Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_11g0006770 | OGI:11016580 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr11:5448075-5460248 | ||||||||
| Gene Symbol | OsFbox587, Os_F0097 | ||||||||||
| DNA seq | atcgcaatttatcaccattattattgcatatttgccttcaattcatacatacaccttctagctctatcataccgttctaccaattgttttcatcaactcgaatttcaacaaaaaattgtttctagctgcagacatgttctatcaaaggcatactacaaccatgaacagcctgggtcttgttaattctccgagtcgataccagtacacacaaacttaaagcctgtaaaaaaacacacagtcaactcagagaggagaggcccttttatagataaatgagaaaattagtttacttgaaattatccatagaattttcttagaacatcacctgcccagcatgcaaaaccatctaaatattacaaagttaaaagtatgtaattaaaatatgatgccaaaatattttgaacgcttacttgatagagcatgtataaataagtataacagtggagaaaaaactaaattgtatgagatgtagtaaatatgcagtgagacaaagcttattcgacacacaaaagggcaagcatagcttcactacagaaacagaattagatgttcacatttgtttgtatcagcacttgagcaggatctgcatgaccacagattcaatcaaaataggctgaataggaagataacgcttttaaatgttgatacttgcatcagtaaaaacatgagagcatttacaaaagtttcaatagatagtgcatgcatgataaaaaaaacatttgttaaattcagaaatactcattgtgtgttttaactaagtcagaacttataacaattgactattgacagtacttggatttataacacacattgataactgcataataagaaacatgggtgttcataaataactcacgtccagaacatcgaatactaattttctctagtggtatgccattggcattcaagacctccaaaattttgagaataattccatgaacctctttgcatttgatttcaactatttgaagatggctagctgcaaatgattgttccaattgactgtaacttccctcggtttccactaaattgttgggtacctgaagccagcaaatattcaactaattaaatcaagcagaacctacatgtacaaaatatagtaaattagtaatacctctgaaaccttaagagtaagcctttcaagaagtggtgcatattggagaaaccaagttaatgcactgatgtcaggagccacaaaccatgcattcagaactaaattcttcaacttgctaaatgtagagcaacactttaaatccttgttgaaaagatactacacaaaatgcaaggacacaagatcaaataacaaatataccaaagaaaagttcaaatacaaatagcgatcatgtcataaagaacatctgatgaaaaaggtttatagttcatctccattgtaggttcatctattttatgagaaatatccataagattgccaaactgaataagacatgccacaatttaaagcagtcaccaattactagttatctagttatgtaagaaattgcaaaactttctgtaatgatatagcatgataatcaggttgatatgtgatgattcgataggaacaaatgaaatacgcttatgcatgaagtcaggtgtcaacgtaatttagttatggatggttacagcacaagtaataaaactcaagataatgctaggagttacgagagaggcaactgcaagcataccacatcagaataagctgacaacttcaagtctttagcttccgtcaagccttcaagaaacacgcagccgtagtcactgggcgcataataatcatgacaacccttgcattcagcatccccacaatcatcgtagcggccattgctacatcggtcgtcacagaaatgatcaagcctaaccgtcgcggttgctaaagaaggcatcctttcgagcaatggagtcctccccaaatttttattgaacttgaaggagacaaggctagggaaatcaatccgggcgcgataattcgagtagaagaagcagtatctcatgctcagattcctcacggttggagaccacatttccaggccaccaacgtagcaatcctccatcttgagatccacgagtgatggacagctcgagaaatcaagaacttggttgtttcccagtacacccttgagctctagggttgtgaggctgtcggagacgaggggcgaatcggggagcggcaaggggacccgggggacggtggagaggaggaaccggagcacccggacctggcggcgaagggcgcggcggatccagcggttgccatgccgctccccgccggggaagggcccgtcgaacctgaggtcgaggtcgcaggtgtccagggccgcgcggccgcggcggaggcggagcaggcggtcgacgaagaggacgaacgcgtcggctctggcccaccccctggcgccggcgacgcggacggcgggcacggacctccagaggtcgcgccagcgctgggcgagcacgcaggtccgcaccgcgtcgcgcgacggcaggagggagaggacgtggtggaggacgtcctccggcaggtcgctgatgcggtccgcgccgctcgccatggcgcggccgggcggggcgctccgtcgaacaggtggcgtgcgcgggcgccgcgagtggcgacgagacgaagcgtcgactgcgatagggtgaagtgagactgcgagagaccgagtgagagaacgaagagccgaagacactcacagaggtaaaaaaaaaaaacccaaaaaagaaagggacaattttgtttttgcccccactttaatctctaatattaattttgcccttattttttaggttttcgtttttacccccacttttttaaccgaaagaggcgtttacccctgatttggatggaagttagtgggaccgggtttatggcaggaatgatttggatggaagctagtgggaccgggtttatggcaggaatgatttggatggaagttagtaggaccggatttatggcaggaaataaatatgttttgaattagtgatttacctttttactcttgtgaaagagttaacccttccaggctatctctcatctcctctcactgcacaatcaaaccttccagattatgttgtcatgctttgtgatacttgtgaggtacaatatgacttcatatgattgtgtaaaatgtcgttgaaattttatcaaattttttgttcaatttctgtcaaaatgctgccgaaattttgtcaaaattccatcaaattcaaaacttgtctaaattgtaatgtcaaaatctatccaaatctgtcatttaattttaaacatattaaaaaaaatccaaagccattgcataatgggggcaaaaacacaattaatgaatagttatgggagagggtataaatgtcctatttaacatcgttaactcctccatccaaaacaggggtaaaagtatctttcggttaaaaaataggggcaaaaacgaaaaccctaaaaagtaggggcaaaatcaatattagagatcaaagtgggggcaaaaatgaaatcatcccaaaaagaaaagttcagagctgtagtaggtatgaattttactgaaatttaacatgaattaattcgactctccccagattcacctgcccggaaagaaaccttttagtagaaagtactccctcattcttaaaataagacaactttcagcttataatactaaacaaatcgtaatactagcaaatgctgctttatcttagaacggcaagagtactatactacctttgaaaaattttttcaccaagtaaaattgtagcggaattacacttcaaatttttatttctccttaaacaatggaaaaaaaaagaccctctaacttagtcattgtgaaattggcaggtcatacgaatgaaacattgtaactataggcaatatcagtcgtccattttaatatacacggttgagaactttagagtttcagctacactgctatgctataaaaaatatattataattattatctgctttgattttggtaatcccgtctacatagtttcgtaacaataaactgttattttaagaagcctagtgcataggtgaaaaatcatatttcaagaagaacagtaatatattttatttacctcctttatctatattattatttattatcaagcgtatacctactcccttcgtcaaaaaaaaaaaagtagatatgacctctcctactacgataatctaaatatataattgtccatatcaattgtactaggatagttcacacctcccgtctaggttgagtttttttttttttgagacggagagagcacatgatacaaatagtagtgcagcgaagagagttcctctaacgtagcctcccacttgatgtggtcactgatatgtgagcctgtggataggtcccacatgtaagtaaccatgccttacattagatgatctcaatttgaatacaatttactactattttatcattgacaaacctttatttttctcttaacaaacaagatttggccaagattttgtttcatgttatttattttcatctgttaacaaccatagcgcttctcactagtaaggccttgtttagttggggaaattttttgggtttgattgtcacatcggatatacggacacacatttaaaatattaaacatagtttaataataaaacaaattacaaattctgccaggaaactacaagacgaatttattaagcctaattaatctattattagcaaatgtttactgtagcaccgtattatcaaatcatggcgcaattaggctcaaaagattcgtctcgtaatttacacgtaaactgtgtaattagttttttttccacatttaatacttcatgcatatgtccaaacattcgatgtgatgggtgaaaagtttttgttttgggaactaaataaggcctaataataaaaggcacaaattaattggtgacatagcaggccaaagtgccaactagttgaactgagccactgaagatcaacacagaaacgaagaatccaggctcgcacatccgctcggccagaaacacataaaaaggacattgcagcaaacgatatgtctagattgcatcaatatggtacggagaatgagacacgactagtcagaggacagcaacgccactgctgtcgtcgtttctgaataataagggagactgcatgcacacgtcaatagagaacagcccaaaccttcagaacctttgctttgatccaaaacggccaacctaaacacaaacctgcatgagataagtagaaaatttcagtgatttgataatagactcaaatgcagttgtccttgttatcactcacaaaagttttatcctaacagtgacttattatcacctcctccctgtactcacaacagagcacttctttgataaagcttcctgcttcccaacagataggcctttgatacagaaattcatgcgtctattgcaccacacttacactatttgattatggtcataagggtaaacaatataagtttggtggatctgaatcaatatggttactataaagggaacaaaacaacatatcctatcttttatgtgcagacaagctagagaatgcccattgtttgattgtgaactctgaagatttcgattaccaaacagagacaaaattacataaagtgaagcaatgaaaagaaaaaagaacaacaccaggctgaccaggtgtcatgtaaaatagttaaccactcaagataagcaagcagattagataataaatacagtgaattcagatcaaacacttgatgtcaacttgtcaagttcttatagtctttagatgagcacttaactgctgcagtagtagggtagtaaaattttaatctaaccactgacaaggacaattttaatcattcgactattttaaccaatgttacgaactagaattcgaaattggggttaggaacagaagaacagagttgagacaggaagagcaacttggagagtaagagcaacttggaggcggagggggggaggggaggaaggcaaggccggcgagcctcgcctcgcctgctgggtgcgggggagggagcggccgcgccggcgagtggcgactcgcgtgtgaggaatgccgtcgagccggccgtcgggaagggattgagctcgtctgactcgcttctctctcacctggtcactgatatatcagtgccgaattaggatcctctgacgtgaagtcgaaggaacgtggtgattgacatatgatacgtgccgtcttaccggtcttaagagatgaaagtaacctcttcatcccgtaaagtataaatcttgatacaaatttcatatatatatttctaagtttggtttttagaatggatagagtgagtcaaacaattaatttccaatctccttatcccgattcacctattccgattcaccgaaaatatcttctgactatgaacatttgggttttataaatatctgtacatactatgctataacattatgttattctttgaaaattttaacgtatatgactctcttcatcccaacttgatcatcccctaagcaaaaaatcaagaataagtacatcgaaacatccatcattctgaaattaatcatcatcgattaaggtattttgtctttttgtgttcaacgagaattaattcattctttaaatgttggatgggttgaaccgatagaaattaatctttgttggctgcatgcatatagttgtgtgcatgcagcacattacacgatacacatttactattttcacaaataaacaaagtaacactttgttagatgatgattattttaaaaaattctcaaaaattttaggtgatgattaaattaggatgaaggaagtattaaactaaataaatatgctcctactttttttcaactgtacaacaataacttgccattacctcaaaatatagctttcaagagtaggggaaactaagtacaggtcgtcgtcgtgaatgacgcatcatcactatcacacccatgacgaccacaaatctgtttataacctatatctatgatgggcaaaaggtttacttccaataaggaaaaagaagatgatagaaattaaataagaaaaaagagattgaagaaaaccatatgaacaattgaaacatagtgaaaaccttatgaacaattgaacatagcgcagtgcagtattttatcgagtgaaacaaactcggtgcaccgaatcggttctacagcgcaccaatacacaacacaaatcctatttcatttttttccacacctctcctgcgtcctgccggcttcctcctttctctcatctcttgtgctggaggattgagcaataaattggagggttagcaagagttaggttctgtttggtagagctccaactcctaagggcctgtttggcacagctctagctccagctccatccctcctagagctgggtggagctctctcacaaaatgaactagagttgtggagctaggtttaggcagctccacaactccactctagacccaactcctatagcaaaatttaggagttggagctgtaccaaacaggccctaaatttagctccagaagttaggtctggagtggagttgtggagctgcctaaacccagctccaccagtctagttcattttgtgagagagctccacctagctcgctcctatttttgatggagctgaaactgtttggctaagctctgtgccaaacaggcccttagttacttggtcctatctccatccatcaagtgctaattgatgtttattttggtattgttgcacaaaccaaatatgatgataaaaaatgaacggatggagtatttcttatacatgagataggtcaattcctctatgatcttggtgacgaaataaatatgtcttaggctaatcccgacgcagaaactatcaaattattttaatactcgttactgtcatataggatgttttttgtttctttggtgaagtgaagtgaccaagtgaatgaagagagtaaatcgttacaaatattatgccaacaaacaatgccaccacatagctggtggagtatcaatttacatccaggggtcacagaaaccaaacagaaaagctaattccgtggggatcagtagagcaatgttcagaaacacaccttgaagaaaatgttcagccgcacggccagaaacacaccagaaagaaaaatgcaaatggacatttgcagcaaccgaatttatatctaaattgcatcagatttagaaggcgagttctttagcatcatacgcaacagagctataccactcatcctgcaaggctatactagcataatatataaggctacttataatgtcgtacatacagaactagatatggtaccgatacgagttctttagcatcataagcagtagagctatgactcatactgcaaggctacactttagccaaatatgtaagagtacttctaatatcgctaatatagtaaatatggaaccaaatccgatgagactacttaatcaatataataagaggactgcaacaccacggatacgtctgaataatatctcaagagatatctcatccaccaacggcccaattcttccgacctcctcttgatccagaaggctaaaaaaaattcaactgcatgagagaactagctaacttcattgactgaaatagaatcaaataaagaaactgtacatgctacaactaaaaaaagagtcccgatagctagacttagggtggtttatgatctaattctcctcgtactcagagcagggaccatatgacaccttacggatttcagatgcttttgatacaacaattcgtgtctagtgcactaaacttatgctattttattctggtcataagggtaacgataaagtttggtggatctgaatcgatagcatatcttttatgtgcacacaagctagctcacttgagtatgtgcattgtctgattatgaactccgaagattgggcagttatcaaggagacagaaaaaacagcataaagttagccaatgaagaaaaaaggagtaacaatgggctgacctagtttcttttataatggttaaccacccaaaattagcatgtatgctggatgataaatacagcatagttagatcaaacacttcatgtcgagttcttatagtttttggaaaggaaaatatgcagacttgaaatgaatgaataaaacgatatcaacatggggctcatggagttgaattcaaaaaatgatggcatatggtgcaatactgccaatactacattggataaggtagaaagaaggatggtgatagtagtctatagtttatcttctcttttcctttcattactgactgggggtcactaccatttattttaaaaaattaattacagtaactctaaacttcagtcaatgaaaagtcctttgtttccgcctttatgtacatatgcagaattgcagattgcataaatataagcagaaagcctcagcacaaaaccttcattgccagattgcaaaaaagatttcaatattcccaacttcacatagagggtatatttaaaaaatcgttaactgaaagtgccactaatcaatgaaacagattcttaagtactcgttattcaatagaaaacacggttacttctaaagagtggctttactcaattactaaaacagctactccctccatcctaaaatataaggcacaaccacttttttctatgtctcataatataaggcgtgcatgcatgcatatattaattatcatctcttggttctttaaatttggtttattttaattcatgtaccattaagtctcacaatcacattgcttgcatgtatggatgtgattcaatcaaggaggtgactaaatttttttggtctgtgtgttagaagtggttgtgccttatattttgggatgaagggagtactacacatgaaacagattcaaagttctcgttatttgttccaattgagtaaaatattcatcaagtccataagatccatagagatagaaaataaagtcacatcatagctaaaattttgttgcataacagtctaaaacataactaaaaaaagataacatatccatctaacctctaggagcagctgaaaccagtacagacaaaattaaaacctgcagacaacaaaaaattcaatcaaaatgggctggtgtggacaaaggataatattttacagtatgaagtatgaacagtacagaacatatgcaataatatcaataaattatctagacatatacaactcaaaactagtcagtgtatgatttcatcatgcatgcatagcaattcaacccaacgatagtataaagcgtttagatgcttgctagtttgatacaaatattatattacccttcattttctcttcaacaagtatggggtgcctgcttatctctcacacatgaatgcagattttgaccaacgaatttcttttgattagcttgaattttttcactgcttggtttcttaattaatacatgtattcacaaattttatgtaaaaataaccatgacatgagtcatcagattagctcacattcagatcgacagtgttcactagtcagtttgatgttaattttctcgaggggtatgccaaaggtacccagggtcttcaagaatttgcaaacccacatgacctctttgcctttgcatttaatttcaacaatcttaagatggttggatacaaacggctcttctggtatcttttgttgtcctgcatccatagaacatttgggttcctatgcatggaaaataagttatcatactagctcaatcaaaacatctatagtaactttaataacatgcacctatcttatctacaatatataatacctctgggattttaatagtaagcttctccaaaattggtgattgctgtagaaaccgaatcaatgcactgaggtcatgagtcatgcaccattcaccaagtgccaaagtcttcaacttggcaaatgtatgacatgccaagagcaaatttaaatccctcctgaaaacatactgcacaaagtgcaaaggagccacagatcaattaagtagccattatttttgtaagtacaagatgtagtataaccagaaggaagcaatgaaaaatatttaaaaacaatcttttgttaaaggtgtaagtaccaagcatgatcatgctaatgctaccctagtgatggatatgtttactacataacaagtggtgaaattaaaactatattagaaagttacaagacaagaagacacaagaaagatatacataccattgcaggttcagctgacaactccaagtgtgtagcttccaataaaccattgagacaaacgcatttgctgcggtcagaataattgcagcaatcaacgcaagaatcgtcgccacagtcaccaaggacactattgtcacatctgtctgcataatcgtcatcaaatataacaattgcagctaccaaggatggcatgctttcaaggaaaggaacgctaccagaacatccatctagctccaatgaaacaacacttggaaaagacatctgagtacgggtagctggataaaattcacaggaggcaaggctcaagattttaacggatggagatgacatcttctcggcattgatacggcagcacttcatcttcagagcaatcagcgccgggcagcaggagaaatcaagaatgttatcgttgccaagaacaccatcaagctctaacctggtgaggcgctgagagatgagaggcacatcaggcagcgtgatgtacgcgggcaaagagatccgtagcacccgggcatggtggcgcaacagggctagcatgatccagcggttgacatgccaatccttccccttgtcctccgggaaatcgaagtccaggtcgcacagctccagaggcgcgtcgcggcggcggcggctgacgaagaggccgtccacgaagcggatgaacctgccgaggccgtcgccccgcagccgcggattccacccctcgacgtcggtgacgcggagcgccggcgcgtgctcccagaggtggcgccagcgccgggcgagcacgcacgtccgcaccgcgtcgtgcgccgggagcagcgatagcacggcgtggagcgcctcgtccggcagagcgctgacgcggtcgggcacttcctccggcgccgctcgcctcgccggcgccctcctaatccggggcggcattccgtcgaacagttgccgcgctgagcgattagcgtggcaacggagaatgatagagagaagcgagagatatactagttttataatccatcgaaccgccgccgcttcgatcgccgggcgttggcgagcgcgttcattcgtcccgggagggaggccgcgcgtagggc
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| CDS seq | atggcgagcggcgcggaccgcatcagcgacctgccggaggacgtcctccaccacgtcctctccctcctgccgtcgcgcgacgcggtgcggacctgcgtgctcgcccagcgctggcgcgacctctggaggtccgtgcccgccgtccgcgtcgccggcgccagggggtgggccagagccgacgcgttcgtcctcttcgtcgaccgcctgctccgcctccgccgcggccgcgcggccctggacacctgcgacctcgacctcaggttcgacgggcccttccccggcggggagcggcatggcaaccgctggatccgccgcgcccttcgccgccaggtccgggtgctccggttcctcctctccaccgtcccccgggtccccttgccgctccccgattcgcccctcgtctccgacagcctcacaaccctagagctcaagggtgtactgggaaacaaccaagttcttgatttctcgagctgtccatcactcgtggatctcaagatggaggattgctacgttggtggcctggaaatgtggtctccaaccgtgaggaatctgagcatgagatactgcttcttctactcgaattatcgcgcccggattgatttccctagccttgtctccttcaagttcaataaaaatttggggaggactccattgctcgaaaggatgccttctttagcaaccgcgacggttaggcttgatcatttctgtgacgaccgatgtagcaatggccgctacgatgattgtggggatgctgaatgcaagggttgtcatgattattatgcgcccagtgactacggctgcgtgtttcttgaaggcttgacggaagctaaagacttgaagttgtcagcttattctgatgtgtatcttttcaacaaggatttaaagtgttgctctacatttagcaagttgaagaatttagttctgaatgcatggtttgtggctcctgacatcagtgcattaacttggtttctccaatatgcaccacttcttgaaaggcttactcttaaggtttcagaggtacccaacaatttagtggaaaccgagggaagttacagtcaattggaacaatcatttgcagctagccatcttcaaatagttgaaatcaaatgcaaagaggttcatggaattattctcaaaattttggaggtcttgaatgccaatggcataccactagagaaaattagtattcgatgttctggacgctttaagtttgtgtgtactggtatcgactcggagaattaa
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| Protein seq | MASGADRISDLPEDVLHHVLSLLPSRDAVRTCVLAQRWRDLWRSVPAVRVAGARGWARADAFVLFVDRLLRLRRGRAALDTCDLDLRFDGPFPGGERHGNRWIRRALRRQVRVLRFLLSTVPRVPLPLPDSPLVSDSLTTLELKGVLGNNQVLDFSSCPSLVDLKMEDCYVGGLEMWSPTVRNLSMRYCFFYSNYRARIDFPSLVSFKFNKNLGRTPLLERMPSLATATVRLDHFCDDRCSNGRYDDCGDAECKGCHDYYAPSDYGCVFLEGLTEAKDLKLSAYSDVYLFNKDLKCCSTFSKLKNLVLNAWFVAPDISALTWFLQYAPLLERLTLKVSEVPNNLVETEGSYSQLEQSFAASHLQIVEIKCKEVHGIILKILEVLNANGIPLEKISIRCSGRFKFVCTGIDSEN |
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| Function | MEIOTIC F-BOX protein MOF [UniProtKB/Swiss-Prot:Q7X7A4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0006770 | OsCMeo_11g0006770.01 | Chr11 | 5448075 | 5460248 | - | NAM | ||
| CDS seq | atggcgagcggcgcggaccgcatcagcgacctgccggaggacgtcctccaccacgtcctctccctcctgccgtcgcgcgacgcggtgcggacctgcgtgctcgcccagcgctggcgcgacctctggaggtccgtgcccgccgtccgcgtcgccggcgccagggggtgggccagagccgacgcgttcgtcctcttcgtcgaccgcctgctccgcctccgccgcggccgcgcggccctggacacctgcgacctcgacctcaggttcgacgggcccttccccggcggggagcggcatggcaaccgctggatccgccgcgcccttcgccgccaggtccgggtgctccggttcctcctctccaccgtcccccgggtccccttgccgctccccgattcgcccctcgtctccgacagcctcacaaccctagagctcaagggtgtactgggaaacaaccaagttcttgatttctcgagctgtccatcactcgtggatctcaagatggaggattgctacgttggtggcctggaaatgtggtctccaaccgtgaggaatctgagcatgagatactgcttcttctactcgaattatcgcgcccggattgatttccctagccttgtctccttcaagttcaataaaaatttggggaggactccattgctcgaaaggatgccttctttagcaaccgcgacggttaggcttgatcatttctgtgacgaccgatgtagcaatggccgctacgatgattgtggggatgctgaatgcaagggttgtcatgattattatgcgcccagtgactacggctgcgtgtttcttgaaggcttgacggaagctaaagacttgaagttgtcagcttattctgatgtgtatcttttcaacaaggatttaaagtgttgctctacatttagcaagttgaagaatttagttctgaatgcatggtttgtggctcctgacatcagtgcattaacttggtttctccaatatgcaccacttcttgaaaggcttactcttaaggtttcagaggtacccaacaatttagtggaaaccgagggaagttacagtcaattggaacaatcatttgcagctagccatcttcaaatagttgaaatcaaatgcaaagaggttcatggaattattctcaaaattttggaggtcttgaatgccaatggcataccactagagaaaattagtattcgatgttctggacgctttaagtttgtgtgtactggtatcgactcggagaattaa
