Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_11g0001500 | OGI:11003670 | 5/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr11:1003901-1004850 | ||||||||
| Gene Symbol | RLCK348, OsRLCK348 | ||||||||||
| DNA seq | TCACTCACCAATTTTCTGGTTGTGGGCGTGAAGATTCGCCACCACCGCCTGGAAGAGCAGTACTCCAATGCAAGGGTGAAATAGAGCGGTGCTATCGCGGACAAGATTTTTCCAATGTCCGCCAACTCTATCATCTTGAAATTGGTGAAAATAAAAGATGAAATGTGTATTAAATATATACTTACGAGTCGATAGTATATATAGCGAACACCGATATGCGTCGTCATCGAGTGATCTAATTATGCCGTTAGTTATTTAAGCATGCGAGCCACATGTGGTGAGCATATGATGGCAACCATAGGGTGTGTTTGGTTGCCTGCATGTGTTTTGGCTCGCACCCGCCCATGCAACTTCGGGTTGTTTGGTTGCCTGTTCGAAGATCTTAGCCAAGCCCTAAGGATGCAGGATTCCCTCCACAGCCAGGCTCTAGAGGAACGCGGGGAATGAGCTTCGCTCCTCAACCTGGATGAGCGGATGCAGGGGCGGGTGCCTCGCGCGATGCAACGCCTGCAGTCCGCTCACCTCCACTGTCTCATTTGCTCCTTCCCCATCCTCTTTCCTCTCCTTCTCATTGTTTCCCATCTTCCTCCTCTTCTCGTCGAAGCCACCGTCATCTTCCAGAGCACTGTCGACTCTCCTCGTTTCTGAGTCGCCGGACTGACCAGATCTGGCGGCCATGAGCTCCTAGCACCATATCCGGCGGCCTTGACCTAATGGCAACTCACAAGCCATTCTCTGTGTCCTTGATGTCCATCTTTGGTGAGCACCTTGACTGCAACAGGTAGTGACTTCAGACCAACCCTGACATTCTCATCTATGTAGCCCTTGTAAACAGTCCCAAACCCTCCTTCACCAAGAACGTAGTCAGCACGGAAGTTCTTTGTGATGGTCTCGAGTTCAAACAATGTGAAGTCAATCACATAACGTGTATATGGAGATGTTCTTGGCAT
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| CDS seq | ATGCCAAGAACATCTCCATATACACGTTATGTGATTGACTTCACATTGTTTGAACTCGAGACCATCACAAAGAACTTCCGTGCTGACTACGTTCTTGGTGAAGGAGGGTTTGGGACTGTTTACAAGGGCTACATAGATGAGAATGTCAGGGTTGGTCTGAAGTCACTACCTGTTGCAGTCAAGGTGCTCACCAAAGATGGACATCAAGGACACAGAGAATGGCTTGCGGTGGTGGCGAATCTTCACGCCCACAACCAGAAAATTGGTGAGTGA |
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| Protein seq | MPRTSPYTRYVIDFTLFELETITKNFRADYVLGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLTKDGHQGHREWLAVVANLHAHNQKIGE |
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| Function | Probable serine/threonine-protein kinase PBL8 [UniProtKB/Swiss-Prot:Q8GXZ3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0001500 | OsCMeo_11g0001500.01 | Chr11 | 1003901 | 1004850 | - | NAM | ||
| CDS seq | ATGCCAAGAACATCTCCATATACACGTTATGTGATTGACTTCACATTGTTTGAACTCGAGACCATCACAAAGAACTTCCGTGCTGACTACGTTCTTGGTGAAGGAGGGTTTGGGACTGTTTACAAGGGCTACATAGATGAGAATGTCAGGGTTGGTCTGAAGTCACTACCTGTTGCAGTCAAGGTGCTCACCAAAGATGGACATCAAGGACACAGAGAATGGCTTGCGGTGGTGGCGAATCTTCACGCCCACAACCAGAAAATTGGTGAGTGA
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| Protein seq | MPRTSPYTRYVIDFTLFELETITKNFRADYVLGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLTKDGHQGHREWLAVVANLHAHNQKIGE |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 1.532822 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0122150 | RBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g02860 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0122150 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0001480 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0001520 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0001570 | SBH | 0.648200 | 6.846839 | 10.431496 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0001460 | SBH | 0.000000 | 0.539744 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0001450 | SBH | 3.108166 | 23.404846 | 21.478722 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0018700 | RBH | 0.721351 | 0.4893715 | 2.6536815 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0001440 | SBH | 0.148134 | 1.217515 | 1.372021 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0020200 | SBH | 7.8413375 | 1.8862965 | 33.15073 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0001320 | SBH | 0.164591 | 0.171412 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0001460 | SBH | 0.187752 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0001450 | SBH | 0.000000 | 45.781345 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0001430 | SBH | 0.082032 | 0.0 | 2.948549 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0001490 | SBH | 0.0 | 10.407032 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G001450 | SBH | 0.000000 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0001430 | SBH | 0.0 | 22.798973 | 8.694711 |
