatctgcagcgccatgagcgccattgtttagcaaaggtagctgctagctaggctgcatagttactggcttatagagagcttcagcaaagttgatagccgcttgctttagtgaggtttttctgctgatttctgatcttctttagataattttttttggggtttaattctcacagtagtgatctgttggtcattaccattgttccattccagttaaatcagtagctcttctgatttttcatagggtgatgttcagtgttctgtaatttgacatgcctttttttccagtgtgattaatgaattgagttttccttgcgatttcggctttgtc
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| CDS seq | atgcaagatcatatacttacagcttttctggttgtttctctcctctttgcatgcattcctcctgccaagagtgctgatctgaactccgacaagcaggctcttcttgcatttgctgcctcactgccacatggcaggaagctcaactggagctctgcagccccagtctgcacttcatgggttggggtgacttgcacaccagacaatagccgcgtgcaaacactacgcctaccagcagtagggctctttggcccgctaccctcagacacgcttggcaagcttgatgccctggaggtattgagccttaggtccaatcgcatcactgttgatctccctcctgaagtaggatccattccttctctccattccctatatcttcagcataataacctatccgggatcataccgacttcccttacttccactttaacatttctagatctgtcatacaacacttttgatggagaaatcccattgagagtgcaaaatctcactcaacttactgcattgcttctccagaatAactctctttctggacccatccctgacctccaactcccaaaattgaggcatttgaatttgagcaacaataacctcagtgggccaataccaccttccttgcaaagattcccagccaattccttcttggggaatgcttttctatgtgggtttcctttacaaccttgccctgggactgcaccttcaccttctccttctccaacatcaccatcacccggcaaggccaagaagggcttctggaaaaggatcagaactggtgttataattgcacttgctgccgcaggaggggtattgttgctaatcttgattgttttactcttgatatgtattttcaagagaaagaaaagcacagaacctactacagcttcttcgtcaaaaggaaaaactgttgctggtggaaggggagaaaatcctaaggaggagtacagcagtggtgttcaggaagctgagaggaataaattggttttctttgagggctgttcatataattttgacctagaggatttgctgagagcttcagctgaagtccttggaaaagggagttacggaactacttataaagctgttcttgaggatggcaccacagttgtggtcaagagattgaaggaggtggtcgtggggaagaaggattttgaacagcagatggagatagttggcagggttggccagcaccagaatgttgtcccattgcgtgcctactattactccaaggatgagaagctactggtgtatgactatatcccatctggtagccttgctgttgttttgcatgggaataaagctactggaaaagctccattggattgggagacgagggtaaagatatctcttggtgtggctcgtggaattgctcatcttcatgctgagggaggcgggaagttcatccatggcaacctcaagtcatcaaacatccttctgtcacagaacctcgacggctgtgtctctgagtttgggctggcacagcttatgaccattccaccagctccagcacgccttgtcggatatcgtgcaccagaagtcctcgagactaaaaagccaacccagaagtctgatgtctacagcttcggtgtgttggtcctcgaaatgctgacaggaaaagcgcctctgagatctcctggacgagaggactccattgagcacttgccaaggtgggtgcagtctgtggtccgggaagaatggaccgcggaggtttttgacgtcgacttgttaaggcatcccaacattgaggatgagatggttcagatgctccaggttgcaatggcatgtgttgccgccccccctgatcaacggccaaaaatggacgaggtgatcaggaggatcgttgagatccggaattcctactccgggtcaagaacaccaccggaggagaagcagaaggatgaatctgcagcgccatga
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| Protein seq | MQDHILTAFLVVSLLFACIPPAKSADLNSDKQALLAFAASLPHGRKLNWSSAAPVCTSWVGVTCTPDNSRVQTLRLPAVGLFGPLPSDTLGKLDALEVLSLRSNRITVDLPPEVGSIPSLHSLYLQHNNLSGIIPTSLTSTLTFLDLSYNTFDGEIPLRVQNLTQLTALLLQNNSLSGPIPDLQLPKLRHLNLSNNNLSGPIPPSLQRFPANSFLGNAFLCGFPLQPCPGTAPSPSPSPTSPSPGKAKKGFWKRIRTGVIIALAAAGGVLLLILIVLLLICIFKRKKSTEPTTASSSKGKTVAGGRGENPKEEYSSGVQEAERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVVGKKDFEQQMEIVGRVGQHQNVVPLRAYYYSKDEKLLVYDYIPSGSLAVVLHGNKATGKAPLDWETRVKISLGVARGIAHLHAEGGGKFIHGNLKSSNILLSQNLDGCVSEFGLAQLMTIPPAPARLVGYRAPEVLETKKPTQKSDVYSFGVLVLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTAEVFDVDLLRHPNIEDEMVQMLQVAMACVAAPPDQRPKMDEVIRRIVEIRNSYSGSRTPPEEKQKDESAAP |
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| Function | Probable inactive receptor kinase At5g58300 [UniProtKB/Swiss-Prot:Q9LVM0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_01g0037360 | OsGoSa_01g0037360.01 | Chr01 | 36173624 | 36176196 | + | NAM | ||
