Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_10g0014440 | OGI:10056530 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr10:18562324-18571010 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctctctctctctctctcgcgtcgcctgcgtccaattcaattcaactgcggcggcgacggcgagcgccccacgcaagcaaaatttccccagaaaaaaagcagagcgcggcggcgacgacgacgacgactacgcgaggcgacgcgagagcggaggagacctgagcgcgcgggagcgggatgatgggaggggtggcggcagaggtggtggtggaggacgctgccgcggcggcggtggcggggacgggagcgggagggggggaggaggggaggatgcggatggaggggtggctgtacctgatccgatccaaccgcctcggcctgcagtactcgcggaagaggtacttcgtgctcgaggacgccgcgctccgctgcttcaaggccccgccgccgccctcctcctcctcctcctcctcctccaagcgcgaggtgactctctctctctctctctctctctcgtactctgttcttaatccgtgcatttttggtgcccccgtgagatcctactggtgttcgtcccccgttccgcgaaattttagtttcggtttttaatttcgatagcgatttcatcccccccggtgtgtgctggtaggaggtagtagtagattagatacgctccggatgctggtcgttgtctctcccgagggggagttattgtttccgttttttaacggccgggttggttgagatgaatcatgaatgcttcatgctcgcgcgcggcgcggccagtaattgcaatcgcgcggttgattcgtcacgacgcagcgctagttgcttctgcgaattcagagtaagtgacaggatggttagagtggtacgacgattccgccttagctgcctcgaaatgttgccgcgttaggtttgcttaatatccctttcacggaaaaaaagaagaatggttgctgggacagtgaggatcacctaagcagtatggaggaatggaagtggagccaaccgtagcattgaaccaaaagcaagagatggttatagtaatggcatggtgtgagaatatggcatatgtgatagcgtgcagttgggtgaagtgaactctagagtggcttccatttctgtctaatgggagcttatgaagctgtcatatttcagtaacatggtgtacaattcaagtgtgttaagctctgctttctcagctccactcgttatgccattgctgcattgctttggggttcttaccatggattccaaggaaaaccagcaagtcattttgatgtgactgcatcatgcttacagaaggaaaaaaggagggcatcttttctacttcttcttctttttgggctgtggggtgttaagtaaagtgtgcaaacttgtatatatatggggagggcgtaatgatcatacataatttgtaccaagcctctttttttttttgatacggtaccaagcctttgtttgcaacatgaaaacctctacgaattgatccaatacctttaattagtggaacaagcctttttagaaaagaaacagtgcaaagtttggctgctccactcctatcaattccgtgttcttatgaaacatggtaccatgctttttgctaacatttcccttttgggtacaggatcctgttagaagtgcaataattgattcttgtatacgtgtcacagacaatgggagagaaagtgttcatagaagtgtaagcccatatttttattactgtttttaccatctttaccaaaaagttacacagacaacatttgattatcttcctcaccattttattgacaggttttttacatattcacactctacaatgcctctaatcattatgatcaacttaaggtaaccactagtgttgactcacctaatctgaccttggagctattttttttttgtacttagtgaaaataagattagttctcatcaaccaatgcttttcagttgggtgctcgaagttcagaggaagccgctaggtggatcaggtgtttgatggagtctgccttaaaggttggagtttttcttatttattttatttcacacaatcattatgttcaaaaaagcactaacatgatatctgtcatgtgagcagtccccaagaaaagatgagcatattgttgcttgttcacatagaagatggcaagcttttaggtaagctgctatgcagatcaatctttattttgtcaattactcagcaatggactggagattaatgcactgtttatttattgagaaatgctcatacagttagactcccccttttcttttctttcctttttcagtttataaagtttttcctctttttgtatcttttgtcactgaaaacaatatgcaaattgtgaaggctactgtcaaatgtttggcacacatttgataaagtttccaaattatctaccattgtgctagccctcttttttgaaaggcataacctcttgttagtgctggaaacaatcagtagttatggctgtatgaaatgccatgagatcatttagtttagattgaataattgaactaaataattctactgtttttaaatgggatgcagcacatgctcgtgctttcaagtgctctagatttgcttcaataaatggagatatataagagatcaatgatgcctatatgtaattttatagatcaccttttctttttttgtaaacatataattaatcatatgattgatgctacatataattaatcatatgattgatgctttgttctgagtttgactgctagcatctacagtcctatgctacatcctctgttgtacatatttggatagaagtttcattttcttcatcacttggattgacgtttaattataataagaaagtacccaactgtccttgttctattggctaatcggagactatatctttgcaggctaagccgccgcagtaaccgcatgcactcaataggtaactatcgtcttataatgtactccctctctaaaataaacaaaattctagaaatgttataatcaagtttttctaataatggctattaataatgtatataaatttttcagcttgatcattttaaatggtatctttagattcttttcatgaaaaatcattttcacataaaataatcaacacatgaatattgaaagtgagagtaaaagtttcttcttggaggctgtaaaatggcaaaattgagtaaatattcttaaattaagggagcaagacgaaattatagtactacttttagtgattcaattaactatctttatttcttattttacctttctgtgcaaaactctaccagattggactgtattttcttctgtccataacgatcctatggcatctgatgttattgcgccttctccatggacaatatttggctgcaaaaatggtaagcataaaaaaaatctcctttctttacatcactggattttgcgctgaatccgacttgcatttaggattgcgtttgtttactgaggcaaaggatggtggttcagaggggaaggtaattcttgttctcagaaataatgtgttgtgtggactgtggatggattatgaaattcaccatgattttgcttttttttttctcagtattgggatgatcatccagctataatggctgttggtgttgttgatgcgaattctgaggctgtattccagactgtaatgtcccttggtcaatcaagatcagagtaagatatatcatccctctttgccgtatatcatttgctctgcaccattgcaaaaataatatgcattgctatcacaaaagtacatgccatttcaattaatgcgttataggcataactatcattgtcttttcatcttctttcaacccgttaacctgccagatttttgtaggtgggacttctgtttgcaggaagggagggtggtggagcatatagatggtcatacagatataatccacaagaaattaagagacggctggttaccatggtctggtgctggatttattctaccttttcatatgcacactttattgttcatttataatattatgatatttagttttcaggggaatgagaaagagggatctattacttaggcgatattggaggagagaagacgatgggacttatggtacatttgttgacagaaactgataaataatctgaatccatgatttagacctgacatcccacttgaaaattttcagttattctataccactctgttttccactacagatgccgttctgagagaggctatgtccgtgcatgtcttaaaagtaatgtatgctttatttctgcttagtcaatgtgatagctacaaactggttgttgtcttaatttataatgaaccaatatgtcttttatgaataataggtggaggatatgtaatatcgccagtcaatcaaggaaaacaatcggttgtgaagcatatgcttgctatagattggaaattctggaagtcttatctgtttaccgcatctgcaaaacacatcactatacgcatgctaggaagagtagcaggcaagtcttgtgatgcatcaataaaccattgcctgatgtgttttatcaaacttcattctgcaaattttcatattattctgagctaacttacctttataagcagccctgcgggaattcttccgagcaaaaaatggaaattgtgcttgcatagagttctcgtcaggtgagttgacaagggatatgcgtctgcaacaaggtgaaaatgagcggataaaaatcgaaatgctgtcagcaagtgaaaataacaggctagaagatcctacagaaggatcactgggtggttctaatagacacttaagtagcgctggttccttcattcaactgaacgatgcagcggatgagttttttgatgtcccggatgattcagaatatgatcaaagagaagccatgtggccttccgatgagagcacacattctgtggtgagttagacaggcttgcattttgtttttaaatgtagaagtctgtcaacctattaacgtcgtgtgtaactttgtctgaacataccttttcttttctgcatcacggtctcagcaagccaaaaatgtgcatgttcttgacaaggtgtaatgttttagttagaagtaagaaacaataatttggttacaaagaacatcgatgttagcataacgttgagaactagaccaatatatctcttatatcaattcaacatctcgtgtatctaatatatggtataatagcaggaccaacgacatgctaaattgtccaccgctgctgtcttcgtaaaaaagttgcatgatcttgcaggtgtgttacatcttctatacagttatggtgttttctttttccactttgttctaattattactctcccatttcctctattctagtgcaaaagagaggatatgttgacttacaaggagctgctgatttcgataatggtccattttgctatggatatactcttccaaaagattcgaactgtacaatgccttctacttgggcaatgacagatcctacaacattcttaatccgaggggagtcatatttgcaggatcgtctaaaggtagctttataatgtttggattcttagaccagttcactaggctagggtgcaaggcttttggtctataggaaataaggactggctttccttctttgggggaaataattatgcttctgttttaagtacctcgtcataatgaagaactatgagcattattttctgataattcttatattactgactaatatgatagtactgagtggcagtagtgcaggatttggaaaacaaaaaaatcctcccaagaatttcctaaatttggccaatttggatggcaattttatactgttattgttagatccactgctcgagtcaaatgtattaaaataactcaaactgaaactttagttacaacagaccaactgaaaatattaccggattagagctccaatttggcaaattctgtttattttcttttgggattgtaaattatttaagcagactccagccatgtagactggttgatgcatataaggaaactggattatttcatgctttcctaataataaaatccacaatggtcatgaagtaattgtctacaactgttacctgatttgggtgttattcaaaatgaagcactaattaccagacggagattttgagacaatgtatcactagagacaactaatatagctactataagaaacctgcgatgctatgatttggtctatttgctccctctatgtaagtctggtaggagaactttctaatctggccagcacaatagtagtctatgttggagaggtttttcccattcgtaactctctaatccattcaaatgttttctgtgatttttacagatcaaggcaaacaatacattgatgcaaatggtaggtgctgactggataaaatctgataagcgtgaagatgaccttgctggccgccctggaggactagtacaggtatattttcttaaagccagtaattttccttcaacggcaaaaggaaccgagaattttaccaagagttatattgcagaaatgtgcagcacaagggggcaacaaattcttttttatcgttaacatacaggtgggattttcattagctatacatacatattggggcctcatgtgatttacaacaacatgcctttttacttatgaccctgatggatataggttcctggttcatccacatacagcttagccttgtattatatgatggataccccattggaaaaggttcctctacttgaaagatttgtaaatggagatgacgcattcagaaattcaaggttcaaactcatcccgtacatctcaaaggtacctattctgcactaccagccttcattcttgtcaagctttacttagtaaatgctgatggtttatcttcggtatatgtgccgcttcaggggtcttggatagtaaagcaaagtgtgggaaagaaagcctgtttggttggtcaagcactagagatcaattatttccgtggaagcaattatttggaggtaaaccctcagcatgacatgtatctccattagtttctcatttcattccgtcatcagaattcagatgcttggtgtgacaatgccatacttactggcttcaataagcagtttatccaaagcattatgtctcacttacaaatagcgcagaataacaatggattgaattttagctactgttgccacttacttgcgcttacggttgacttcatttaccacaatctacgactagcgttacaaagattgtctgaaataaatcgtggcgtaatgaatctgccattctgtttggtacatccagctctgaatatctttacatgcatttttcagcttggagttgatataggctcgtcaacagttgcacggggtgtggtgagccttgtgcttggctacttgaacaacctggtgattgaaatggccttcctggtacaggtaattgtggcatatctaatcaagtaattacacaacgagcttgatgtttcttttacttctcaagattcagaacagtgctgtttcttttttcctttaatgagataaaagattcagaatggatcagtaaatagtgctatgagatgagagtttcagaattgctcttttccttcTttttttttttgagatgagagatcagtaaataacacagctgaacaacctcatgaaagaactccttgattccttcctactatcatgaaacaaaaccctgtttgtgtcgtgcagggcaacacgcaagaagagctcccggagttcctcctgggcacctgccgactgaactacctcgacgcgtccaaggcagtgtccatagacgagtgctgaaggcgtcatcagccaccattgaccccgccaacattctttctgaggccaattacagtagtacagcgaaccaaggaaaaaaagaggctcaagtcattcgtttcccctgccggccccggtccaaagatactccttgtattgctccacacaaaagccgaagaattctggcttattctgcctgcctgccagcactgtacattctcctcttgccgacaggtattgcgatgtaatgatgatagcaatctacgcccattctttggcatgccatcatcgagaaaaagagaaagggaagtgtatcctaacggtgacccccgtggcgttcattctgacctgggactcgtctcagcttactgtgagtagtgagattgcatcattagatccaactccaaagcaacccattaccggacacttgactactcctcctgttccataatatttctcctgagttcgagtgagtggtggcagccatgattataccagagggactcgtcaacaactgaaagcgaccaaagtcacagggattgatatactatgctcctaccattggtaaggaaggaacacccaggcagacgcactcacaacccaaaccctttctttttgcctagtcacttgagctagaagggagggacggaacatgagcaagtggagccggcatttccctttgttcttgagaaaagacaggacatgcaaactatgcttaaggcagggacggatagagatgatggtgtgtgtcgccgtcgcaaagcggcgagacatcgtgtggtcgagatcgctgtgcgtcgtccgtcgtctgcgtgcttggctagctaacctaaaactaaaaggcttccgtctgcccgtgcaccccgtcgccgctgtagcagccgacgtgacagatgaaccgatctctcctgcattttttgctcacacaaattctgtaccactagtagtagtttgccgcgtcatcgcttcgaaatggagagagagattagtgtggggagaagtatatttaagtggacacttgcagggttagacag
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| CDS seq | atgatgggaggggtggcggcagaggtggtggtggaggacgctgccgcggcggcggtggcggggacgggagcgggagggggggaggaggggaggatgcggatggaggggtggctgtacctgatccgatccaaccgcctcggcctgcagtactcgcggaagaggtacttcgtgctcgaggacgccgcgctccgctgcttcaaggccccgccgccgccctcctcctcctcctcctcctcctccaagcgcgaggatcctgttagaagtgcaataattgattcttgtatacgtgtcacagacaatgggagagaaagtgttcatagaagtgttttttacatattcacactctacaatgcctctaatcattatgatcaacttaagttgggtgctcgaagttcagaggaagccgctaggtggatcaggtgtttgatggagtctgccttaaagtccccaagaaaagatgagcatattgttgcttgttcacatagaagatggcaagcttttaggctaagccgccgcagtaaccgcatgcactcaatagattggactgtattttcttctgtccataacgatcctatggcatctgatgttattgcgccttctccatggacaatatttggctgcaaaaatggattgcgtttgtttactgaggcaaaggatggtggttcagaggggaagtattgggatgatcatccagctataatggctgttggtgttgttgatgcgaattctgaggctgtattccagactgtaatgtcccttggtcaatcaagatcagagtgggacttctgtttgcaggaagggagggtggtggagcatatagatggtcatacagatataatccacaagaaattaagagacggctggttaccatggggaatgagaaagagggatctattacttaggcgatattggaggagagaagacgatgggacttatgatgccgttctgagagaggctatgtccgtgcatgtcttaaaagtaatgtatgctttatttctgcttagtcaatgtggaggatatgtaatatcgccagtcaatcaaggaaaacaatcggttgtgaagcatatgcttgctatagattggaaattctggaagtcttatctgtttaccgcatctgcaaaacacatcactatacgcatgctaggaagagtagcaggcaagtcttccctgcgggaattcttccgagcaaaaaatggaaattgtgcttgcatagagttctcgtcaggtgagttgacaagggatatgcgtctgcaacaaggtgaaaatgagcggataaaaatcgaaatgctgtcagcaagtgaaaataacaggctagaagatcctacagaaggatcactgggtggttctaatagacacttaagtagcgctggttccttcattcaactgaacgatgcagcggatgagttttttgatgtcccggatgattcagaatatgatcaaagagaagccatgtggccttccgatgagagcacacattctgtggaccaacgacatgctaaattgtccaccgctgctgtcttcgtaaaaaagttgcatgatcttgcagtgcaaaagagaggatatgttgacttacaaggagctgctgatttcgataatggtccattttgctatggatatactcttccaaaagattcgaactgtacaatgccttctacttgggcaatgacagatcctacaacattcttaatccgaggggagtcatatttgcaggatcgtctaaagatcaaggcaaacaatacattgatgcaaatggtaggtgctgactggataaaatctgataagcgtgaagatgaccttgctggccgccctggaggactagtacaggttcctggttcatccacatacagcttagccttgtattatatgatggataccccattggaaaaggttcctctacttgaaagatttgtaaatggagatgacgcattcagaaattcaaggttcaaactcatcccgtacatctcaaaggggtcttggatagtaaagcaaagtgtgggaaagaaagcctgtttggttggtcaagcactagagatcaattatttccgtggaagcaattatttggagcttggagttgatataggctcgtcaacagttgcacggggtgtggtgagccttgtgcttggctacttgaacaacctggtgattgaaatggccttcctggtacagggcaacacgcaagaagagctcccggagttcctcctgggcacctgccgactgaactacctcgacgcgtccaaggcagtgtccatagacgagtgctga
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| Protein seq | MMGGVAAEVVVEDAAAAAVAGTGAGGGEEGRMRMEGWLYLIRSNRLGLQYSRKRYFVLEDAALRCFKAPPPPSSSSSSSSKREDPVRSAIIDSCIRVTDNGRESVHRSVFYIFTLYNASNHYDQLKLGARSSEEAARWIRCLMESALKSPRKDEHIVACSHRRWQAFRLSRRSNRMHSIDWTVFSSVHNDPMASDVIAPSPWTIFGCKNGLRLFTEAKDGGSEGKYWDDHPAIMAVGVVDANSEAVFQTVMSLGQSRSEWDFCLQEGRVVEHIDGHTDIIHKKLRDGWLPWGMRKRDLLLRRYWRREDDGTYDAVLREAMSVHVLKVMYALFLLSQCGGYVISPVNQGKQSVVKHMLAIDWKFWKSYLFTASAKHITIRMLGRVAGKSSLREFFRAKNGNCACIEFSSGELTRDMRLQQGENERIKIEMLSASENNRLEDPTEGSLGGSNRHLSSAGSFIQLNDAADEFFDVPDDSEYDQREAMWPSDESTHSVDQRHAKLSTAAVFVKKLHDLAVQKRGYVDLQGAADFDNGPFCYGYTLPKDSNCTMPSTWAMTDPTTFLIRGESYLQDRLKIKANNTLMQMVGADWIKSDKREDDLAGRPGGLVQVPGSSTYSLALYYMMDTPLEKVPLLERFVNGDDAFRNSRFKLIPYISKGSWIVKQSVGKKACLVGQALEINYFRGSNYLELGVDIGSSTVARGVVSLVLGYLNNLVIEMAFLVQGNTQEELPEFLLGTCRLNYLDASKAVSIDEC |
