Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsCMeo_11g0024200 OGI:11011560 | 3/16 CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) Chr11:28237960-28242548
Gene Symbol -
DNA seq

atggagttggccggggacgcatccggcgctgccatcaagtccctcctgaccaagctaggaagccttctcgcgcaggagtacgcactgatcagtggcgtccgcggcgacgtccagttcatcaacgacgagctggccagcatgctggccttcctcagcaacctccagcacagcaacgaaggccacgacgagcagacggaggactggatgaagcaggtccgcgaggtcgcctacgacatcgaggactgcatcgacgacttcacccacagcctcgaccccgaccgccgcggcgacgactgctggtccaaattgctcagggccctgtatgagatccggacatgttggcctcgacgcaacattgctgcaaagatcgctcaactcaaagagcgagcgcgtgatgtgggtgaacggcggggcaggtatggcgtctccaatccagtaccagcaggcaaggggattaagaacaccatgactatggttggacatggacatggacattaccctgctgaccatcaagaggtagcccgtcggctcgtcagcattgacaagcctgtgggagtgagtgacatgcacagccttgagacatggatcacctctgatgagaacaagaaactgggcgtgctgtccatcttcgggttcggcggcgtcgggaagacaactgccgccatggcgctctaccgaagctgcggggttaaatttatgcgccgtgcaatggtcaccgtatctcatagcaccgaccctgatgaagtcctcaaggacatactgaagcaactcaaggagagtaccatgaaacaccaaggccccataaatagcacgggatcatcaagtgcctcccagaagaagaatctggttgctactgctgcagcagctccaagaaggatgatgagcgaattacagagcctcttccaagacaggcagcaggaggttatctcatcagtaaatatcagttctcaggagaagattcatggagcaccagttccgcaaagcatgatgaatttcttccacaagcatatgggcaacttattaagcacaattaggctttgttcgtgcggtcaacatgaagacggcagggtcgccaaggaacacgaagccataaaaatggagctgcgggataaactagaaaaagataggtaagtattttactacctttaggtacataaatacaacgaattagctcataaaaatgtccagattcttccaatttggggcgtccattaccataaagaggtgtctaatttgattcacagtgatatgtacaaaccccaaactaaagcttctttaatgtttaaatgtgcgtaaccattgtaggaaacacaattggattaattaatgtcagtgctacatgtaggtggagaactgagtaaagagggcaaaccatttttacttacatccgagtaaaacccaattttcgttacaataaaaggcaatggatattctaattagatagttggatatacgaatttcagcaacatttggatcactagagtttctctatttgtatatgagagaactgtgtgaacggatttttctttgctcaaaagttactttttttttaaagatgatggataattgttacatttccagacactacaataagtgcacacaacctgatactaaagagaaaacaagagggatgggataaaccaccctcccgtaaaggtcggaaggtcatgcagattcatacgctttaagaaaaataatttgatcagatatgtacttattgaggaaagacagactggattgttcatgtaagatattgaaatttgcttttattaatgatgtacctgttggttctgatcatgtttttttcctcatattcttttgtaggtacttactgttaattgatgatgtctggtcggcatctacctggcagatgatctggaactgcttgccgacaaatgacgaaggcagcagagttattgtgacaacacgatttgcagctgtcgcaaacacaccacttgttgagtatcaccatcagcataaaatgcaacttctatctgagcaggaggcagagaagctgttcaacaaaagtttatccgagtgcggggttactgaaggcagtcagccaacacagaaggatcaaataccatccagagtgtgggagatgtgcggtggcctgccattgcccatagttaccatggctggtctggtggcatccaagccacttacacagaaaaatgaatggactgaagtctgcaattctttgtttccaagatcacaagtatgccaaaaaccagaggagttcatgagaataatcaattactgctacaacgttttgcccagtgatctcaagacttgctctttatatctatgcatatttcccaagggtggcaagatttcaaggaagcggctgataaggcgatggatagcggaaggttttgtcagtgagaggcaggggttgagtgtggaggatatcgcggagacatgcttcaaccagcttgttgaaaggaagataatacgggcagtagaacacagcagtgatggaagggtgaagagctgtcaagtccatgacatggtgcttgagttcatcatatccaaggcaagtgaagagaacttcgtcactgtagttggtggccagtggtctatgcctacgcgtagcagcaaagtccgcaggctatccgtccacagcgctgactccaagcacgtcaaggaagcagatcgcatgaacctttcccatgttcgatcactgacagtgtttgggagcctggaccatctgcatctcaagtccttcaaggctgggattgtgcaagtactagatcttgagcgatgcacgggctttaaagcaaagcatgacaatgtgtcggacatatgtgaaatgacactactcaagttcctgagcctccggcgaacggatgtgagagagctgccctccaacattgggagtctcaagtacctggaaactctggatgtaagagagaccaaggttcgtgtgctgcctgcatctgtaggtcagctggaacgaatcagtaacatacttggcggagataaagggacaagggaggccctgaaggtgcccagggagatcaagaggacagcgaaaaccctgcgtgtcttgtcggggattgagattggcaacgaatcgtcgattgctgcatctgacatcagctattttactggtctcaggaagctggccatttacaaactctacaagactactgatcagatgttcaaggatctactctcctctatccagtacctcagtggatattacctccaaactcttgtcattgacgacgactcatcagacttttttaacaccctcaacgacatgtctcgtccaacggacctgagatctcttgagctgtctggcaggttacttaagctgccagaatgggtcccgtttctcaataatcttattaagctaaccctttcggcgacggttctccggccagataacttggagctccttagcagactgcggatattgttttccctcaccttttcaatctgcaaaaccaaacatgatcctggtatagcatccattcttgaaaagaacacgtctgactacagaggcgagatctttgttccagctggagggtttgttaatcttaagctgcttcgcatctttataccgctacttccatcactcaacttttcagaaggggcaatgccggccctggaaaggcttgaactgcatttcaggaggttggaaggtctcaatggcatggccaaacttcaaagtatccatgatgtgatcataacagttgatggcaaagcaggaggtgttaccgagtccatactaggcgatctaaaacgaccacaaagtaaatacgccctaaacattaacgaattgtatgattgactgaaatgccaacatcctagtgttattctccagaagcttggttcgcaggacatggtggttgtggtgtttcaacatttggagaaggtggtcagggagtattttataaaggaacatgggtgacgatttactcttagaattgatggtacttaatatgtcatgtaaacttttacttttgatcttcgcgaatgtgtgtgtggttgtatgcatcgtagctatgctgatgtaattgattgagaccaatgccaggtagcatttggtacaagagtgagacggaggttactccgtagaagaaagtagttttgcaataaagcttccattatcccaaaaattgccaacatcccagggtgattgccgatcctacaaaaatcctccgacctttgtcgcaattacccctggcgtggccctatggaaacccagccgcggcgggcggcaacgacttgggcgatggcaggtgcaaagggcggattccggtgactcagataattagattgatcgggtgcatgcggtgtgcggtctgcgtagcatgaactggccgcatggctaacgtgcggctcctgcattttaggatcagagtgttccataaatagcttagtctttgcattttattgtaagcacacagtgataatcaagtaacagagaacacccaaaaaattgccccaaatcctctttgagtctttcctgttcttcatattcttccgatttgcagcttgtcggttttgctgtagtgcgcatgagaggtgttcaatcgagttcctcgcaacaacctttggctcttgtcttcttttggtag

