Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_11g0014340 | OGI:11051240 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr11:16911319-16915059 | ||||||||
| Gene Symbol | WRKY72, OsWRKY72, WRKY-72 | ||||||||||
| DNA seq | tagcacgcacgcacaggaagccgcccttcaatcaatttcgatagtcaaagtgaaaaaaaaagaagaaaagaagaggacagaaaagtattaagtagagggtttatttagcttgcttactaatccctatataaccctggttgtaacttgtgaaactctttcagtctcttcgaattctcaatctctctcatcagctcgatctatccaactgagctattctcgcttatcgagctcgatcgatcgcttggtcgagatggagaacttcccgatactctttgcgacgcagccgacgtcgtcttctacctccagctcctaccacttcatgagctcctcttccggcagccatgaccaccgccaccaccatggactacaggcaggcggcaacggcggtggcggtggtggaagcttgagccatggcttgttcatggggtcgtcgtcgtcgtcaattaggatggaggagctctccaactccaagcaggccggcgacgtcgtcgtcgacggtggtgcaacgaggagcccacacggcggcgacggagacggagctgcgggcgacgacggcggcgatgcgcaggcagccgccgccggagggaggaagaagggggagaagaaggagcggcggccgcggttcgcgttccagacgcgcagccaggtcgacatcctcgacgacggctaccggtggaggaagtacggccagaaggccgtcaagaacaacaaattcccaaggtttgtcattcatgtcatgtacatccatccatggattaattctccaaataatgatcattttagtcaattacacctctcttcttctttcttatctttcttatcttttatctcttctctgattgcataatcaattggatagagatcacaattgattgatcttgaattaactattaggcaagctaattaattataagctagatttctttttcttgatcggtctttgatgtttgattttgggatgtttgctgggtattatgatctttttcgaggattgcttttttttattggtttggagtgtatgtaatccgatccgatgcttttttcactaggggttaagagaaagtaggtgagatggagtcccaatgaatcttccaagctctgctagtggtttgcttacatgtgataatgacatatctcatcctcatcatctagatgaaaaagactaatagtttcacatgattttggtgggcatcgatccattcaataaatagagaaccgatggcgatcgactttgaccagcaataacttggatgaccatccaccgttgtttctattatctattaaatccgtatgtgtattatcctaattcagtcaccatctttatatgctccctagagaacaaagttaaacgtgtaaagctcactgtgagcttccaagctcgaaacgatgggtaggtcgtacgtagtttgctctggtttatgaccataattagttagttaatggtcctagcataaaatgttactacaatggtcttactaacacctgaaagagtattaaatatttcctatatgatttataaattacacaattaatgaaatagaatctgcaaggtttatatatccaagaaaattgcttaatgtttctgctctttaattgacacggatatggcactggtcatcggtcatttcttgtgattaaaattggttgcctaaatatattagtgagatctttatcattccaagaaatttgccttatcctttttgttgtaacacgaaaggttttaattctgtgacacccttctaccttttcttctcttttctgaaaaatcttggaaactctgtcaagttgcaccaaaaacagcaaagacgtgcacaaatatactcttccacatataaatagcagtgctccgcactttgacatcattcttttcagcagctatatttggtaccaatttgtactggacacttcccattagttgtattcattttttcgtatcttggggaatgtccaacaacttttttttttaacttttgactggcggtgtatttgtgcaaaaactgtagatatatcatttgttaaatctaaaaaataattgtgcttcctacaaaatgattgtccaacgggaaaaaaaaggttcattttaaaatgttttgcctcttatttaaaatacttaaatattttgaataatttaacaggcaaacaggtaataaacctgtttgaacacctatcaactatacactagttataaaatttagctatcaatcttgtgggcctaacgtaaattaaattataattcgatatttatctggatcatgttcaagctcaaaagattattgaatactaaatcataaaagcaattataatttatttaaattagagagttatgaaaggttaggtccatgcacagttgcaagaccaattatctgtcccgatccctaaaataatatcccgtttatttcataatcaaccattttgtcctcaccataatagatttggttattaaacaatcactgtagtcttgtaattaggaaaattgcaggtgtaaattgtggaaaaaaaaaggcaattgaattgactagttatctaaaaaggttctatctagctggcctccatctctctttaggaaagaagtgcactatatatacaaacaaatcaagaagtcaattaaacaagattcaatcgatgaagatttggagaattatatatatatggtttgtaaacttagctcatcatttttttttgagaaacaaatccttcaaactacagctggaaattaaatccatgtgtagacgcaatgcacaatagttagtacatagacgaccaccggttaatagcttgcaacatcttattaaatatgtatgtaagatgaatataacaccaactgtgtggtgtgaagtcgtggcatgtatgaattcatacaccagggttcaattatgatacctactaattttacacacgtgcatgcatatgcgattttagtagaactttagtgggaccagggatttgccaccgatctctatgtctttgagcgtgtgctagagggcgcactacctaggaatgtggtatgcatcttccgcgtagtaatgaaaaaaaatatttgctgtctaatttctttctcgatgaatttgtatttcatcggtgcacgaatctaaaattaattaatgaatgaatgaatggatgcaggagctactaccggtgcacgcaccaagggtgcaacgtgaagaagcaggtgcagcggctgtcgcgggacgagacggtggtggtgacgacgtacgagggcacgcacacgcaccccatcgagaaatccaacgataacttcgagcacatcctcacccagatgcacatctactccggcctcaccccttcatcggctgcgcatgcctcatcctcctcacctctcttcccttcagctgctgctgctgcttcccacatgttccagtagctttagcaaatttgatcatacacaacaaattagttacacgtacatatatgatcaatgccaatgccacactgtacatatgcagtgcatgcatggatcgatggatgttagcaggaaaaattaagaggctatgttaatttgtacattaaacttagatgaggtgcagtgtaagagaaaactagctagtgaattaataagcatatgcatgatcgatcgagattcagtggcaagcaagattcggtcacgcatgcagttctttttaattgttttacttttttttgtcaactgtaggccagatgtactagtgattgcacaacttttacaaagaaatttattcacaagatcttgcacattttggttct
