Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_01g0001060 | OGI:01002250 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr01:719348-745550 | ||||||||
| Gene Symbol | RLCK4, OsRLCK4, RLCK5, OsRLCK5, RLCK7, OsRLCK7, RLCK13, OsRLCK13, - | ||||||||||
| DNA seq | TCAGACGACGAGACTGTTCATCATGTCATAGTACGAGAAAAGTTGCCTGCTTTGGATGCGAAAAACGATACCATTTCTACAAATTTCTGCACGCATGCATAAAAACATCAAAAGGCGACATCGCAAGTCATCAACATACTGACCACGCTGTTTGTCTGGCTGATCGATTAGTCAAAACCTAACCAGCGCTTGTACTCGTAGTAAGAATTTTTGTTTGTTTGATACTGGAACTAACTGATAGTCAGATTTGCACCATTGACAAATTGGATTACAGCTCCCAGCGATAATCGGCTGTCCTAATCGTCACATTTTCAGCAAAAACAGCTCCATATCTTGTACCATCGCCCAATTtttcatacacaataactatgaaacggtgacatccccatcacaaatttaggacaaatcaaagatttttcagtcaaaagatgacccagttagtcaaggaaggcagctgcctcctgcccccatgcagacttacaacctccagacaaactccagaatgcagactctcaggttgcagtgatccgaatgccacgacaaagcagagagcaaaaaatttaagtactagcactttcagccataattcagtactactttctcatggtagaaaatacaactttatcatatgcaaaaataaatagcataccacaagatcacattttcttgctcctgctttatactctgttattccctaaaacaagataacttccaaatttcaacaatgccaagggaacatatctgtttacaacaatatgtagcctcagcgttttacaacttacttaccacctttcctatttggcatcaaagcacatgcacaagcttcactcatcctcctctgagatttcagttagttcagaggagaaacggcaagaatccactagcaatggcaggggttcatcatcgcagaagaatggccttgaaggcagctgcagaccatcaacatcaccttcaagcatttctatgacctcactcatcgttggacgatcaggaggcttcatttgaatgcaatgtagaccaacaacacacaacttcttttccagctcatgcatattgaaggcattggcaatctcacccatcttttgttgaaccagctgattatacacccaagatggataatatgactggcttgagctcgacatatcctgcttagagttccttcgccctccagccatctccaacagaagcatcccaaagctataaacatcagatttgctagatatgacaccaaagctccgagatatcatctcaggagcaatataacctactgttccttgtgcagcgctaactggcacaaaactgttatcctgtggatacagtttggcgaggccaaaatcggcaacttttgggacgaaattgctatcaagaaggatgttgtgcggcttgatatcaaaatgtagaatctgcatatcacaCccctgatgtaagtagtttattcctctagcaatgcccaatgcgatctcattgagcttgtcccaagagagactcttgtcaggagagaagatgaacctgtcaagagatccatggggcatgtactcatacacaagtgctctcctcatttcctctgcacaataccccactagacgtactacattgacatgatggatactgccaatggtggatacctcgctgatgaattcttctccattacaattgtagttggccagcaTtttgatggcaacatggacatcaccaggcagtatcactcccttgaacacggatccatagccaccctggcccaacttgtctctaaaatggcttgtcattgcaatgatgtctgtataggcgtaccttgttggaccaagcattagctgcattcgtaaaaacttctcaactgcgtcgatttttAttctagttttccaatacttgaaggcaaggaaggtcaatagtgtcaacggagctatcacgaacctgcataaaactgcataaaaaaacaagTttacataaacagtgataacctttagtaaatgtgtctttagacattggaacggtgcagtggtgattatgtactgtataattaagaagacagaatcgcagaagtaccagcaatccacttgaaaacaaacaaagcaaattgtacaatgaatccgccataaaattctatttttccacgaagcatccccatcatgtattgtggcatatcgaaataatctttcatgcccactcctctaattatgcaggaccagaaactaaagtcaataaaaagcatgtccacaatctgatccttgatggtttgattggacaatggttcTtcatgaaatcccctgcaaggccgtgacatggtagagaaaagaatggcttagagagcgtaacaattgttttaagacaaatatgtactcaagtttatgtatgaatgcattctcgAaaaagtgtatgtatgaatgtaatggaacaacacccgaaactcaccgaatcgaccccatcagacaatccttgatgtgcccaatcctactccacctatgtattatgggaaaatgaacagcaaatccattcctcatggatctgacgatgtctgaaaagcttgcattatgtggcaatggcgagtCccaaccacccaagggaatcatggcaaggtagcgacatgaagtctcaaggtttccgatgattggaaaaacagatggaggcattatccaggaaccaaacacataaacaaacgaagagcttgtgctcaggcaatcaacaggaacgtacacactattgttccttactgcctgtgaacaattcacaaagctaacccatgtagctccaggtccagggtcaagggccaggtcccagccgccatgtgatccctggataccccccgaaacgaaaggaagctgatccgagcgaggaagagggcagctgctgtttgtatctttcaggctggcatcaacaacccagaagacagaagtagtgtagttgatgctggttacatagtatgtCcctgtgttgatcctaatggtagccttgctatcgctgcaatctaactcatatgacggaacaccgcacctttgtggatcacctcgccggcggaaaggatgggaaatgttctggagatgtccacaggagaaaggatagcacccttgccgcccctcgacatctcctgcaagagcaagaacagcaaagatgaaaacaaaggcttgcattgtggcagagaggggatgcatgctactcgctcagCccacaaggacaaggttggctaaccaagacaagtgcttatgttggctgctgcatatgatccgtgttccgtgattttgttgactaatccagaccatattgcaattagtcaatattaaattcttccacagtctctgatagagatggggcagggatggaccgaccgaagtatctgatagagtaaagccaaattcgtagtaccaaactttgactaactttcgctacaaaataggagtatatgattgattgaccccccccccctgcccccccccccctgttattgtagcaaccggtgatcatacagccttcctgctctctctattctgtttgcagtcctcttcaccctaattttctatgcacctccggccgttgcagtacacagagagagagagagagagagatgggtactgttctcgcaacagccttcctgctctctgttctcagccatggcacctactacatagccatggcttcttcatcttgggatgaccaagacttcttcaggcattgtccaccatcccggtgcagcgacggtggaccagagatccggttccctcaccggctgcaatccagcaacacaccatcatcatgcgacagttcacacgccaagctaatatgctctggccaggacaccatcctacatcacccatttctgggcccttgcaaggtgactgccatagattacaagaaggctgtcatgaagatcatcctgtttgggggctcatcttctccatgcctgcttcacaagttcaattccacaaatctatcagctgatgtcaacgatcagaatcaattatacctcactgaacctgggagaatagtgcgttgttcaaaagagttcacaacaagtagagcttctatgatcgatggctacaaaactgttattgccgataaagttgtccgcttgatcccctgcctaagcgacaccacaagccacttctcatatttggtgtctacttggctgtacctgtatgcgcttccattggactgcatggtcgtctcaaaaggcaacattccaatCcccagtccatacgctggtttaacgttcaagcaaatggcagaaaggataatcaactctgctgagatcactcttgatttgggtctcgggagcattccctacaattgcgtgcggtgtgaacggcaagggcaacactgcgcattcagctcacaaagaaatcaaacattctgcatgcatcacggtaccattctaacaatacccaccCAcacacatatagctttatttcctacaatagttaagctcttgcatttgatccacccatacagtactaccttttgaaacttctaggagatgagttgcaaaattattttgcaaactagtagtacaaaccatttgaatatgtgactgtaactatttaatcattctttacaattctcatagatatctcaaaaaagaagtggccaatggagaataatgtttgctcaactagcaacaatcagacacaatgattataaatttacatcttctcatagatatgcagctacaatcaacaccattgtactgctaatgaaaaggacccgaaagcaaaagtaacttaacttaagtaacaaaagactcctacagttagaaaatctaaaggttaagtaagcatacaacacaactaatcttacatgttctgatgataatcatgattctgatgtcttgagtacagaagactgcagttgatgatactgtgctgagcttttgcacaatcagatatacacacactaggagaagttatctatcacatatatatttgcataatcaaagtacagttgtaaccccaaaactaaaactctatgatatcccacagggtccatatttttctgcaatgtcgtaggtctat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agctttgatagtgtatactgtagaattgagtggAaaaaaaatgcaaaagttaattaattaccagcaatccacttgacaagacacaaggtgtatattatgaagagcttatggtaaagagaatgatcaacgccgcggatcaagtcgctgatggaaagacgcatgtcgaggtaataccgtctggatatgcctatcatgcatccccagaaacggaggtcaatagaaaggatgtcaatgatcctgcctttgatgcctactctggatctgggtaatgccttgtcatcgctaccagctaagctgcaagaccatttacagcatgcgttggaaagagttaattaaacgggattgaaggagaagaactaaacaaaatcggcccttttcatatgagaaagtaaaggtttcgagattataaggaattaaggcgctcacctaacagactcgttgaggcaatctttgatgagaccataccaagtagtccaaggtcctccatatgtaggaaatttgacggcaaatccacccctcatggattttacaaaatctgcataactagtgtattcggacagattaacgatgtttctgccatcgccgataggagtcatggccaagtatccacaagaaggttcaatgtctttgatagatggtactaaagaagtaccaaaatatgagagcatataataaacgaaggaagaagtcgtggtcaggcaattcacgggctggtatttgctactactgttcgtaattagttcctgcgaacaattgacaaagctaacccacagaatcccattagcaagggccaagttccagctgtcgtgtgatcctcggataccattaaggcaaggcagctggtccgagcgaggaagagggcagctgctgtttgcatcatcctgcaggttggcatccacaacccaaaagatggaagcagtgtagttgatgctactcaaatagtatttccctgtgttgatccgaatggtggccttgccatcgtcatcgctgcagtctagctcgtacgcccagacgccgcacctgcgagggtcgcctcgccggcgaaaaggatacgatacgttttggagatggccgcaggagaaaggttggcactgatgccgtcgtccttggacatggacgacatgatgatttgcatccgctaccacaagtgcgagcacacacaggacggtcgacagagcagctgcttccattgcgttgcatacc