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CDS seq

atggagttggccggggacgcatccggcgctgccatcaagtccctcctgaccaagctaggaagccttctcgcgcaggagtacgcactgatcagtggcgtccgcggcgacgtccagttcatcaacgacgagctggccagcatgctggccttcctcagcaacctccagcacagcaacgaaggccacgacgagcagacggaggactggatgaagcaggtccgcgaggtcgcctacgacatcgaggactgcatcgacgacttcacccacagcctcgaccccgaccgccgcggcgacgactgctggtccaaattgctcagggccctgtatgagatccggacatgttggcctcgacgcaacattgctgcaaagatcgctcaactcaaagagcgagcgcgtgatgtgggtgaacggcggggcaggtatggcgtctccaatccagtaccagcaggcaaggggattaagaacaccatgactatggttggacatggacatggacattaccctgctgaccatcaagaggtagcccgtcggctcgtcagcattgacaagcctgtgggagtgagtgacatgcacagccttgagacatggatcacctctgatgagaacaagaaactgggcgtgctgtccatcttcgggttcggcggcgtcgggaagacaactgccgccatggcgctctaccgaagctgcggggttaaatttatgcgccgtgcaatggtcaccgtatctcatagcaccgaccctgatgaagtcctcaaggacatactgaagcaactcaaggagagtaccatgaaacaccaaggccccataaatagcacgggatcatcaagtgcctcccagaagaagaatctggttgctactgctgcagcagctccaagaaggatgatgagcgaattacagagcctcttccaagacaggcagcaggaggttatctcatcagtaaatatcagttctcaggagaagattcatggagcaccagttccgcaaagcatgatgaatttcttccacaagcatatgggcaacttattaagcacaattaggctttgttcgtgcggtcaacatgaagacggcagggtcgccaaggaacacgaagccataaaaatggagctgcgggataaactagaaaaagataggtacttactgttaattgatgatgtctggtcggcatctacctggcagatgatctggaactgcttgccgacaaatgacgaaggcagcagagttattgtgacaacacgatttgcagctgtcgcaaacacaccacttgttgagtatcaccatcagcataaaatgcaacttctatctgagcaggaggcagagaagctgttcaacaaaagtttatccgagtgcggggttactgaaggcagtcagccaacacagaaggatcaaataccatccagagtgtgggagatgtgcggtggcctgccattgcccatagttaccatggctggtctggtggcatccaagccacttacacagaaaaatgaatggactgaagtctgcaattctttgtttccaagatcacaagtatgccaaaaaccagaggagttcatgagaataatcaattactgctacaacgttttgcccagtgatctcaagacttgctctttatatctatgcatatttcccaagggtggcaagatttcaaggaagcggctgataaggcgatggatagcggaaggttttgtcagtgagaggcaggggttgagtgtggaggatatcgcggagacatgcttcaaccagcttgttgaaaggaagataatacgggcagtagaacacagcagtgatggaagggtgaagagctgtcaagtccatgacatggtgcttgagttcatcatatccaaggcaagtgaagagaacttcgtcactgtagttggtggccagtggtctatgcctacgcgtagcagcaaagtccgcaggctatccgtccacagcgctgactccaagcacgtcaaggaagcagatcgcatgaacctttcccatgttcgatcactgacagtgtttgggagcctggaccatctgcatctcaagtccttcaaggctgggattgtgcaagtactagatcttgagcgatgcacgggctttaaagcaaagcatgacaatgtgtcggacatatgtgaaatgacactactcaagttcctgagcctccggcgaacggatgtgagagagctgccctccaacattgggagtctcaagtacctggaaactctggatgtaagagagaccaaggttcgtgtgctgcctgcatctgtaggtcagctggaacgaatcagtaacatacttggcggagataaagggacaagggaggccctgaaggtgcccagggagatcaagaggacagcgaaaaccctgcgtgtcttgtcggggattgagattggcaacgaatcgtcgattgctgcatctgacatcagctattttactggtctcaggaagctggccatttacaaactctacaagactactgatcagatgttcaaggatctactctcctctatccagtacctcagtggatattacctccaaactcttgtcattgacgacgactcatcagacttttttaacaccctcaacgacatgtctcgtccaacggacctgagatctcttgagctgtctggcaggttacttaagctgccagaatgggtcccgtttctcaataatcttattaagctaaccctttcggcgacggttctccggccagataacttggagctccttagcagactgcggatattgttttccctcaccttttcaatctgcaaaaccaaacatgatcctggtatagcatccattcttgaaaagaacacgtctgactacagaggcgagatctttgttccagctggaggggtgattgccgatcctacaaaaatcctccgacctttgtcgcaattacccctggcgtggccctatggaaacccagccgcggcgggcggcaacgacttgggcgatggcaggtgcaaagggcggattccgcttgtcggttttgctgtagtgcgcatgagaggtgttcaatcgagttcctcgcaacaacctttggctcttgtcttcttttggtag

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Protein seq

MELAGDASGAAIKSLLTKLGSLLAQEYALISGVRGDVQFINDELASMLAFLSNLQHSNEGHDEQTEDWMKQVREVAYDIEDCIDDFTHSLDPDRRGDDCWSKLLRALYEIRTCWPRRNIAAKIAQLKERARDVGERRGRYGVSNPVPAGKGIKNTMTMVGHGHGHYPADHQEVARRLVSIDKPVGVSDMHSLETWITSDENKKLGVLSIFGFGGVGKTTAAMALYRSCGVKFMRRAMVTVSHSTDPDEVLKDILKQLKESTMKHQGPINSTGSSSASQKKNLVATAAAAPRRMMSELQSLFQDRQQEVISSVNISSQEKIHGAPVPQSMMNFFHKHMGNLLSTIRLCSCGQHEDGRVAKEHEAIKMELRDKLEKDRYLLLIDDVWSASTWQMIWNCLPTNDEGSRVIVTTRFAAVANTPLVEYHHQHKMQLLSEQEAEKLFNKSLSECGVTEGSQPTQKDQIPSRVWEMCGGLPLPIVTMAGLVASKPLTQKNEWTEVCNSLFPRSQVCQKPEEFMRIINYCYNVLPSDLKTCSLYLCIFPKGGKISRKRLIRRWIAEGFVSERQGLSVEDIAETCFNQLVERKIIRAVEHSSDGRVKSCQVHDMVLEFIISKASEENFVTVVGGQWSMPTRSSKVRRLSVHSADSKHVKEADRMNLSHVRSLTVFGSLDHLHLKSFKAGIVQVLDLERCTGFKAKHDNVSDICEMTLLKFLSLRRTDVRELPSNIGSLKYLETLDVRETKVRVLPASVGQLERISNILGGDKGTREALKVPREIKRTAKTLRVLSGIEIGNESSIAASDISYFTGLRKLAIYKLYKTTDQMFKDLLSSIQYLSGYYLQTLVIDDDSSDFFNTLNDMSRPTDLRSLELSGRLLKLPEWVPFLNNLIKLTLSATVLRPDNLELLSRLRILFSLTFSICKTKHDPGIASILEKNTSDYRGEIFVPAGGVIADPTKILRPLSQLPLAWPYGNPAAAGGNDLGDGRCKGRIPLVGFAVVRMRGVQSSSSQQPLALVFFW