| CDS seq | atgcaagatcatatacttacagcttttctggttgtttctctcctctttgcatgcattcctcctgccaagagtgctgatctgaactccgacaagcaggctcttcttgcatttgctgcctcactgccacatggcaggaagctcaactggagctctgcagccccagtctgcacttcatgggttggggtgacttgcacaccagacaatagccgcgtgcaaacactacgcctaccagcagtagggctctttggcccgctaccctcagacacgcttggcaagcttgatgccctggaggtattgagccttaggtccaatcgcatcactgttgatctccctcctgaagtaggatccattccttctctccattccctatatcttcagcataataacctatccgggatcataccgacttcccttacttccactttaacatttctagatctgtcatacaacacttttgatggagaaatcccattgagagtgcaaaatctcactcaacttactgcattgcttctccagaatAactctctttctggacccatccctgacctccaactcccaaaattgaggcatttgaatttgagcaacaataacctcagtgggccaataccaccttccttgcaaagattcccagccaattccttcttggggaatgcttttctatgtgggtttcctttacaaccttgccctgggactgcaccttcaccttctccttctccaacatcaccatcacccggcaaggccaagaagggcttctggaaaaggatcagaactggtgttataattgcacttgctgccgcaggaggggtattgttgctaatcttgattgttttactcttgatatgtattttcaagagaaagaaaagcacagaacctactacagcttcttcgtcaaaaggaaaaactgttgctggtggaaggggagaaaatcctaaggaggagtacagcagtggtgttcaggaagctgagaggaataaattggttttctttgagggctgttcatataattttgacctagaggatttgctgagagcttcagctgaagtccttggaaaagggagttacggaactacttataaagctgttcttgaggatggcaccacagttgtggtcaagagattgaaggaggtggtcgtggggaagaaggattttgaacagcagatggagatagttggcagggttggccagcaccagaatgttgtcccattgcgtgcctactattactccaaggatgagaagctactggtgtatgactatatcccatctggtagccttgctgttgttttgcatgggaataaagctactggaaaagctccattggattgggagacgagggtaaagatatctcttggtgtggctcgtggaattgctcatcttcatgctgagggaggcgggaagttcatccatggcaacctcaagtcatcaaacatccttctgtcacagaacctcgacggctgtgtctctgagtttgggctggcacagcttatgaccattccaccagctccagcacgccttgtcggatatcgtgcaccagaagtcctcgagactaaaaagccaacccagaagtctgatgtctacagcttcggtgtgttggtcctcgaaatgctgacaggaaaagcgcctctgagatctcctggacgagaggactccattgagcacttgccaaggtgggtgcagtctgtggtccgggaagaatggaccgcggaggtttttgacgtcgacttgttaaggcatcccaacattgaggatgagatggttcagatgctccaggttgcaatggcatgtgttgccgccccccctgatcaacggccaaaaatggacgaggtgatcaggaggatcgttgagatccggaattcctactccgggtcaagaacaccaccggaggagaagcagaaggatgaatctgcagcgccatga
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| Protein seq | MQDHILTAFLVVSLLFACIPPAKSADLNSDKQALLAFAASLPHGRKLNWSSAAPVCTSWVGVTCTPDNSRVQTLRLPAVGLFGPLPSDTLGKLDALEVLSLRSNRITVDLPPEVGSIPSLHSLYLQHNNLSGIIPTSLTSTLTFLDLSYNTFDGEIPLRVQNLTQLTALLLQNNSLSGPIPDLQLPKLRHLNLSNNNLSGPIPPSLQRFPANSFLGNAFLCGFPLQPCPGTAPSPSPSPTSPSPGKAKKGFWKRIRTGVIIALAAAGGVLLLILIVLLLICIFKRKKSTEPTTASSSKGKTVAGGRGENPKEEYSSGVQEAERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVVGKKDFEQQMEIVGRVGQHQNVVPLRAYYYSKDEKLLVYDYIPSGSLAVVLHGNKATGKAPLDWETRVKISLGVARGIAHLHAEGGGKFIHGNLKSSNILLSQNLDGCVSEFGLAQLMTIPPAPARLVGYRAPEVLETKKPTQKSDVYSFGVLVLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTAEVFDVDLLRHPNIEDEMVQMLQVAMACVAAPPDQRPKMDEVIRRIVEIRNSYSGSRTPPEEKQKDESAAP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 15.580070 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0819100 | RBH | 0.0 | 0.0 | 3.965886 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g60330 | RBH | 0.0 | 0.0 | 0.988067 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0819100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0038220 | RBH | 0.0 | 4.958101 | 1.936160 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0037690 | RBH | 0.048661 | 3.252064 | 1.873159 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0038100 | RBH | 0.159419 | 7.981783 | 7.418472 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0037490 | RBH | 0.0 | 0.447787 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0037170 | RBH | 1.420684 | 17.612539 | 13.729387 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0576900 | RBH | 7.4363145 | 4.728193 | 4.7577855 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0036870 | RBH | 0.0 | 0.906580 | 0.896080 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0573200 | RBH | 5.3477585 | 0.9157325 | 19.3181925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0037110 | RBH | 0.0 | 0.217870 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0037130 | RBH | 0.0 | 13.841146 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0020870 | RBH | 1.610868 | 29.055637 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0037430 | RBH | 0.248529 | 1.101354 | 0.910629 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0037190 | RBH | 0.0 | 10.707559 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G037720 | RBH | 0.000000 | 6.005943 | 4.178165 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0037400 | RBH | 0.0 | 16.669046 | 5.050520 |