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| CDS seq | atggaagcagctgctctgtcgaccgtcctgtgtgtgctcgcacttgtggtagcggatgcaaatcatcatgtcgtccatgtccaaggacgacggcatcagtgccaacctttctcctgcggccatctccaaaacgtatcgtatccttttcgccggcgaggcgaccctcgcaggtgcggcgtctgggcgtacgagctagactgcagcgatgacgatggcaaggccaccattcggatcaacacagggaaatactatttgagtagcatcaactacactgcttccatcttttgggttgtggatgccaacctgcaggatgatgcaaacagcagctgccctcttcctcgctcggaccagctgccttgccttaatggtatccgaggatcacacgacagctggaacttggcccttgctaatgggattctgtgggttagctttgtcaattgttcgcaggaactaattacgaacagtagtagcaaataccagcccgtgaattgcctgaccacgacttcttccttcgtttattatatgctctcatattttggtacttctttagtaccatctatcaaagacattgaaccttcttgtggatacttggccatgactcctatcggcgatggcagaaacatcgttaatctgtccgaatacactagttatgcagattttgtaaaatccatgaggggtggatttgccgtcaaatttcctacatatggaggaccttggactacttggtatggtctcatcaaagattgcctcaacgagtctgttagcttagctggtagcgatgacaaggcattacccagatccagagtaggcatcaaaggcaggatcattgacatcctttctattgacctccgtttctggggatgcatgataggcatatccagacggtattacctcgacatgcgtctttccatcagcgacttgatccgcggcgttgatcattctctttaccataagctcttcataatatacaccttgtgtcttgtcaagtggattgctgtgctatgcaggtttgtgttcgcaccgttggccgtgatgatttttcttactcgcaagtactggaaaacaaggattgcaattgatgcagtcgagaagttcctccggatgcaagatatgctaggcctcaagaggtacgcctacacggacatcatagcaatcacaagccatttcagagacaagctgggccaaggaggatatgggtctgtgtacaagggtgtgttTctcccgggtggtgttcatgtcgccatcaagatgttggatggcaactccaattgcaacggagaagacttcatcagtgaagttgccaccataggcaggatccatcacatcaacgtggtgcgtcttgtggggttctgctctgaagaaatgagaagagctctggtttatgagtacatgcctagaggatctctaaacaagtacatcttctcatccgagagaagcttctcatgggacaagctcaatgagattgctctgggtattgctagagggatcaactacctgcataaggggtgcgaaatgcagattctacactttgatatcaagccagacaacatccttcttgatgataactttgttccaaaggttgctgatttcggcctcgcaaaactgtacccaagggagaagagctttgtgtcagatagggctttacggggaacagtaggttatatggctcctgagatggtatcccggagctttggcgttatatccgacaaatccgatgtttatagctttggaatgttgttgcttgagatggctggaggtagaaggaatgcagatccaaatgcaaactcaaatgcaagcagggcatactacccagcatgggtgtatgaccagctgatagcagatcaacaagttgatgagatatccaatgttgctgacatgcatgagctggagaggaagctatgccttgttgggctgtggtgcattcagatgaaatcacacgatcgcccgacgatgagcgaggcaatagagatgctcgaaggggatgtggatgcgttgccagtgcctctgagaccatttttctgcgatggggatggcattggcaatggcatgccacctccacaagtcatggattcttactttcactcctccgagcttactgcaatttcagaagaggacgatggaatagctgaatatattagctacactgggagtaaatatgacacgctgcgggatcgatctcttgtgttgaagggaatggagagcaaataccacaactttattgtggtgttcagcaaggatgatttgtggactagcagcaacgatggaataaggaaccaagaacagggtgatccaggatggtgtcttgtccagagcatgataattgcatgccaggtgcgccgcatgaTGGAggttgtgtcgaaagacggaacggatgctgcaggtggccggcggcagcatcggcgccatgactgccctccgttcacatgcggccatctcagtgacgtgtcgttcccgttccgccggcgaggtgacccgccggagtgcgacgacaaggctacaattcagatcgacaaggagacatactctgtaagtgacatcaactatggtgattctaccttgtgggtcgtcgatgccagcttcttggattcacgtagcagttgccttcttcctcgctggaacccccttcttcgtgatcccaggctccaggccaagtcacaccatatcattgaattggcacctccagtaggggttacctgggctagctttgtcaattgttcgcaggaaataaggaacagcagttggatgtacatgcccgtcgcttgcctgagcaccagcagatccttcgtttacgtgtttactggccaacaatctgcttatattcagaaccttgagccttcctgtgggtacctggccacgactcctttgggtggcagcaagttgaacagcacgtcggcgctgcagaatgtaagctatcaggatgttgtaaagctaatgatgactggatttgccgttcgatttcctttcacagttagtgggtggaacttcaaagaatgcctggcactgtcaatccgccagacaggtacagggagcaaggaaaggattgcgaatattgctatcattgacttctatttctggtcgtgcttcctgcttggagatagatcacataataacctcatctacacgtacatggtggtcgacatagccctactgattttgaagtggactgctgtactgtgcagatttgtattggccccattagcagtattcatcttccttgcccacaagtattggagaaataagataacaattgatgcagtagagaagttcctccagatgcaactaactctcggcccaacaaggtatgcctacactgacctcactgcaattacaggtcacttcggtgagaagcttggccaaggaggctacggctcggtatacaaaggtgttctcccaggttatgttaatgtggctgtcaaggtgctggaaaatgccaactgcaacggtgaagagttcatcagtgaggtctccaccattggtaggatccaccacgtcaatgtagttcgtcttgttggtttttgttcagaggaactgaggagggcacttgtgtacgagtacatgccacgaggatctctagacaagtacattttctcatccaagagaagtttctcatgggacaaactcaatgagatagctttgggtattgctagggggatcaactatcttcatcaaggttgcgatatgcagatactgcactttgacatcaagccacacaacatccttcttgatgacaactttgttccaaaggttgctgatttcggcctcgccaaactgtacccaagggacaacagttttgtgccgctcaacgccttaaggggaacaataggttatattgctcctgaaatgatatctcggagctttggcgtaatatcaagcaaatccgatgtctacagctttggaatgctgctgctggagatggctggaggaagaaggaactcagacatgcatgcagagaactcaagtcaggcctactacccgtcgtgggtgtatgaccggctaatagagcaacagatgaagtctcacgatcggccgacgatgagcgaggtcatagagatgcttgaaggtggcgttgttggcctgcagatgcctccaagaccattcttctgtgatgatgaatccatgtcacctatgatgaattcttaccaattctcctctgggctaactgaaatCTtagaggaggatgagtga
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| Protein seq | MEAAALSTVLCVLALVVADANHHVVHVQGRRHQCQPFSCGHLQNVSYPFRRRGDPRRCGVWAYELDCSDDDGKATIRINTGKYYLSSINYTASIFWVVDANLQDDANSSCPLPRSDQLPCLNGIRGSHDSWNLALANGILWVSFVNCSQELITNSSSKYQPVNCLTTTSSFVYYMLSYFGTSLVPSIKDIEPSCGYLAMTPIGDGRNIVNLSEYTSYADFVKSMRGGFAVKFPTYGGPWTTWYGLIKDCLNESVSLAGSDDKALPRSRVGIKGRIIDILSIDLRFWGCMIGISRRYYLDMRLSISDLIRGVDHSLYHKLFIIYTLCLVKWIAVLCRFVFAPLAVMIFLTRKYWKTRIAIDAVEKFLRMQDMLGLKRYAYTDIIAITSHFRDKLGQGGYGSVYKGVFLPGGVHVAIKMLDGNSNCNGEDFISEVATIGRIHHINVVRLVGFCSEEMRRALVYEYMPRGSLNKYIFSSERSFSWDKLNEIALGIARGINYLHKGCEMQILHFDIKPDNILLDDNFVPKVADFGLAKLYPREKSFVSDRALRGTVGYMAPEMVSRSFGVISDKSDVYSFGMLLLEMAGGRRNADPNANSNASRAYYPAWVYDQLIADQQVDEISNVADMHELERKLCLVGLWCIQMKSHDRPTMSEAIEMLEGDVDALPVPLRPFFCDGDGIGNGMPPPQVMDSYFHSSELTAISEEDDGIAEYISYTGSKYDTLRDRSLVLKGMESKYHNFIVVFSKDDLWTSSNDGIRNQEQGDPGWCLVQSMIIACQVRRMMEVVSKDGTDAAGGRRQHRRHDCPPFTCGHLSDVSFPFRRRGDPPECDDKATIQIDKETYSVSDINYGDSTLWVVDASFLDSRSSCLLPRWNPLLRDPRLQAKSHHIIELAPPVGVTWASFVNCSQEIRNSSWMYMPVACLSTSRSFVYVFTGQQSAYIQNLEPSCGYLATTPLGGSKLNSTSALQNVSYQDVVKLMMTGFAVRFPFTVSGWNFKECLALSIRQTGTGSKERIANIAIIDFYFWSCFLLGDRSHNNLIYTYMVVDIALLILKWTAVLCRFVLAPLAVFIFLAHKYWRNKITIDAVEKFLQMQLTLGPTRYAYTDLTAITGHFGEKLGQGGYGSVYKGVLPGYVNVAVKVLENANCNGEEFISEVSTIGRIHHVNVVRLVGFCSEELRRALVYEYMPRGSLDKYIFSSKRSFSWDKLNEIALGIARGINYLHQGCDMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDNSFVPLNALRGTIGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNSDMHAENSSQAYYPSWVYDRLIEQQMKSHDRPTMSEVIEMLEGGVVGLQMPPRPFFCDDESMSPMMNSYQFSSGLTEILEEDE |
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| Function | Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_01g0001060 | OsGoSa_01g0001060.02 | Chr01 | 719348 | 735474 | - | NAM | ||