Function Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsCMeo_11g0024200 OsCMeo_11g0024200.01 Chr11 28237960 28242548 + NAM
CDS seq

atggagttggccggggacgcatccggcgctgccatcaagtccctcctgaccaagctaggaagccttctcgcgcaggagtacgcactgatcagtggcgtccgcggcgacgtccagttcatcaacgacgagctggccagcatgctggccttcctcagcaacctccagcacagcaacgaaggccacgacgagcagacggaggactggatgaagcaggtccgcgaggtcgcctacgacatcgaggactgcatcgacgacttcacccacagcctcgaccccgaccgccgcggcgacgactgctggtccaaattgctcagggccctgtatgagatccggacatgttggcctcgacgcaacattgctgcaaagatcgctcaactcaaagagcgagcgcgtgatgtgggtgaacggcggggcaggtatggcgtctccaatccagtaccagcaggcaaggggattaagaacaccatgactatggttggacatggacatggacattaccctgctgaccatcaagaggtagcccgtcggctcgtcagcattgacaagcctgtgggagtgagtgacatgcacagccttgagacatggatcacctctgatgagaacaagaaactgggcgtgctgtccatcttcgggttcggcggcgtcgggaagacaactgccgccatggcgctctaccgaagctgcggggttaaatttatgcgccgtgcaatggtcaccgtatctcatagcaccgaccctgatgaagtcctcaaggacatactgaagcaactcaaggagagtaccatgaaacaccaaggccccataaatagcacgggatcatcaagtgcctcccagaagaagaatctggttgctactgctgcagcagctccaagaaggatgatgagcgaattacagagcctcttccaagacaggcagcaggaggttatctcatcagtaaatatcagttctcaggagaagattcatggagcaccagttccgcaaagcatgatgaatttcttccacaagcatatgggcaacttattaagcacaattaggctttgttcgtgcggtcaacatgaagacggcagggtcgccaaggaacacgaagccataaaaatggagctgcgggataaactagaaaaagataggtacttactgttaattgatgatgtctggtcggcatctacctggcagatgatctggaactgcttgccgacaaatgacgaaggcagcagagttattgtgacaacacgatttgcagctgtcgcaaacacaccacttgttgagtatcaccatcagcataaaatgcaacttctatctgagcaggaggcagagaagctgttcaacaaaagtttatccgagtgcggggttactgaaggcagtcagccaacacagaaggatcaaataccatccagagtgtgggagatgtgcggtggcctgccattgcccatagttaccatggctggtctggtggcatccaagccacttacacagaaaaatgaatggactgaagtctgcaattctttgtttccaagatcacaagtatgccaaaaaccagaggagttcatgagaataatcaattactgctacaacgttttgcccagtgatctcaagacttgctctttatatctatgcatatttcccaagggtggcaagatttcaaggaagcggctgataaggcgatggatagcggaaggttttgtcagtgagaggcaggggttgagtgtggaggatatcgcggagacatgcttcaaccagcttgttgaaaggaagataatacgggcagtagaacacagcagtgatggaagggtgaagagctgtcaagtccatgacatggtgcttgagttcatcatatccaaggcaagtgaagagaacttcgtcactgtagttggtggccagtggtctatgcctacgcgtagcagcaaagtccgcaggctatccgtccacagcgctgactccaagcacgtcaaggaagcagatcgcatgaacctttcccatgttcgatcactgacagtgtttgggagcctggaccatctgcatctcaagtccttcaaggctgggattgtgcaagtactagatcttgagcgatgcacgggctttaaagcaaagcatgacaatgtgtcggacatatgtgaaatgacactactcaagttcctgagcctccggcgaacggatgtgagagagctgccctccaacattgggagtctcaagtacctggaaactctggatgtaagagagaccaaggttcgtgtgctgcctgcatctgtaggtcagctggaacgaatcagtaacatacttggcggagataaagggacaagggaggccctgaaggtgcccagggagatcaagaggacagcgaaaaccctgcgtgtcttgtcggggattgagattggcaacgaatcgtcgattgctgcatctgacatcagctattttactggtctcaggaagctggccatttacaaactctacaagactactgatcagatgttcaaggatctactctcctctatccagtacctcagtggatattacctccaaactcttgtcattgacgacgactcatcagacttttttaacaccctcaacgacatgtctcgtccaacggacctgagatctcttgagctgtctggcaggttacttaagctgccagaatgggtcccgtttctcaataatcttattaagctaaccctttcggcgacggttctccggccagataacttggagctccttagcagactgcggatattgttttccctcaccttttcaatctgcaaaaccaaacatgatcctggtatagcatccattcttgaaaagaacacgtctgactacagaggcgagatctttgttccagctggaggggtgattgccgatcctacaaaaatcctccgacctttgtcgcaattacccctggcgtggccctatggaaacccagccgcggcgggcggcaacgacttgggcgatggcaggtgcaaagggcggattccgcttgtcggttttgctgtagtgcgcatgagaggtgttcaatcgagttcctcgcaacaacctttggctcttgtcttcttttggtag

