Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_10g0015600 | OGI:10058840 | 10/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr10:19437292-19437522 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctaggcggggtcaggtaagagaggggcgacgaagcggaagaggaagaagagcccaggaacggcgacgacatggctcccgcgacgccgcggcgagggccagggtagcttcttgccggcggcggagacgacgacgacgagctgcgcctgcgcgcgcttgctccgcgccggggacgacgacgacgacgacgacgaggagtagtagtagtcgtaccacggtgaacccctgcgcat |
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| CDS seq | atgcgcaggggttcaccgtggtacgactactactactcctcgtcgtcgtcgtcgtcgtcgtccccggcgcggagcaagcgcgcgcaggcgcagctcgtcgtcgtcgtctccgccgccggcaagaagctaccctggccctcgccgcggcgtcgcgggagccatgtcgtcgccgttcctgggctcttcttcctcttccgcttcgtcgcccctctcttacctgaccccgcctag |
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| Protein seq | MRRGSPWYDYYYSSSSSSSSSPARSKRAQAQLVVVVSAAGKKLPWPSPRRRGSHVVAVPGLFFLFRFVAPLLPDPA |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_10g0015600 | OsCMeo_10g0015600.01 | Chr10 | 19437292 | 19437522 | - | NAM | ||
| CDS seq | atgcgcaggggttcaccgtggtacgactactactactcctcgtcgtcgtcgtcgtcgtcgtccccggcgcggagcaagcgcgcgcaggcgcagctcgtcgtcgtcgtctccgccgccggcaagaagctaccctggccctcgccgcggcgtcgcgggagccatgtcgtcgccgttcctgggctcttcttcctcttccgcttcgtcgcccctctcttacctgaccccgcctag
More
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| Protein seq | MRRGSPWYDYYYSSSSSSSSSPARSKRAQAQLVVVVSAAGKKLPWPSPRRRGSHVVAVPGLFFLFRFVAPLLPDPA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 6.519455 | 2.847242 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0015970 | RBH | 0.0 | 0.376155 | 4.127322 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0016210 | RBH | 0.0 | 2.558950 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0016100 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0015930 | RBH | 0.0 | 9.503664 | 3.047252 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0313200 | RBH | 0 | 1.520762 | 1.041998 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0015980 | RBH | 0.0 | 13.667209 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0015730 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G015750 | RBH | 0.0 | 0.0 | 0.106816 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0015890 | RBH | 0.0 | 0.515611 | 0.000000 |