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| Function | Protein ENHANCED DISEASE RESISTANCE 2-like [UniProtKB/Swiss-Prot:Q8VZF6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_10g0014440 | OsCMeo_10g0014440.03 | Chr10 | 18562500 | 18571010 | + | NAM | ||
| CDS seq | atgatgggaggggtggcggcagaggtggtggtggaggacgctgccgcggcggcggtggcggggacgggagcgggagggggggaggaggggaggatgcggatggaggggtggctgtacctgatccgatccaaccgcctcggcctgcagtactcgcggaagaggtacttcgtgctcgaggacgccgcgctccgctgcttcaaggccccgccgccgccctcctcctcctcctcctcctcctccaagcgcgaggatcctgttagaagtgcaataattgattcttgtatacgtgtcacagacaatgggagagaaagtgttcatagaagtgttttttacatattcacactctacaatgcctctaatcattatgatcaacttaagttgggtgctcgaagttcagaggaagccgctaggtggatcaggtgtttgatggagtctgccttaaagtccccaagaaaagatgagcatattgttgcttgttcacatagaagatggcaagcttttaggctaagccgccgcagtaaccgcatgcactcaatagattggactgtattttcttctgtccataacgatcctatggcatctgatgttattgcgccttctccatggacaatatttggctgcaaaaatggattgcgtttgtttactgaggcaaaggatggtggttcagaggggaagtattgggatgatcatccagctataatggctgttggtgttgttgatgcgaattctgaggctgtattccagactgtaatgtcccttggtcaatcaagatcagagggaatgagaaagagggatctattacttaggcgatattggaggagagaagacgatgggacttatggtggaggatatgtaatatcgccagtcaatcaaggaaaacaatcggttgtgaagcatatgcttgctatagattggaaattctggaagtcttatctgtttaccgcatctgcaaaacacatcactatacgcatgctaggaagagtagcaggcaagtcttccctgcgggaattcttccgagcaaaaaatggaaattgtgcttgcatagagttctcgtcaggtgagttgacaagggatatgcgtctgcaacaaggtgaaaatgagcggataaaaatcgaaatgctgtcagcaagtgaaaataacaggctagaagatcctacagaaggatcactgggtggttctaatagacacttaagtagcgctggttccttcattcaactgaacgatgcagcggatgagttttttgatgtcccggatgattcagaatatgatcaaagagaagccatgtggccttccgatgagagcacacattctgtggaccaacgacatgctaaattgtccaccgctgctgtcttcgtaaaaaagttgcatgatcttgcagtgcaaaagagaggatatgttgacttacaaggagctgctgatttcgataatggtccattttgctatggatatactcttccaaaagattcgaactgtacaatgccttctacttgggcaatgacagatcctacaacattcttaatccgaggggagtcatatttgcaggatcgtctaaagatcaaggcaaacaatacattgatgcaaatggtaggtgctgactggataaaatctgataagcgtgaagatgaccttgctggccgccctggaggactagtacaggttcctggttcatccacatacagcttagccttgtattatatgatggataccccattggaaaaggttcctctacttgaaagatttgtaaatggagatgacgcattcagaaattcaaggttcaaactcatcccgtacatctcaaaggggtcttggatagtaaagcaaagtgtgggaaagaaagcctgtttggttggtcaagcactagagatcaattatttccgtggaagcaattatttggagcttggagttgatataggctcgtcaacagttgcacggggtgtggtgagccttgtgcttggctacttgaacaacctggtgattgaaatggccttcctggtacagggcaacacgcaagaagagctcccggagttcctcctgggcacctgccgactgaactacctcgacgcgtccaaggcagtgtccatagacgagtgctga
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| Protein seq | MMGGVAAEVVVEDAAAAAVAGTGAGGGEEGRMRMEGWLYLIRSNRLGLQYSRKRYFVLEDAALRCFKAPPPPSSSSSSSSKREDPVRSAIIDSCIRVTDNGRESVHRSVFYIFTLYNASNHYDQLKLGARSSEEAARWIRCLMESALKSPRKDEHIVACSHRRWQAFRLSRRSNRMHSIDWTVFSSVHNDPMASDVIAPSPWTIFGCKNGLRLFTEAKDGGSEGKYWDDHPAIMAVGVVDANSEAVFQTVMSLGQSRSEGMRKRDLLLRRYWRREDDGTYGGGYVISPVNQGKQSVVKHMLAIDWKFWKSYLFTASAKHITIRMLGRVAGKSSLREFFRAKNGNCACIEFSSGELTRDMRLQQGENERIKIEMLSASENNRLEDPTEGSLGGSNRHLSSAGSFIQLNDAADEFFDVPDDSEYDQREAMWPSDESTHSVDQRHAKLSTAAVFVKKLHDLAVQKRGYVDLQGAADFDNGPFCYGYTLPKDSNCTMPSTWAMTDPTTFLIRGESYLQDRLKIKANNTLMQMVGADWIKSDKREDDLAGRPGGLVQVPGSSTYSLALYYMMDTPLEKVPLLERFVNGDDAFRNSRFKLIPYISKGSWIVKQSVGKKACLVGQALEINYFRGSNYLELGVDIGSSTVARGVVSLVLGYLNNLVIEMAFLVQGNTQEELPEFLLGTCRLNYLDASKAVSIDEC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_10g0014440 | OsCMeo_10g0014440.01 | Chr10 | 18562324 | 18571010 | + | NAM | ||
| CDS seq | atgatgggaggggtggcggcagaggtggtggtggaggacgctgccgcggcggcggtggcggggacgggagcgggagggggggaggaggggaggatgcggatggaggggtggctgtacctgatccgatccaaccgcctcggcctgcagtactcgcggaagaggtacttcgtgctcgaggacgccgcgctccgctgcttcaaggccccgccgccgccctcctcctcctcctcctcctcctccaagcgcgaggatcctgttagaagtgcaataattgattcttgtatacgtgtcacagacaatgggagagaaagtgttcatagaagtgttttttacatattcacactctacaatgcctctaatcattatgatcaacttaagttgggtgctcgaagttcagaggaagccgctaggtggatcaggtgtttgatggagtctgccttaaagtccccaagaaaagatgagcatattgttgcttgttcacatagaagatggcaagcttttaggctaagccgccgcagtaaccgcatgcactcaatagattggactgtattttcttctgtccataacgatcctatggcatctgatgttattgcgccttctccatggacaatatttggctgcaaaaatggattgcgtttgtttactgaggcaaaggatggtggttcagaggggaagtattgggatgatcatccagctataatggctgttggtgttgttgatgcgaattctgaggctgtattccagactgtaatgtcccttggtcaatcaagatcagagtgggacttctgtttgcaggaagggagggtggtggagcatatagatggtcatacagatataatccacaagaaattaagagacggctggttaccatggggaatgagaaagagggatctattacttaggcgatattggaggagagaagacgatgggacttatgatgccgttctgagagaggctatgtccgtgcatgtcttaaaagtaatgtatgctttatttctgcttagtcaatgtggaggatatgtaatatcgccagtcaatcaaggaaaacaatcggttgtgaagcatatgcttgctatagattggaaattctggaagtcttatctgtttaccgcatctgcaaaacacatcactatacgcatgctaggaagagtagcaggcaagtcttccctgcgggaattcttccgagcaaaaaatggaaattgtgcttgcatagagttctcgtcaggtgagttgacaagggatatgcgtctgcaacaaggtgaaaatgagcggataaaaatcgaaatgctgtcagcaagtgaaaataacaggctagaagatcctacagaaggatcactgggtggttctaatagacacttaagtagcgctggttccttcattcaactgaacgatgcagcggatgagttttttgatgtcccggatgattcagaatatgatcaaagagaagccatgtggccttccgatgagagcacacattctgtggaccaacgacatgctaaattgtccaccgctgctgtcttcgtaaaaaagttgcatgatcttgcagtgcaaaagagaggatatgttgacttacaaggagctgctgatttcgataatggtccattttgctatggatatactcttccaaaagattcgaactgtacaatgccttctacttgggcaatgacagatcctacaacattcttaatccgaggggagtcatatttgcaggatcgtctaaagatcaaggcaaacaatacattgatgcaaatggtaggtgctgactggataaaatctgataagcgtgaagatgaccttgctggccgccctggaggactagtacaggttcctggttcatccacatacagcttagccttgtattatatgatggataccccattggaaaaggttcctctacttgaaagatttgtaaatggagatgacgcattcagaaattcaaggttcaaactcatcccgtacatctcaaaggggtcttggatagtaaagcaaagtgtgggaaagaaagcctgtttggttggtcaagcactagagatcaattatttccgtggaagcaattatttggagcttggagttgatataggctcgtcaacagttgcacggggtgtggtgagccttgtgcttggctacttgaacaacctggtgattgaaatggccttcctggtacagggcaacacgcaagaagagctcccggagttcctcctgggcacctgccgactgaactacctcgacgcgtccaaggcagtgtccatagacgagtgctga
