Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_11g0012860 | OGI:11043030 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr11:14537779-14542110 | ||||||||
| Gene Symbol | WNK6, OsWNK6 | ||||||||||
| DNA seq | tcaggaaggaaggtcattgaacttgacactgttgccagggattcccttacaaagaaggtaaaaaatgatacttctaaccagcatatgtttgatgctacgcaatctataacaacctctctaagtatgcaattatgatttcacttagaattttaggagtaatgctcactatctgttctcatattagtgtcatttatgttcaaaattcaactgactatatatgttaagacattttaaattgtttttggaataattatctaaaagaatggaaatatgattgtgctatgaatatgcaacacccaaaacaacaaaaagaagtaaaactaaattctatggaggaaaaaaatgtaagtaatgcaactaaatgcaaccctagaaaaaaaaatccgacaacccagaattcaaagataaaaaatgtaaaactcgttgttttctaaagatagttattgtagtcatcgtctttcaaatgattatgattcaagtgcacacacaacttttccaaatgaaggccagggatgtggtgagcgggaaaaaaccattggacgaattcatagacccccgtgttagagacgaggttaacattgaagatttcgtgttgatattgaaaattgcggtcctctgcgtggcgcattcaagtgtagggcgtccaacaataaaggatgtttttgaggagatggacaaagcattgacgaatacagattcaaaggttagaattacattgtttcttttgatgaactttcttaaacagactgtgaatatattaatttacttgtcattttatttaatgctgcctctaattctgctgatcaggttggcagagcgagagaagagataaacccatccagtacaatccagtatcagtatgcaacggggcttaacatagtatagtgtacatttccagaagttacaaacagtttcttgcatggagtttcagttgaatggaatttccaaggctgcactttgaaattggactgtaagaaagataagagagctatgccaaactagtattgtacttgcaacggtgttggccctgcaactagtggttgcttatgggtgatgtaagtatatatatatatatatatatatatatgtacatgagcaagttaagaacctagataaaatagtactagatccattattaaatagtacttgataggattgactgaaatatcagtattatgaaagtacttgaaacttataaatattttctcaacaataaacttacaaatatttaaaactctacactattatgaaagcacgatgcaaacatatgagttttacgattcaggatatgattaaaactggatccctacttgagatgaacttgtttgctttttcttgggacgacgtttagttgtgtttttttttgtgtaagttcccaacttctccttatttgttttccgctcgcacgcttcccaaaccgctaaacggagtattttttttaaaaaagagttttctataaaaaagttgctttaaaaattatactaatttattttcaagtatttttagctaataatacatactccgtccataaaaaaaccaacctccgactattctaggttggctttttttttttaatggagagagtaataattaattactccgtatgtgctaaaccagtacgtctttttgcgtatcctccgaatagtttttcaaagaaaaagtacacccaaggtccctcaacttgtcatcgaattaaaaaatcgtcccccaaccacaaaaccagatatataatatcccttgacttacaaaaacattcactttaaatccttaggtagttttaaacccggttttatccgatgtggtgactgagtcagcatgggacccatatgggccccacgtgtcagtacgccacgtcactctttcccctctctcccttcctcatctctctctcacttttatcctctctggtatggtggccgcccggcgggtggagaggaggtcgccgggcgagacgagggaggaaatccgacggccgacgacgtggcggtggcggcggtgacgcgggagaaagggagggccgcggcagcggcgcccgccggcacgccgccatgtcctccccccgcgggccgccgtctcgtccgtcccacccaaaccttgtcgatcccttcgcatggtgatcgtcgatgcaagcaggctggtgcaggtagttgtacatcaaattgtagtaggcaacgccaacactgccatggccatcgccgtcgccggagaagaagccatcgtcttcgagcggcagcaggaacgggtcgtcgagcagctcgcgccgtcggggcgaggcaccgttcaatgaattgcctcatcaccgggtcgctcaccctgtacaacgcagcaggcttgatcccctgatcataaacaagcattttcttgatcaaatcgtgtccaagaattcacgagaaattctgcaagaatcgaatagatggtgatcactgatcagatcgtacggagatgactcgcttgtagatttggatggggttggagcactcgctgtaggggtaatcgagggtgaccatctcgaggacgcacatgccgaaggagtagacgtcggcgagctcgtcgtaggactcctcgtacacctcgggagccatgaactccggcgtgcctacgcagcgagtgtggtcgccgccgccgccggcggcggagaggcggaacgcagcgaggccgaggtcgccgatcttgacctccctctggttgccgttgacgaagatgttgtcgcacttgaggtcgcggtggatggtgggcggcgagtgtgcgtggaggtaggcgagcccgtcgaggatctgtgcgcaccagcgccgcaccgccgccacgctcacccgccggtgcttctccctgtactgacggagcgtgccggagacgaagagctcgatgacgaagttgagggcgccgcgtggcgcgtcgacccagtaggccagtaggcgtcgaggcacctcgactccgccgccattgcgcggctgccctgcttcgtgctcccgccccgccgcggaggtagtgcggcggcggcagcggcggcggagtgcgcggtgtgcctgcgcgccgtcgaggaaggggagacggtgcgcgcgctcgcctgcggacgacgtgccccctgtgccgcgccgacgtgccggtgccggcgaggccgacgagctcgacgacggtgaaggggaagcagcaggaaaccgcggacggcgccttcctcctcatacaccctcgccgccagcctctcccgcgccgtcgcagccggaggagccgccccctacccgccaccgccgccgccggagaggccacccccgccgccaacgccgacgacgaggcccgcgccctcctccctcgcgctcggagccgccgccgacgacaaggccgagcggcgcggagtcgtcggcgccgcctctccgccaccgctctctcccgccgacgccgcaccggtctcgcccgccgacgcggcgcctccgcagcggtgctcgccttgtcgcccagtcgcccagagaagataagagaagagtgagagagaggagaaaaggagaggggagagggtgatgacgtgcccagctaacacgtggggtccacgtgggtcccacgctgagaccaaaaccgggtcaaacccaccgaaggatctcgggtgaccggttttgtatagttaagggaccccgtatatctggttttacggttgggggagggacgattttgtaatttaatgacaagttgagggaccttcggtgtactttttccgttttccaacggtcctaatggcccacatatgagatcttggatgggcccgatttgaaatcccacggagaaagtcaggccggcccaaacggcccacgaatccccccagctttagccgagctgacctcctcctccttcccttatccagatcaacccgagccaaacccaaacgccatctccaccgtcgcctcgcctcgcctccacctccacctccactaccaccaccgtctccggcgatggaggccgccgaccccaggtgattcggcggccggtctcctccccgccaccgccgccgccgccgccaatggcgtgcctcgcgccgcacttcaagtgggcgccctgcccccacgcgcaccaccaccactctacttcttctttaccgtcgtcgtcgtcttcgtccacctcggccccttcctcgtcgtcgaggtgctccttctcccgcgggggccccttccgcgtccactgcgcggtcaccgccaccacctccgccgcggcgcccgtcgtcgtagaagctcccggcggggggatgcggctcgcgtacgccgccgccccggactcctccgcgccggctctccaggtgacttgcctcctccactcggttggttgattgggatatcgtatcggattggg
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| CDS seq | atggctcccgaggtgtacgaggagtcctacgacgagctcgccgacgtctactccttcggcatgtgcgtcctcgagatggtcaccctcgattacccctacagcgagtgctccaaccccatccaaatctacaagcgagtcatctccgggatcaagcctgctgcgttgtacagggtgagcgacccggtgatgaggcaattcattgaacggtgcctcgccccgacggcgcgagctgctcgacgacccgttcctgctgccgctcgaagacgatggcttcttctccggcgacggcgatggccatggcagtgttggcgttgcctactacaatttgatggaatccctggcaacagtgtcaagttcaatgaccttccttcctga |
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| Protein seq | MAPEVYEESYDELADVYSFGMCVLEMVTLDYPYSECSNPIQIYKRVISGIKPAALYRVSDPVMRQFIERCLAPTARAARRPVPAAARRRWLLLRRRRWPWQCWRCLLQFDGIPGNSVKFNDLPS |
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| Function | Probable serine/threonine-protein kinase WNK3 [UniProtKB/Swiss-Prot:Q0D847] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0012860 | OsCMeo_11g0012860.01 | Chr11 | 14537779 | 14542110 | - | NAM | ||
| CDS seq | atggctcccgaggtgtacgaggagtcctacgacgagctcgccgacgtctactccttcggcatgtgcgtcctcgagatggtcaccctcgattacccctacagcgagtgctccaaccccatccaaatctacaagcgagtcatctccgggatcaagcctgctgcgttgtacagggtgagcgacccggtgatgaggcaattcattgaacggtgcctcgccccgacggcgcgagctgctcgacgacccgttcctgctgccgctcgaagacgatggcttcttctccggcgacggcgatggccatggcagtgttggcgttgcctactacaatttgatggaatccctggcaacagtgtcaagttcaatgaccttccttcctga
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| Protein seq | MAPEVYEESYDELADVYSFGMCVLEMVTLDYPYSECSNPIQIYKRVISGIKPAALYRVSDPVMRQFIERCLAPTARAARRPVPAAARRRWLLLRRRRWPWQCWRCLLQFDGIPGNSVKFNDLPS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.495075 | 0.000000 | 1.439343 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0114600 | SBH | 3.069757 | 2.562893 | 1.257075 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0160300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0012910 | RBH | 0.000000 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0012880 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0012590 | RBH | 0.000000 | 0.060813 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0012950 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0227300 | RBH | 3.6588615 | 12.0892225 | 9.8666025 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0012860 | RBH | 0.110046 | 0.000000 | 0.107826 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0243300 | RBH | 2.948337 | 2.2060325 | 3.527585 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0012950 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0013040 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0012670 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0012530 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0012880 | RBH | 0.053192 | 2.009663 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G012750 | RBH | 0.149378 | 0.437731 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0012840 | RBH | 0.225804 | 0.000000 | 0.000000 |