More
|
||||||||||
| CDS seq | atggagaacttcccgatactctttgcgacgcagccgacgtcgtcttctacctccagctcctaccacttcatgagctcctcttccggcagccatgaccaccgccaccaccatggactacaggcaggcggcaacggcggtggcggtggtggaagcttgagccatggcttgttcatggggtcgtcgtcgtcgtcaattaggatggaggagctctccaactccaagcaggccggcgacgtcgtcgtcgacggtggtgcaacgaggagcccacacggcggcgacggagacggagctgcgggcgacgacggcggcgatgcgcaggcagccgccgccggagggaggaagaagggggagaagaaggagcggcggccgcggttcgcgttccagacgcgcagccaggtcgacatcctcgacgacggctaccggtggaggaagtacggccagaaggccgtcaagaacaacaaattcccaaggagctactaccggtgcacgcaccaagggtgcaacgtgaagaagcaggtgcagcggctgtcgcgggacgagacggtggtggtgacgacgtacgagggcacgcacacgcaccccatcgagaaatccaacgataacttcgagcacatcctcacccagatgcacatctactccggcctcaccccttcatcggctgcgcatgcctcatcctcctcacctctcttcccttcagctgctgctgctgcttcccacatgttccagtag
More
|
||||||||||
| Protein seq | MENFPILFATQPTSSSTSSSYHFMSSSSGSHDHRHHHGLQAGGNGGGGGGSLSHGLFMGSSSSSIRMEELSNSKQAGDVVVDGGATRSPHGGDGDGAAGDDGGDAQAAAAGGRKKGEKKERRPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSRDETVVVTTYEGTHTHPIEKSNDNFEHILTQMHIYSGLTPSSAAHASSSSPLFPSAAAAASHMFQ |
||||||||||
| Function | Probable WRKY transcription factor 75 [UniProtKB/Swiss-Prot:Q9FYA2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0014340 | OsCMeo_11g0014340.01 | Chr11 | 16911319 | 16915059 | + | NAM | ||
| CDS seq | atggagaacttcccgatactctttgcgacgcagccgacgtcgtcttctacctccagctcctaccacttcatgagctcctcttccggcagccatgaccaccgccaccaccatggactacaggcaggcggcaacggcggtggcggtggtggaagcttgagccatggcttgttcatggggtcgtcgtcgtcgtcaattaggatggaggagctctccaactccaagcaggccggcgacgtcgtcgtcgacggtggtgcaacgaggagcccacacggcggcgacggagacggagctgcgggcgacgacggcggcgatgcgcaggcagccgccgccggagggaggaagaagggggagaagaaggagcggcggccgcggttcgcgttccagacgcgcagccaggtcgacatcctcgacgacggctaccggtggaggaagtacggccagaaggccgtcaagaacaacaaattcccaaggagctactaccggtgcacgcaccaagggtgcaacgtgaagaagcaggtgcagcggctgtcgcgggacgagacggtggtggtgacgacgtacgagggcacgcacacgcaccccatcgagaaatccaacgataacttcgagcacatcctcacccagatgcacatctactccggcctcaccccttcatcggctgcgcatgcctcatcctcctcacctctcttcccttcagctgctgctgctgcttcccacatgttccagtag
More
|
|||||||
| Protein seq | MENFPILFATQPTSSSTSSSYHFMSSSSGSHDHRHHHGLQAGGNGGGGGGSLSHGLFMGSSSSSIRMEELSNSKQAGDVVVDGGATRSPHGGDGDGAAGDDGGDAQAAAAGGRKKGEKKERRPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSRDETVVVTTYEGTHTHPIEKSNDNFEHILTQMHIYSGLTPSSAAHASSSSPLFPSAAAAASHMFQ
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.627431 | 1.250758 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0490900 | RBH | 1.845463 | 0.639801 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g29870 | RBH | 1.094212 | 0.377293 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0490900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0014400 | RBH | 0.291597 | 0.000000 | 0.573760 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0014390 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0014130 | RBH | 0.053299 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0014410 | RBH | 0.0 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0269300 | RBH | 1.7896135 | 5.3278715 | 1.7962245 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0014640 | RBH | 0.186828 | 0.247690 | 0.095317 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0282400 | RBH | 4.889898 | 15.055002 | 0.008428 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0014550 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0014540 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0014180 | RBH | 1.824732 | 7.854715 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0014010 | RBH | 0.070193 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0014280 | RBH | 0.0 | 0.970966 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G014090 | RBH | 0.0 | 0.681720 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0014300 | RBH | 0.363618 | 0.000000 | 0.0 |