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| Protein seq | MMGGVAAEVVVEDAAAAAVAGTGAGGGEEGRMRMEGWLYLIRSNRLGLQYSRKRYFVLEDAALRCFKAPPPPSSSSSSSSKREDPVRSAIIDSCIRVTDNGRESVHRSVFYIFTLYNASNHYDQLKLGARSSEEAARWIRCLMESALKSPRKDEHIVACSHRRWQAFRLSRRSNRMHSIDWTVFSSVHNDPMASDVIAPSPWTIFGCKNGLRLFTEAKDGGSEGKYWDDHPAIMAVGVVDANSEAVFQTVMSLGQSRSEWDFCLQEGRVVEHIDGHTDIIHKKLRDGWLPWGMRKRDLLLRRYWRREDDGTYDAVLREAMSVHVLKVMYALFLLSQCGGYVISPVNQGKQSVVKHMLAIDWKFWKSYLFTASAKHITIRMLGRVAGKSSLREFFRAKNGNCACIEFSSGELTRDMRLQQGENERIKIEMLSASENNRLEDPTEGSLGGSNRHLSSAGSFIQLNDAADEFFDVPDDSEYDQREAMWPSDESTHSVDQRHAKLSTAAVFVKKLHDLAVQKRGYVDLQGAADFDNGPFCYGYTLPKDSNCTMPSTWAMTDPTTFLIRGESYLQDRLKIKANNTLMQMVGADWIKSDKREDDLAGRPGGLVQVPGSSTYSLALYYMMDTPLEKVPLLERFVNGDDAFRNSRFKLIPYISKGSWIVKQSVGKKACLVGQALEINYFRGSNYLELGVDIGSSTVARGVVSLVLGYLNNLVIEMAFLVQGNTQEELPEFLLGTCRLNYLDASKAVSIDEC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_10g0014440 | OsCMeo_10g0014440.04 | Chr10 | 18562500 | 18571010 | + | NAM | ||
| CDS seq | atgatgggaggggtggcggcagaggtggtggtggaggacgctgccgcggcggcggtggcggggacgggagcgggagggggggaggaggggaggatgcggatggaggggtggctgtacctgatccgatccaaccgcctcggcctgcagtactcgcggaagaggtacttcgtgctcgaggacgccgcgctccgctgcttcaaggccccgccgccgccctcctcctcctcctcctcctcctccaagcgcgaggatcctgttagaagtgcaataattgattcttgtatacgtgtcacagacaatgggagagaaagtgttcatagaagtgttttttacatattcacactctacaatgcctctaatcattatgatcaacttaagttgggtgctcgaagttcagaggaagccgctaggtggatcaggtgtttgatggagtctgccttaaagtccccaagaaaagatgagcatattgttgcttgttcacatagaagatggcaagcttttaggctaagccgccgcagtaaccgcatgcactcaatagattggactgtattttcttctgtccataacgatcctatggcatctgatgttattgcgccttctccatggacaatatttggctgcaaaaatggattgcgtttgtttactgaggcaaaggatggtggttcagaggggaagtattgggatgatcatccagctataatggctgttggtgttgttgatgcgaattctgaggctgtattccagactgtaatgtcccttggtcaatcaagatcagagtgggacttctgtttgcaggaagggagggtggtggagcatatagatggtcatacagatataatccacaagaaattaagagacggctggttaccatggggaatgagaaagagggatctattacttaggcgatattggaggagagaagacgatgggacttatgttattctataccactctgttttccactacagatgccgttctgagagaggctatgtccgtgcatgtcttaaaagtggaggatatgtaatatcgccagtcaatcaaggaaaacaatcggttgtgaagcatatgcttgctatagattggaaattctggaagtcttatctgtttaccgcatctgcaaaacacatcactatacgcatgctaggaagagtagcaggcaagtcttccctgcgggaattcttccgagcaaaaaatggaaattgtgcttgcatagagttctcgtcaggtgagttgacaagggatatgcgtctgcaacaaggtgaaaatgagcggataaaaatcgaaatgctgtcagcaagtgaaaataacaggctagaagatcctacagaaggatcactgggtggttctaatagacacttaagtagcgctggttccttcattcaactgaacgatgcagcggatgagttttttgatgtcccggatgattcagaatatgatcaaagagaagccatgtggccttccgatgagagcacacattctgtggaccaacgacatgctaaattgtccaccgctgctgtcttcgtaaaaaagttgcatgatcttgcagtgcaaaagagaggatatgttgacttacaaggagctgctgatttcgataatggtccattttgctatggatatactcttccaaaagattcgaactgtacaatgccttctacttgggcaatgacagatcctacaacattcttaatccgaggggagtcatatttgcaggatcgtctaaagatcaaggcaaacaatacattgatgcaaatggtaggtgctgactggataaaatctgataagcgtgaagatgaccttgctggccgccctggaggactagtacaggttcctggttcatccacatacagcttagccttgtattatatgatggataccccattggaaaaggttcctctacttgaaagatttgtaaatggagatgacgcattcagaaattcaaggttcaaactcatcccgtacatctcaaaggggtcttggatagtaaagcaaagtgtgggaaagaaagcctgtttggttggtcaagcactagagatcaattatttccgtggaagcaattatttggagcttggagttgatataggctcgtcaacagttgcacggggtgtggtgagccttgtgcttggctacttgaacaacctggtgattgaaatggccttcctggtacagggcaacacgcaagaagagctcccggagttcctcctgggcacctgccgactgaactacctcgacgcgtccaaggcagtgtccatagacgagtgctga
