Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_01g0019090 | OGI:01059400 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr01:19951920-19955123 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttagtgaaacatgtactccatgtaggtaataaggaaacacaagcggttgttaccaaaatgattgtactttagtagataaattgcaaatacctgaaagtagttgaactcatatttctcgcaccacagcttcagtttagggcaatcagcaataaatgcatggtgaggcttacacatcatactttctgaaggaagaataaggagccgaggacaacgggcaatatataagctcaaaagatcagaaatattttgtagtcccaccaaagtactcaggcacaaacaatctctgatgtcaatagtttggagcTttgatggcacattaccaactgaaaactggagacttatgagggcacaattgcttattactagctttttaagggcaataaaacaaggtactgttcttagtttggtacagtctctgattgtaagtctctgcaatttcgggcaatctgaatactgtattccataccaatcctctagtttgcataatttttcgagttctaactccttcaaggatggaaatattgcctcttggtaccttatgctattatttcttctgtacttaaaagatgcatgatccaaattccggatgtttgatattccaacgagtttaagacattgtaagtagatcaggcttcctagatgtaagggtaagtatgtaaggttactgcatcgcttcagacatagtgtgtccaacatatcaagcttgcaaaattgatccaatgatccatccaaaaactcaaaatatacatgcagacttctcaggctgacaagattttgaaagtttgttgccctcaatgttctcaaattggaaatcaccaatgtctccaggctgtaaagacgagacaccgattcaggcagttcttgcagatagcaatttagagagagataacgcaggtgcttcaaattgccaatcgaacatatcatattggtaacatcttggtttgaattcagcaccaaagccctaagatatacaaaactggataattcagggaagctagcagagaagcaacagtttaataccaaagtctgtagagaccttggttcatgaaaggaaagtatgccactagcttgtgatgcatgaagttggtgaagttcatttggcAaattacatagtgtgccaagcattgccgtacagcgttctctgctagtaaatgactttgcaagatcaaaaATaacatcatgtaacTtaaaatgctgaattgactttgatgatcgctccagatacgtttcaatcagcgattgtttcatataattgtatttccatagttgaaaattatcaatgcgctcagacgaaaatgatttcatggagtccatcggaaatagatttagcgaacgtgtgtaataacttggtctaatattgcgaggtctctgaacattctcatacaagctctcaatcactgatcttcctattaactcatcaaaataatgcgcttcacgcaacaattgccctgatgaagtttcaatcaacgatcttgcatgcagctcatcaaaatactcgttgccaacatcctggcgggttttaccacctgtggagtcaacataaccttgagcaatccacagatcaaccatttcatcttttgtaaagcccaaatatgtagggtacaatgaacagagtaggaaacaaggttttaatcttgttggcaacctgtaataactcaatctaagagctgggaagatgtcatccttctcacctaattcccaaagctcgctttccaatatttccatccaggtgttttcatctgtcttagagcgtaaaaggcagcccactgacttcactgctagtggtaaaccaccacacttatgcaaaattttcttaccaatgtgaactaaactcgattttttatccacacattgcttcccaaaagcataatgctgaaacaatagccagcaatcgtcattaggaatggcagtaaggtaaaatggcttcactgttccagcaagacgtgccacctctttactccttgttgttaccaaaattgtgactgtttgagcatagctgagtggatgtattagatcatgccaggaactttcacattcattccatacatcatcaagcacaaaaaataatttctttccaaccagtttgttgaggaggacctcatgaactaggcttagttgtttgaagctgcagtttctctttgtcaatgactctgctattgcagttgtcagccttaggacatcaaatgttggggagacatgaatccaaccactgtgctcaaaatgttttctaacacggacatcaTtatataccatctgtgctaccgtggtttttccaataccacccattccgacaattggcaaaacaacaattccaggcttcatgctttgggataatactgattccacaatattctccttctcatcaatcctgccaaaaacaagggactcatctagaaggtggctagttggctgagacttcaaccagtcacccctgcctgctattttctggccatcttctgctgtgagttggagagcggctcgatctctggatatctcctcaaatcggtttgttatatcactgattctctgcgaatttattgttgaaaaggtgaataagagtatgaagacacaggatgcataattTCtataaatacgatagtttagctgctaagctttaaatctttaatcccatatggatataagtagtattaaactacagtgaatcaactattttcagcaaaggtaaccccattaactataagaggaaaatagatgcaatgaattaaaagcatgacaagagtacagactaatattcatcagtaacatttcattttgagtaagtcaattaaacatgttattaataaaaaattatgcaccaaataactacatgcatacctcattaataccatcatcatcctcttcatctttatccaagtgcttccgcttgcatggataatcaccttgacgctcttggacttgactctgcagcagctcataccggtaatcatcaaggacatccttggcatcacgagccaagtccttgagctccttaagccacaacttaacatagttgtcctggagcccttgctcctcggcatcatcaagtgtggcctggatgtgtgacagcagtcgcttcagtcgttgcagatcggcagatgcagtgggatgaccactgcggggatataaatctgacaacgggcttcgaagaattgccaacaggctgctagctgatgaaagaagtgatgacactaatccactagccat
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| CDS seq | atggctagtggattagtgtcatcacttctttcatcagctagcagcctgttggcaattcttcgaagcccgttgtcagatttatatccccgcagtggtcatcccactgcatctgccgatctgcaacgactgaagcgactgctgtcacacatccaggccacacttgatgatgccgaggagcaagggctccaggacaactatgttaagttgtggcttaaggagctcaaggacttggctcgtgatgccaaggatgtccttgatgattaccggtatgagctgctgcagagtcaagtccaagagcgtcaaggtgattatccatgcaagcggaagcacttggataaagatgaagaggatgatgatggtattaatgagagaatcagtgatataacaaaccgatttgaggagatatccagagatcgagccgctctccaactcacagcagaagatggccagaaaatagcaggcaggggtgactggttgaagtctcagccaactagccaccttctagatgagtcccttgtttttggcaggattgatgagaaggagaatattgtggaatcagtattatcccaaagcatgaagcctggaattgttgttttgccaattgtcggaatgggtggtattggaaaaaccacggtagcacagatggtatataAtgatgtccgtgttagaaaacattttgagcacagtggttggattcatgtctccccaacatttgatgtcctaaggctgacaactgcaatagcagagtcattgacaaagagaaactgcagcttcaaacaactaagcctagttcatgaggtcctcctcaacaaactggttggaaagaaattattttttgtgcttgatgatgtatggaatgaatgtgaaagttcctggcatgatctaatacatccactcagctatgctcaaacagtcacaattttggtaacaacaaggagtaaagaggtggcacgtcttgctggaacagtgaagccattttaccttactgccattcctaatgacgattgctggctattgtttcagcattatgcttttgggaagcaatgtgtggataaaaaatcgagtttagttcacattggtaagaaaattttgcataagtgtggtggtttaccactagcagtgaagtcagtgggctgccttttacgctctaagacagatgaaaacacctggatggaaatattggaaagcgagctttgggaattaggtgagaaggatgacatcttcccagctcttagattgagttattacaggttgccaacaagattaaaaccttgtttcctactctgttcattgtaccctacatatttgggctttacaaaagatgaaatggttgatctgtggattgctcaaggttatgttgactccacaggtggtaaaacccgccaggatgttggcaacgagtattttgatgagctgcatgcaagatcgttgattgaaacttcatcagggcaattgttgcgtgaagcgcattattttgatgagttaataggaagatcagtgattgagagcttgtatgagaatgttcagagacctcgcaatattagaccaagttattacacacgttcgctaaatctatttccgatggactccatgaaatcattttcgtctgagcgcattgataattttcaactatggaaatacaattatatgaaacaatcgctgattgaaacgtatctggagcgatcatcaaagtcaattcagcattttaAgttacatgatgttATttttgatcttgcaaagtcatttactagcagagaacgctgtacggcaatgcttggcacactatgtaattTgccaaatgaacttcaccaacttcatgcatcacaagctagtggcatactttcctttcatgaaccaaggtctctacagactttggtattaaactgttgcttctctgctagcttccctgaattatccagttttgtatatcttagggctttggtgctgaattcaaaccaagatgttaccaatatgatatgttcgattggcaatttgaagcacctgcgttatctctctctaaattgctatctgcaagaactgcctgaatcggtgtctcgtctttacagcctggagacattggtgatttccaatttgagaacattgagggcaacaaactttcaaaatcttgtcagcctgagaagtctgcatgtatattttgagtttttggatggatcattggatcaattttgcaagcttgatatgttggacacactatgtctgaagcgatgcagtaaccttacatacttacccttacatctaggaagcctgatctacttacaatgtcttaaactcgttggaatatcaaacatccggaatttggatcatgcatcttttaagtacagaagaaataatagcataaggtaccaagaggcaatatttccatccttgaaggagttagaactcgaaaaattatgcaaactagaggattggtatggaatacagtattcagattgcccgaaattgcagagacttacaatcagagactgtaccaaactaagaacagtaccttgttttattgcccttaaaaagctagtaataagcaattgtgccctcataagtctccagttttcagttggtaatgtgccatcaaAgctccaaactattgacatcagagattgtttgtgcctgagtactttggtgggactacaaaatatttctgatcttttgagcttatatattgcccgttgtcctcggctccttattcttccttcagaaagtatgatgtgtaagcctcaccatgcatttattgctgattgccctaaactgaagctgtggtgcgagaaatatgagttcaactactttcaggtatttgcaatttatctactaaagtacaatcattttggtaacaaccgcttgtgtttccttattacctacatggagtacatgtttcactaa
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| Protein seq | MASGLVSSLLSSASSLLAILRSPLSDLYPRSGHPTASADLQRLKRLLSHIQATLDDAEEQGLQDNYVKLWLKELKDLARDAKDVLDDYRYELLQSQVQERQGDYPCKRKHLDKDEEDDDGINERISDITNRFEEISRDRAALQLTAEDGQKIAGRGDWLKSQPTSHLLDESLVFGRIDEKENIVESVLSQSMKPGIVVLPIVGMGGIGKTTVAQMVYNDVRVRKHFEHSGWIHVSPTFDVLRLTTAIAESLTKRNCSFKQLSLVHEVLLNKLVGKKLFFVLDDVWNECESSWHDLIHPLSYAQTVTILVTTRSKEVARLAGTVKPFYLTAIPNDDCWLLFQHYAFGKQCVDKKSSLVHIGKKILHKCGGLPLAVKSVGCLLRSKTDENTWMEILESELWELGEKDDIFPALRLSYYRLPTRLKPCFLLCSLYPTYLGFTKDEMVDLWIAQGYVDSTGGKTRQDVGNEYFDELHARSLIETSSGQLLREAHYFDELIGRSVIESLYENVQRPRNIRPSYYTRSLNLFPMDSMKSFSSERIDNFQLWKYNYMKQSLIETYLERSSKSIQHFKLHDVIFDLAKSFTSRERCTAMLGTLCNLPNELHQLHASQASGILSFHEPRSLQTLVLNCCFSASFPELSSFVYLRALVLNSNQDVTNMICSIGNLKHLRYLSLNCYLQELPESVSRLYSLETLVISNLRTLRATNFQNLVSLRSLHVYFEFLDGSLDQFCKLDMLDTLCLKRCSNLTYLPLHLGSLIYLQCLKLVGISNIRNLDHASFKYRRNNSIRYQEAIFPSLKELELEKLCKLEDWYGIQYSDCPKLQRLTIRDCTKLRTVPCFIALKKLVISNCALISLQFSVGNVPSKLQTIDIRDCLCLSTLVGLQNISDLLSLYIARCPRLLILPSESMMCKPHHAFIADCPKLKLWCEKYEFNYFQVFAIYLLKYNHFGNNRLCFLITYMEYMFH |
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| Function | Putative disease resistance RPP13-like protein 1 [UniProtKB/Swiss-Prot:Q9LRR4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_01g0019090 | OsGoSa_01g0019090.01 | Chr01 | 19951920 | 19955123 | - | NAM | ||