| CDS seq | atgctgaagctggaaattttaactgtaaacaatgcaggtgggcggcggcatcatcagattcagcttcagcctgcgtgtcctacgttcacctgtggcgcccatctcaggaacgcgtcgtacccgttccgccggcgaggtgacccgccggagtgcggcgttgcgtcgtacgagctgacttgcaccgatgacaaggctattattcagatcgacaacggaacgtaccttgtgaggggaatcaactacaccgatgctaccttcagtgtcgtggacgccaacatgttggattcaagtaacagttgccctcttcctcgctggaatcgcACtccttaccgaaggtacggggttgtcgaagactcaagccgcaacatcgtccaagagctgatgccatcttattcgaccataaccgctgcttttgtgacttgttcgcgggaagtaacgaacaatgggatgtacagtcctgtcgcttgcctaagcaacagcagctcattcgtttacgtgctaactggctggttcgctaattatatcaagagtctcgagccttcttgtgggtacctggccatgactcctgtggcgagtgcctggctacatccgaatgcaagctatgcggatgtcgtcaaactaatgagaggtggattcgccattcagtttcctgacacaattagtctgtactccagtttcaaagagtgcatggcagagttacttcaagacatccgtgacggtgaccaacccaagtctagtgaacgcaaccagtataggattgagctagtttcgttaattgaatatggtatcttgcaaTgtgcaactcaaggctctagaccaactagagctgtgatggctatccaattgttcattcgcagaacaccaattgccgtttggactttgaagtgtattgctgtatcctgcaggttcattttgccgcccttagtagtattgacctttctggtgcacaagtattggaagaggaggatgataatcgatgcagtcgagaagtttctccggatgcaactgatgattggtccgacgaggtatgcctacactgacatcactgcaatcacagggcatttcagggagaagctcggccaaggaggctatggctctgtatataaaggtgttctactcccaggcaatgtccatgtggctgtcaaggtgctgggaaactccaattgtaatggagaagagttcatcagtgaagtctccaccattggcaggattcaccatgtcaatgtggttcgtttagtagggttttgtgcagaggaaatgaggagggcactggtgtacgagcacatgcctaatggatctctcgacaagttcatcttttcacatgacatgagattctcctgggacaagctcaacgagatcgcattgggcattgccagaggaataaactatttgcatcaggggtgtgagatgcagattctacattttgatatcaagccgcacaacatccttcttgacagcaatttcattccaaaagttgctgattttggccttgccaaactgtacccacgggataatagttttgtgcctgttagcgctgcacgaggaacaataggttatattgctcctgagatgatatctcggagctttggtgccatatctagcaaatctgacgtgtatagctttggaatgcttctgttggagatggttggagggcgaaggaactctaagcaggatatgtcgagctcaagccaagcgtattatccatcatgggtgtataatcagctggttcaacaagagttgggtgagatggtcactgcctttaatatgcatgagttggaaaagaagttgtgcattgttgggctacattgcattcagatgaagtctcatgatcggccaacaatgagtgaggtcattgagatgcttgacggtggtgctgatggtctgcgattgccttctaggccattcttctgtgatgacgagcctatgccacatttggagatgtcgaggggcggcaagggtgctatcctttctcctgtggacatctccagaacatttcccatcctttccgccggcgaggtgatccacaaagattgcagcgatagcaaggctaccattaggatcaacacaggGacatactatgtaaccagcatcaactacactacttctgtcttctgggttgttgatgccagcctgaaagatacaaacagcagctgccctcttcctcgctcggatcagcttcctttcgtttcggggggtatccagggatcacatggcggctgggacctggcccttgaccctggacctggagctacatgggttagctttgtgaattgttcacaggcagtaaggaacaatagtgtgtacgttcctgttgattgcctgagcacaagctcttcgtttgtttatgtgtttggttcctggataatgcctccatctgtttttccaatcatcggaaaccttgagacttcatgtcgctaccttgccatgattcccttgggtggttggGactcgccattgccacataatgcaagcttttcagacatcgtcagatccatgaggaatggatttgctgttcattttcccataatacataggtggagtaggattgggcacatcaaggattgtctgatggggtcgattcggggatttcatgaAgaaccattgtccaatcaaaccatcaaggatcagattgtggacatgctttttattgactttagtttctggtcctgcataattagaggagtgggcatgaaagattatttcgatatgccacaatacatgatggggatgcttcgtggaaaaatagaattttatggcggattcattgtacaatttgctttgttcgtgatagctccgttgacactattgaccttccttgccttcaagtattggaaaactagaaTaaaaatcgacgcagttgagaagtttttacgaatgcagctaatgcttggtccaacaaggtacgcctatacagacatcattgcaatgacaagccattttagagacaagttgggccagggtggctatggatccgtgttcaagggagtgatactgcctggtgatgtccatgttgccatcaaaAtgctggccaactacaattgtaatggagaagaattcatcagcgaggtatccaccattggcagtatccatcatgtcaatgtagtacgtctagtggggtattgtgcagaggaaatgaggagagcacttgtgtatgagtacatgccccatggatctcttgacaggttcatcttctctcctgacaagagtctctcttgggacaagctcaatgagatcgcattgggcattgctagaggaataaactacttacatcagggGtgtgatatgcagattctacattttgatatcaagccgcacaacatccttcttgatagcaatttcgtcccaaaagttgccgattttggcctcgccaaactgtatccacaggataacagttttgtgccagttagcgctgcacaaggaacagtaggttatattgctcctgagatgatatctcggagctttggtgtcatatctagcaaatctgatgtttatagctttgggatgcttctgttggagatggctggagggcgaaggaactctaagcaggatatgtcgagctcaagccagtcatattatccatcttgggtgtataatcagctggttcaacaaaagatgggtgagattgccaatgccttcaatatgcatgagctggaaaagaagttgtgtgttgttggtctacattgcattcaaatgaagcctcctgatcgtccaacgatgagtgaggtcatagaaatgcttgaaggtgatgttgatggtctgcagctgccttcaaggccattcttctgcgatgatgaacccctgccattgctagtggattcttgccgtttctcctctgaactaactgaaatctcagaggaggatgaGCAACTTTTCTCGTACTATGACATGATGAACAGTCTCGTCGTCTGA
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| Protein seq | MLKLEILTVNNAGGRRHHQIQLQPACPTFTCGAHLRNASYPFRRRGDPPECGVASYELTCTDDKAIIQIDNGTYLVRGINYTDATFSVVDANMLDSSNSCPLPRWNRTPYRRYGVVEDSSRNIVQELMPSYSTITAAFVTCSREVTNNGMYSPVACLSNSSSFVYVLTGWFANYIKSLEPSCGYLAMTPVASAWLHPNASYADVVKLMRGGFAIQFPDTISLYSSFKECMAELLQDIRDGDQPKSSERNQYRIELVSLIEYGILQCATQGSRPTRAVMAIQLFIRRTPIAVWTLKCIAVSCRFILPPLVVLTFLVHKYWKRRMIIDAVEKFLRMQLMIGPTRYAYTDITAITGHFREKLGQGGYGSVYKGVLLPGNVHVAVKVLGNSNCNGEEFISEVSTIGRIHHVNVVRLVGFCAEEMRRALVYEHMPNGSLDKFIFSHDMRFSWDKLNEIALGIARGINYLHQGCEMQILHFDIKPHNILLDSNFIPKVADFGLAKLYPRDNSFVPVSAARGTIGYIAPEMISRSFGAISSKSDVYSFGMLLLEMVGGRRNSKQDMSSSSQAYYPSWVYNQLVQQELGEMVTAFNMHELEKKLCIVGLHCIQMKSHDRPTMSEVIEMLDGGADGLRLPSRPFFCDDEPMPHLEMSRGGKGAILSPVDISRTFPILSAGEVIHKDCSDSKATIRINTGTYYVTSINYTTSVFWVVDASLKDTNSSCPLPRSDQLPFVSGGIQGSHGGWDLALDPGPGATWVSFVNCSQAVRNNSVYVPVDCLSTSSSFVYVFGSWIMPPSVFPIIGNLETSCRYLAMIPLGGWDSPLPHNASFSDIVRSMRNGFAVHFPIIHRWSRIGHIKDCLMGSIRGFHEEPLSNQTIKDQIVDMLFIDFSFWSCIIRGVGMKDYFDMPQYMMGMLRGKIEFYGGFIVQFALFVIAPLTLLTFLAFKYWKTRIKIDAVEKFLRMQLMLGPTRYAYTDIIAMTSHFRDKLGQGGYGSVFKGVILPGDVHVAIKMLANYNCNGEEFISEVSTIGSIHHVNVVRLVGYCAEEMRRALVYEYMPHGSLDRFIFSPDKSLSWDKLNEIALGIARGINYLHQGCDMQILHFDIKPHNILLDSNFVPKVADFGLAKLYPQDNSFVPVSAAQGTVGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNSKQDMSSSSQSYYPSWVYNQLVQQKMGEIANAFNMHELEKKLCVVGLHCIQMKPPDRPTMSEVIEMLEGDVDGLQLPSRPFFCDDEPLPLLVDSCRFSSELTEISEEDEQLFSYYDMMNSLVV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_01g0001060 | OsGoSa_01g0001060.01 | Chr01 | 735326 | 745550 | - | NAM | ||
| CDS seq | atggaagcagctgctctgtcgaccgtcctgtgtgtgctcgcacttgtggtagcggatgcaaatcatcatgtcgtccatgtccaaggacgacggcatcagtgccaacctttctcctgcggccatctccaaaacgtatcgtatccttttcgccggcgaggcgaccctcgcaggtgcggcgtctgggcgtacgagctagactgcagcgatgacgatggcaaggccaccattcggatcaacacagggaaatactatttgagtagcatcaactacactgcttccatcttttgggttgtggatgccaacctgcaggatgatgcaaacagcagctgccctcttcctcgctcggaccagctgccttgccttaatggtatccgaggatcacacgacagctggaacttggcccttgctaatgggattctgtgggttagctttgtcaattgttcgcaggaactaattacgaacagtagtagcaaataccagcccgtgaattgcctgaccacgacttcttccttcgtttattatatgctctcatattttggtacttctttagtaccatctatcaaagacattgaaccttcttgtggatacttggccatgactcctatcggcgatggcagaaacatcgttaatctgtccgaatacactagttatgcagattttgtaaaatccatgaggggtggatttgccgtcaaatttcctacatatggaggaccttggactacttggtatggtctcatcaaagattgcctcaacgagtctgttagcttagctggtagcgatgacaaggcattacccagatccagagtaggcatcaaaggcaggatcattgacatcctttctattgacctccgtttctggggatgcatgataggcatatccagacggtattacctcgacatgcgtctttccatcagcgacttgatccgcggcgttgatcattctctttaccataagctcttcataatatacaccttgtgtcttgtcaagtggattgctgtgctatgcaggtttgtgttcgcaccgttggccgtgatgatttttcttactcgcaagtactggaaaacaaggattgcaattgatgcagtcgagaagttcctccggatgcaagatatgctaggcctcaagaggtacgcctacacggacatcatagcaatcacaagccatttcagagacaagctgggccaaggaggatatgggtctgtgtacaagggtgtgttTctcccgggtggtgttcatgtcgccatcaagatgttggatggcaactccaattgcaacggagaagacttcatcagtgaagttgccaccataggcaggatccatcacatcaacgtggtgcgtcttgtggggttctgctctgaagaaatgagaagagctctggtttatgagtacatgcctagaggatctctaaacaagtacatcttctcatccgagagaagcttctcatgggacaagctcaatgagattgctctgggtattgctagagggatcaactacctgcataaggggtgcgaaatgcagattctacactttgatatcaagccagacaacatccttcttgatgataactttgttccaaaggttgctgatttcggcctcgcaaaactgtacccaagggagaagagctttgtgtcagatagggctttacggggaacagtaggttatatggctcctgagatggtatcccggagctttggcgttatatccgacaaatccgatgtttatagctttggaatgttgttgcttgagatggctggaggtagaaggaatgcagatccaaatgcaaactcaaatgcaagcagggcatactacccagcatgggtgtatgaccagctgatagcagatcaacaagttgatgagatatccaatgttgctgacatgcatgagctggagaggaagctatgccttgttgggctgtggtgcattcagatgaaatcacacgatcgcccgacgatgagcgaggcaatagagatgctcgaaggggatgtggatgcgttgccagtgcctctgagaccatttttctgcgatggggatggcattggcaatggcatgccacctccacaagtcatggattcttactttcactcctccgagcttactgcaatttcagaagaggacgatggaatagctgaatatattagctacactgggagtaaatatgacacgctgcgggatcgatctcttgtgttgaagggaatggagagcaaataccacaactttattgtggtgttcagcaaggatgatttgtggactagcagcaacgatggaataaggaaccaagaacagggtgatccaggatggtgtcttgtccagagcatgataattgcatgccaggtgcgccgcatgaTGGAggttgtgtcgaaagacggaacggatgctgcaggtggccggcggcagcatcggcgccatgactgccctccgttcacatgcggccatctcagtgacgtgtcgttcccgttccgccggcgaggtgacccgccggagtgcgacgacaaggctacaattcagatcgacaaggagacatactctgtaagtgacatcaactatggtgattctaccttgtgggtcgtcgatgccagcttcttggattcacgtagcagttgccttcttcctcgctggaacccccttcttcgtgatcccaggctccaggccaagtcacaccatatcattgaattggcacctccagtaggggttacctgggctagctttgtcaattgttcgcaggaaataaggaacagcagttggatgtacatgcccgtcgcttgcctgagcaccagcagatccttcgtttacgtgtttactggccaacaatctgcttatattcagaaccttgagccttcctgtgggtacctggccacgactcctttgggtggcagcaagttgaacagcacgtcggcgctgcagaatgtaagctatcaggatgttgtaaagctaatgatgactggatttgccgttcgatttcctttcacagttagtgggtggaacttcaaagaatgcctggcactgtcaatccgccagacaggtacagggagcaaggaaaggattgcgaatattgctatcattgacttctatttctggtcgtgcttcctgcttggagatagatcacataataacctcatctacacgtacatggtggtcgacatagccctactgattttgaagtggactgctgtactgtgcagatttgtattggccccattagcagtattcatcttccttgcccacaagtattggagaaataagataacaattgatgcagtagagaagttcctccagatgcaactaactctcggcccaacaaggtatgcctacactgacctcactgcaattacaggtcacttcggtgagaagcttggccaaggaggctacggctcggtatacaaaggtgttctcccaggttatgttaatgtggctgtcaaggtgctggaaaatgccaactgcaacggtgaagagttcatcagtgaggtctccaccattggtaggatccaccacgtcaatgtagttcgtcttgttggtttttgttcagaggaactgaggagggcacttgtgtacgagtacatgccacgaggatctctagacaagtacattttctcatccaagagaagtttctcatgggacaaactcaatgagatagctttgggtattgctagggggatcaactatcttcatcaaggttgcgatatgcagatactgcactttgacatcaagccacacaacatccttcttgatgacaactttgttccaaaggttgctgatttcggcctcgccaaactgtacccaagggacaacagttttgtgccgctcaacgccttaaggggaacaataggttatattgctcctgaaatgatatctcggagctttggcgtaatatcaagcaaatccgatgtctacagctttggaatgctgctgctggagatggctggaggaagaaggaactcagacatgcatgcagagaactcaagtcaggcctactacccgtcgtgggtgtatgaccggctaatagagcaacagatgaagtctcacgatcggccgacgatgagcgaggtcatagagatgcttgaaggtggcgttgttggcctgcagatgcctccaagaccattcttctgtgatgatgaatccatgtcacctatgatgaattcttaccaattctcctctgggctaactgaaatCTtagaggaggatgagtga
