Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_12g0012880 | OGI:12046440 | 12/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr12:17344720-17345097 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcacttgaaaatcatcacaagcacgccaataaaacaaagaactagcaggcctatgttgatcatcactaaaacttgaatccaatttatcaacttatccatctttccatcatcaaccgacctcagcttcatctctacaggagcagcaaccatatgctccaatgcaacatcactgggagcttcatcaactgcatgtagactcaatccttcaaccatcttcttgtaacattcgatccacttgaaaaacttgcaagaatttggcacctagtaacaaatgcacattagtaacaaagaccaaaagacaccaaatgcaacaaatggaatactcacatcttgttcgttttcctcacatttgaagaaaacctttccaccatgcctcat |
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| CDS seq | atgaggcatggtggaaaggttttcttcaaatgtgaggaaaacgaacaagatgtgccaaattcttgcaagtttttcaagtggatcgaatgttacaagaagatggttgaaggattgagtctacatgcagttgatgaagctcccagtgatgttgcattggagcatatggttgctgctcctgtagagatgaagctgaggtcggttgatgatggaaagatggataagttgataaattggattcaagttttagtgatgatcaacataggcctgctagttctttgttttattggcgtgcttgtgatgattttcaagtga |
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| Protein seq | MRHGGKVFFKCEENEQDVPNSCKFFKWIECYKKMVEGLSLHAVDEAPSDVALEHMVAAPVEMKLRSVDDGKMDKLINWIQVLVMINIGLLVLCFIGVLVMIFK |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_12g0012880 | OsCMeo_12g0012880.01 | Chr12 | 17344720 | 17345097 | - | NAM | ||
| CDS seq | atgaggcatggtggaaaggttttcttcaaatgtgaggaaaacgaacaagatgtgccaaattcttgcaagtttttcaagtggatcgaatgttacaagaagatggttgaaggattgagtctacatgcagttgatgaagctcccagtgatgttgcattggagcatatggttgctgctcctgtagagatgaagctgaggtcggttgatgatggaaagatggataagttgataaattggattcaagttttagtgatgatcaacataggcctgctagttctttgttttattggcgtgcttgtgatgattttcaagtga
More
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| Protein seq | MRHGGKVFFKCEENEQDVPNSCKFFKWIECYKKMVEGLSLHAVDEAPSDVALEHMVAAPVEMKLRSVDDGKMDKLINWIQVLVMINIGLLVLCFIGVLVMIFK |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g28168 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0012830 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0008740 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0008600 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0012370 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0235000 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0012560 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0256700 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0012370 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0012730 | RBH | 2.887943 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0012590 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0012540 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G012510 | RBH | 0.000000 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0008370 | RBH | 0.0 | 0.0 | 0.0 |