| CDS seq | atggctagtggattagtgtcatcacttctttcatcagctagcagcctgttggcaattcttcgaagcccgttgtcagatttatatccccgcagtggtcatcccactgcatctgccgatctgcaacgactgaagcgactgctgtcacacatccaggccacacttgatgatgccgaggagcaagggctccaggacaactatgttaagttgtggcttaaggagctcaaggacttggctcgtgatgccaaggatgtccttgatgattaccggtatgagctgctgcagagtcaagtccaagagcgtcaaggtgattatccatgcaagcggaagcacttggataaagatgaagaggatgatgatggtattaatgagagaatcagtgatataacaaaccgatttgaggagatatccagagatcgagccgctctccaactcacagcagaagatggccagaaaatagcaggcaggggtgactggttgaagtctcagccaactagccaccttctagatgagtcccttgtttttggcaggattgatgagaaggagaatattgtggaatcagtattatcccaaagcatgaagcctggaattgttgttttgccaattgtcggaatgggtggtattggaaaaaccacggtagcacagatggtatataAtgatgtccgtgttagaaaacattttgagcacagtggttggattcatgtctccccaacatttgatgtcctaaggctgacaactgcaatagcagagtcattgacaaagagaaactgcagcttcaaacaactaagcctagttcatgaggtcctcctcaacaaactggttggaaagaaattattttttgtgcttgatgatgtatggaatgaatgtgaaagttcctggcatgatctaatacatccactcagctatgctcaaacagtcacaattttggtaacaacaaggagtaaagaggtggcacgtcttgctggaacagtgaagccattttaccttactgccattcctaatgacgattgctggctattgtttcagcattatgcttttgggaagcaatgtgtggataaaaaatcgagtttagttcacattggtaagaaaattttgcataagtgtggtggtttaccactagcagtgaagtcagtgggctgccttttacgctctaagacagatgaaaacacctggatggaaatattggaaagcgagctttgggaattaggtgagaaggatgacatcttcccagctcttagattgagttattacaggttgccaacaagattaaaaccttgtttcctactctgttcattgtaccctacatatttgggctttacaaaagatgaaatggttgatctgtggattgctcaaggttatgttgactccacaggtggtaaaacccgccaggatgttggcaacgagtattttgatgagctgcatgcaagatcgttgattgaaacttcatcagggcaattgttgcgtgaagcgcattattttgatgagttaataggaagatcagtgattgagagcttgtatgagaatgttcagagacctcgcaatattagaccaagttattacacacgttcgctaaatctatttccgatggactccatgaaatcattttcgtctgagcgcattgataattttcaactatggaaatacaattatatgaaacaatcgctgattgaaacgtatctggagcgatcatcaaagtcaattcagcattttaAgttacatgatgttATttttgatcttgcaaagtcatttactagcagagaacgctgtacggcaatgcttggcacactatgtaattTgccaaatgaacttcaccaacttcatgcatcacaagctagtggcatactttcctttcatgaaccaaggtctctacagactttggtattaaactgttgcttctctgctagcttccctgaattatccagttttgtatatcttagggctttggtgctgaattcaaaccaagatgttaccaatatgatatgttcgattggcaatttgaagcacctgcgttatctctctctaaattgctatctgcaagaactgcctgaatcggtgtctcgtctttacagcctggagacattggtgatttccaatttgagaacattgagggcaacaaactttcaaaatcttgtcagcctgagaagtctgcatgtatattttgagtttttggatggatcattggatcaattttgcaagcttgatatgttggacacactatgtctgaagcgatgcagtaaccttacatacttacccttacatctaggaagcctgatctacttacaatgtcttaaactcgttggaatatcaaacatccggaatttggatcatgcatcttttaagtacagaagaaataatagcataaggtaccaagaggcaatatttccatccttgaaggagttagaactcgaaaaattatgcaaactagaggattggtatggaatacagtattcagattgcccgaaattgcagagacttacaatcagagactgtaccaaactaagaacagtaccttgttttattgcccttaaaaagctagtaataagcaattgtgccctcataagtctccagttttcagttggtaatgtgccatcaaAgctccaaactattgacatcagagattgtttgtgcctgagtactttggtgggactacaaaatatttctgatcttttgagcttatatattgcccgttgtcctcggctccttattcttccttcagaaagtatgatgtgtaagcctcaccatgcatttattgctgattgccctaaactgaagctgtggtgcgagaaatatgagttcaactactttcaggtatttgcaatttatctactaaagtacaatcattttggtaacaaccgcttgtgtttccttattacctacatggagtacatgtttcactaa