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Protein seq

MELAGDASGAAIKSLLTKLGSLLAQEYALISGVRGDVQFINDELASMLAFLSNLQHSNEGHDEQTEDWMKQVREVAYDIEDCIDDFTHSLDPDRRGDDCWSKLLRALYEIRTCWPRRNIAAKIAQLKERARDVGERRGRYGVSNPVPAGKGIKNTMTMVGHGHGHYPADHQEVARRLVSIDKPVGVSDMHSLETWITSDENKKLGVLSIFGFGGVGKTTAAMALYRSCGVKFMRRAMVTVSHSTDPDEVLKDILKQLKESTMKHQGPINSTGSSSASQKKNLVATAAAAPRRMMSELQSLFQDRQQEVISSVNISSQEKIHGAPVPQSMMNFFHKHMGNLLSTIRLCSCGQHEDGRVAKEHEAIKMELRDKLEKDRYLLLIDDVWSASTWQMIWNCLPTNDEGSRVIVTTRFAAVANTPLVEYHHQHKMQLLSEQEAEKLFNKSLSECGVTEGSQPTQKDQIPSRVWEMCGGLPLPIVTMAGLVASKPLTQKNEWTEVCNSLFPRSQVCQKPEEFMRIINYCYNVLPSDLKTCSLYLCIFPKGGKISRKRLIRRWIAEGFVSERQGLSVEDIAETCFNQLVERKIIRAVEHSSDGRVKSCQVHDMVLEFIISKASEENFVTVVGGQWSMPTRSSKVRRLSVHSADSKHVKEADRMNLSHVRSLTVFGSLDHLHLKSFKAGIVQVLDLERCTGFKAKHDNVSDICEMTLLKFLSLRRTDVRELPSNIGSLKYLETLDVRETKVRVLPASVGQLERISNILGGDKGTREALKVPREIKRTAKTLRVLSGIEIGNESSIAASDISYFTGLRKLAIYKLYKTTDQMFKDLLSSIQYLSGYYLQTLVIDDDSSDFFNTLNDMSRPTDLRSLELSGRLLKLPEWVPFLNNLIKLTLSATVLRPDNLELLSRLRILFSLTFSICKTKHDPGIASILEKNTSDYRGEIFVPAGGVIADPTKILRPLSQLPLAWPYGNPAAAGGNDLGDGRCKGRIPLVGFAVVRMRGVQSSSSQQPLALVFFW

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.731448 0.216504

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0687900 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g47447 SBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os11g0687900 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0024500 SBH 0.093249 0.333760 0.555009
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0022030 SBH 0.121768 1.749102 1.113316
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0023960 RBH 0.074051 0.000000 2.288172
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0013610 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0024310 SBH 8.393654 11.443207 12.636646
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0442800 SBH 0.1823615 17.883915 0.2926015
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0024620 SBH 0.175664 0.000000 1.120198
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0438900 SBH 1.2510465 2.3554675 4.747685
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0024840 RBH 0.090633 0.205190 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0024950 RBH 0.537206 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0023860 SBH 3.115633 4.969689 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0023770 SBH 0.237856 0.0 0.151067
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0024140 SBH 0.323227 4.796237 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G024150 SBH 0.672735 2.039785 0.923535
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0024370 SBH 0.000000 1.067520 0.955904
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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