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| Protein seq | MEAAALSTVLCVLALVVADANHHVVHVQGRRHQCQPFSCGHLQNVSYPFRRRGDPRRCGVWAYELDCSDDDGKATIRINTGKYYLSSINYTASIFWVVDANLQDDANSSCPLPRSDQLPCLNGIRGSHDSWNLALANGILWVSFVNCSQELITNSSSKYQPVNCLTTTSSFVYYMLSYFGTSLVPSIKDIEPSCGYLAMTPIGDGRNIVNLSEYTSYADFVKSMRGGFAVKFPTYGGPWTTWYGLIKDCLNESVSLAGSDDKALPRSRVGIKGRIIDILSIDLRFWGCMIGISRRYYLDMRLSISDLIRGVDHSLYHKLFIIYTLCLVKWIAVLCRFVFAPLAVMIFLTRKYWKTRIAIDAVEKFLRMQDMLGLKRYAYTDIIAITSHFRDKLGQGGYGSVYKGVFLPGGVHVAIKMLDGNSNCNGEDFISEVATIGRIHHINVVRLVGFCSEEMRRALVYEYMPRGSLNKYIFSSERSFSWDKLNEIALGIARGINYLHKGCEMQILHFDIKPDNILLDDNFVPKVADFGLAKLYPREKSFVSDRALRGTVGYMAPEMVSRSFGVISDKSDVYSFGMLLLEMAGGRRNADPNANSNASRAYYPAWVYDQLIADQQVDEISNVADMHELERKLCLVGLWCIQMKSHDRPTMSEAIEMLEGDVDALPVPLRPFFCDGDGIGNGMPPPQVMDSYFHSSELTAISEEDDGIAEYISYTGSKYDTLRDRSLVLKGMESKYHNFIVVFSKDDLWTSSNDGIRNQEQGDPGWCLVQSMIIACQVRRMMEVVSKDGTDAAGGRRQHRRHDCPPFTCGHLSDVSFPFRRRGDPPECDDKATIQIDKETYSVSDINYGDSTLWVVDASFLDSRSSCLLPRWNPLLRDPRLQAKSHHIIELAPPVGVTWASFVNCSQEIRNSSWMYMPVACLSTSRSFVYVFTGQQSAYIQNLEPSCGYLATTPLGGSKLNSTSALQNVSYQDVVKLMMTGFAVRFPFTVSGWNFKECLALSIRQTGTGSKERIANIAIIDFYFWSCFLLGDRSHNNLIYTYMVVDIALLILKWTAVLCRFVLAPLAVFIFLAHKYWRNKITIDAVEKFLQMQLTLGPTRYAYTDLTAITGHFGEKLGQGGYGSVYKGVLPGYVNVAVKVLENANCNGEEFISEVSTIGRIHHVNVVRLVGFCSEELRRALVYEYMPRGSLDKYIFSSKRSFSWDKLNEIALGIARGINYLHQGCDMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDNSFVPLNALRGTIGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNSDMHAENSSQAYYPSWVYDRLIEQQMKSHDRPTMSEVIEMLEGGVVGLQMPPRPFFCDDESMSPMMNSYQFSSGLTEILEEDE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.753116 | 7.529719 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0116200 | SBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g02390 | SBH | 0.292234 | 0.000000 | 0.306125 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0114100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0001210 | SBH | 0.048626 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0001210 | RBH | 0.124482 | 1.042061 | 1.236594 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0001230 | SBH | 0.875923 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001110 | SBH | 0.051644 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0001240 | SBH | 11.364197 | 1.983415 | 9.245715 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0013300 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0001080 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0014000 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0001110 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001130 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0001130 | SBH | 0.287462 | 2.850632 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0001250 | SBH | 0.333055 | 0.141762 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0001160 | SBH | 0.084394 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G001110 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0001160 | SBH | 0.000000 | 0.000000 | 0.000000 |