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| Protein seq | MASGADRISDLPEDVLHHVLSLLPSRDAVRTCVLAQRWRDLWRSVPAVRVAGARGWARADAFVLFVDRLLRLRRGRAALDTCDLDLRFDGPFPGGERHGNRWIRRALRRQVRVLRFLLSTVPRVPLPLPDSPLVSDSLTTLELKGVLGNNQVLDFSSCPSLVDLKMEDCYVGGLEMWSPTVRNLSMRYCFFYSNYRARIDFPSLVSFKFNKNLGRTPLLERMPSLATATVRLDHFCDDRCSNGRYDDCGDAECKGCHDYYAPSDYGCVFLEGLTEAKDLKLSAYSDVYLFNKDLKCCSTFSKLKNLVLNAWFVAPDISALTWFLQYAPLLERLTLKVSEVPNNLVETEGSYSQLEQSFAASHLQIVEIKCKEVHGIILKILEVLNANGIPLEKISIRCSGRFKFVCTGIDSEN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0006770 | OsCMeo_11g0006770.02 | Chr11 | 5448854 | 5460248 | - | NAM | ||
| CDS seq | atggcgagcggcgcggaccgcatcagcgacctgccggaggacgtcctccaccacgtcctctccctcctgccgtcgcgcgacgcggtgcggacctgcgtgctcgcccagcgctggcgcgacctctggaggtccgtgcccgccgtccgcgtcgccggcgccagggggtgggccagagccgacgcgttcgtcctcttcgtcgaccgcctgctccgcctccgccgcggccgcgcggccctggacacctgcgacctcgacctcaggttcgacgggcccttccccggcggggagcggcatggcaaccgctggatccgccgcgcccttcgccgccaggtccgggtgctccggttcctcctctccaccgtcccccgggtccccttgccgctccccgattcgcccctcgtctccgacagcctcacaaccctagagctcaagggtgtactgggaaacaaccaagttcttgatttctcgagctgtccatcactcgtggatctcaagatggaggattgctacgttggtggcctggaaatgtggtctccaaccgtgaggaatctgagcatgagatactgcttcttctactcgaattatcgcgcccggattgatttccctagccttgtctccttcaagttcaataaaaatttggggaggactccattgctcgaaaggatgccttctttagcaaccgcgacggttaggcttgatcatttctgtgacgaccgatgtagcaatggccgctacgatgattgtggggatgctgaatgcaagggttgtcatgattattatgcgcccagtgactacggctgcgtgtttcttgaaggcttgacggaagctaaagacttgaagttgtcagcttattctgatgtggtacccaacaatttagtggaaaccgagggaagttacagtcaattggaacaatcatttgcagctagccatcttcaaatagttgaaatcaaatgcaaagaggttcatggaattattctcaaaattttggaggtcttgaatgccaatggcataccactagagaaaattagtattcgatgttctggacgtgagttatttatgaacacccatgtttcttattatgcagttatcaatgtgtgttataaatccaagtactgtcaatag
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| Protein seq | MASGADRISDLPEDVLHHVLSLLPSRDAVRTCVLAQRWRDLWRSVPAVRVAGARGWARADAFVLFVDRLLRLRRGRAALDTCDLDLRFDGPFPGGERHGNRWIRRALRRQVRVLRFLLSTVPRVPLPLPDSPLVSDSLTTLELKGVLGNNQVLDFSSCPSLVDLKMEDCYVGGLEMWSPTVRNLSMRYCFFYSNYRARIDFPSLVSFKFNKNLGRTPLLERMPSLATATVRLDHFCDDRCSNGRYDDCGDAECKGCHDYYAPSDYGCVFLEGLTEAKDLKLSAYSDVVPNNLVETEGSYSQLEQSFAASHLQIVEIKCKEVHGIILKILEVLNANGIPLEKISIRCSGRELFMNTHVSYYAVINVCYKSKYCQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0006770 | OsCMeo_11g0006770.03 | Chr11 | 5448075 | 5450728 | - | IsoSeq | ||