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| Protein seq | MASGLVSSLLSSASSLLAILRSPLSDLYPRSGHPTASADLQRLKRLLSHIQATLDDAEEQGLQDNYVKLWLKELKDLARDAKDVLDDYRYELLQSQVQERQGDYPCKRKHLDKDEEDDDGINERISDITNRFEEISRDRAALQLTAEDGQKIAGRGDWLKSQPTSHLLDESLVFGRIDEKENIVESVLSQSMKPGIVVLPIVGMGGIGKTTVAQMVYNDVRVRKHFEHSGWIHVSPTFDVLRLTTAIAESLTKRNCSFKQLSLVHEVLLNKLVGKKLFFVLDDVWNECESSWHDLIHPLSYAQTVTILVTTRSKEVARLAGTVKPFYLTAIPNDDCWLLFQHYAFGKQCVDKKSSLVHIGKKILHKCGGLPLAVKSVGCLLRSKTDENTWMEILESELWELGEKDDIFPALRLSYYRLPTRLKPCFLLCSLYPTYLGFTKDEMVDLWIAQGYVDSTGGKTRQDVGNEYFDELHARSLIETSSGQLLREAHYFDELIGRSVIESLYENVQRPRNIRPSYYTRSLNLFPMDSMKSFSSERIDNFQLWKYNYMKQSLIETYLERSSKSIQHFKLHDVIFDLAKSFTSRERCTAMLGTLCNLPNELHQLHASQASGILSFHEPRSLQTLVLNCCFSASFPELSSFVYLRALVLNSNQDVTNMICSIGNLKHLRYLSLNCYLQELPESVSRLYSLETLVISNLRTLRATNFQNLVSLRSLHVYFEFLDGSLDQFCKLDMLDTLCLKRCSNLTYLPLHLGSLIYLQCLKLVGISNIRNLDHASFKYRRNNSIRYQEAIFPSLKELELEKLCKLEDWYGIQYSDCPKLQRLTIRDCTKLRTVPCFIALKKLVISNCALISLQFSVGNVPSKLQTIDIRDCLCLSTLVGLQNISDLLSLYIARCPRLLILPSESMMCKPHHAFIADCPKLKLWCEKYEFNYFQVFAIYLLKYNHFGNNRLCFLITYMEYMFH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.659066 | 20.723860 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0520600 | RBH | 2.022076 | 1.839641 | 2.174663 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g33684 | RBH | 1.033710 | 1.033866 | 0.587515 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0520600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0019630 | RBH | 0.948236 | 8.179347 | 4.403718 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0019260 | RBH | 0.283294 | 2.227590 | 1.349819 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0019560 | RBH | 0.360482 | 5.725900 | 4.023305 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0018930 | RBH | 0.109634 | 0.083067 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0018880 | RBH | 2.097100 | 0.0 | 7.645791 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0316800 | RBH | 3.877193 | 3.8850265 | 5.813077 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0018940 | RBH | 0.287744 | 0.085985 | 1.328536 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0315600 | RBH | 3.9912445 | 4.2935535 | 8.832316 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0018910 | RBH | 0.520116 | 0.306477 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0018830 | RBH | 0.786734 | 10.172756 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0018850 | RBH | 0.493381 | 0.450670 | 0.812678 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0018750 | RBH | 0.366910 | 1.616727 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G019230 | RBH | 0.947437 | 2.115757 | 2.740910 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0018940 | RBH | 1.831656 | 10.370763 | 5.778480 |