| CDS seq | ctctcgcagtctcacttcaccctatcgcagtcgacgcttcgtctcgtcgccactcgcggcgcccgcgcacgccacctgttcgacggagcgccccgcccggccgcgccatggcgagcggcgcggaccgcatcagcgacctgccggaggacgtcctccaccacgtcctctccctcctgccgtcgcgcgacgcggtgcggacctgcgtgctcgcccagcgctggcgcgacctctggaggtccgtgcccgccgtccgcgtcgccggcgccagggggtgggccagagccgacgcgttcgtcctcttcgtcgaccgcctgctccgcctccgccgcggccgcgcggccctggacacctgcgacctcgacctcaggttcgacgggcccttccccggcggggagcggcatggcaaccgctggatccgccgcgcccttcgccgccaggtccgggtgctccggttcctcctctccaccgtcccccgggtccccttgccgctccccgattcgcccctcgtctccgacagcctcacaa
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| Protein seq | LSQSHFTLSQSTLRLVATRGARARHLFDGAPRPAAPWRAARTASATCRRTSSTTSSPSCRRATRCGPACSPSAGATSGGPCPPSASPAPGGGPEPTRSSSSSTACSASAAAARPWTPATSTSGSTGPSPAGSGMATAGSAAPFAARSGCSGSSSPPSPGSPCRSPIRPSSPTASQ |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr11 | 5449114 | 5449760 | - | OsCMeo_11g0006770.01 | OsCMeo_11g0006770.02,OsCMeo_11g0006770.01 | All |
| A5 | Chr11 | 5449344 | 5449760 | - | OsCMeo_11g0006770.03 | OsCMeo_11g0006770.01,OsCMeo_11g0006770.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.290486 | 0.000000 | 1.817702 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0208000 | SBH | 0.0 | 0.0 | 0.209669 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g10180 | SBH | 0.0 | 0.0 | 0.053428 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0208000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0006840 | SBH | 0.000000 | 0.0 | 2.165890 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0006790 | RBH | 0.0 | 0.640686 | 0.536838 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006760 | RBH | 0.599847 | 2.416250 | 3.385246 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0006710 | RBH | 0.143918 | 0.064702 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0006670 | RBH | 4.540338 | 5.618816 | 4.137500 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0089200 | RBH | 1.745601 | 3.7208885 | 5.497554 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006690 | RBH | 0.141686 | 0.061057 | 0.234418 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0090400 | RBH | 1.8792215 | 3.3278555 | 6.6744905 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0006650 | RBH | 0.049441 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0006750 | RBH | 0.436210 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0006730 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0006790 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0006800 | RBH | 0.182391 | 0.520129 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G006760 | RBH | 0.387813 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006590 | RBH | 0.353743 | 0.000000 | 0.637920 |