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| Protein seq | MMGGVAAEVVVEDAAAAAVAGTGAGGGEEGRMRMEGWLYLIRSNRLGLQYSRKRYFVLEDAALRCFKAPPPPSSSSSSSSKREDPVRSAIIDSCIRVTDNGRESVHRSVFYIFTLYNASNHYDQLKLGARSSEEAARWIRCLMESALKSPRKDEHIVACSHRRWQAFRLSRRSNRMHSIDWTVFSSVHNDPMASDVIAPSPWTIFGCKNGLRLFTEAKDGGSEGKYWDDHPAIMAVGVVDANSEAVFQTVMSLGQSRSEWDFCLQEGRVVEHIDGHTDIIHKKLRDGWLPWGMRKRDLLLRRYWRREDDGTYVILYHSVFHYRCRSERGYVRACLKSGGYVISPVNQGKQSVVKHMLAIDWKFWKSYLFTASAKHITIRMLGRVAGKSSLREFFRAKNGNCACIEFSSGELTRDMRLQQGENERIKIEMLSASENNRLEDPTEGSLGGSNRHLSSAGSFIQLNDAADEFFDVPDDSEYDQREAMWPSDESTHSVDQRHAKLSTAAVFVKKLHDLAVQKRGYVDLQGAADFDNGPFCYGYTLPKDSNCTMPSTWAMTDPTTFLIRGESYLQDRLKIKANNTLMQMVGADWIKSDKREDDLAGRPGGLVQVPGSSTYSLALYYMMDTPLEKVPLLERFVNGDDAFRNSRFKLIPYISKGSWIVKQSVGKKACLVGQALEINYFRGSNYLELGVDIGSSTVARGVVSLVLGYLNNLVIEMAFLVQGNTQEELPEFLLGTCRLNYLDASKAVSIDEC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_10g0014440 | OsCMeo_10g0014440.02 | Chr10 | 18562500 | 18571010 | + | NAM | ||
| CDS seq | atgatgggaggggtggcggcagaggtggtggtggaggacgctgccgcggcggcggtggcggggacgggagcgggagggggggaggaggggaggatgcggatggaggggtggctgtacctgatccgatccaaccgcctcggcctgcagtactcgcggaagaggtacttcgtgctcgaggacgccgcgctccgctgcttcaaggccccgccgccgccctcctcctcctcctcctcctcctccaagcgcgaggatcctgttagaagtgcaataattgattcttgtatacgtgtcacagacaatgggagagaaagtgttcatagaagtgttttttacatattcacactctacaatgcctctaatcattatgatcaacttaagttgggtgctcgaagttcagaggaagccgctaggtggatcaggtgtttgatggagtctgccttaaagtccccaagaaaagatgagcatattgttgcttgttcacatagaagatggcaagcttttaggctaagccgccgcagtaaccgcatgcactcaatagattggactgtattttcttctgtccataacgatcctatggcatctgatgttattgcgccttctccatggacaatatttggctgcaaaaatggattgcgtttgtttactgaggcaaaggatggtggttcagaggggaagtattgggatgatcatccagctataatggctgttggtgttgttgatgcgaattctgaggctgtattccagactgtaatgtcccttggtcaatcaagatcagagggaatgagaaagagggatctattacttaggcgatattggaggagagaagacgatgggacttatggtggaggatatgtaatatcgccagtcaatcaaggaaaacaatcggttgtgaagcatatgcttgctatagattggaaattctggaagtcttatctgtttaccgcatctgcaaaacacatcactatacgcatgctaggaagagtagcaggcaagtcttccctgcgggaattcttccgagcaaaaaatggaaattgtgcttgcatagagttctcgtcaggtgagttgacaagggatatgcgtctgcaacaaggtgaaaatgagcggataaaaatcgaaatgctgtcagcaagtgaaaataacaggctagaagatcctacagaaggatcactgggtggttctaatagacacttaagtagcgctggttccttcattcaactgaacgatgcagcggatgagttttttgatgtcccggatgattcagaatatgatcaaagagaagccatgtggccttccgatgagagcacacattctgtggaccaacgacatgctaaattgtccaccgctgctgtcttcgtaaaaaagttgcatgatcttgcagtgcaaaagagaggatatgttgacttacaaggagctgctgatttcgataatggtccattttgctatggatatactcttccaaaagattcgaactgtacaatgccttctacttgggcaatgacagatcctacaacattcttaatccgaggggagtcatatttgcaggatcgtctaaagatcaaggcaaacaatacattgatgcaaatggtaggtgctgactggataaaatctgataagcgtgaagatgaccttgctggccgccctggaggactagtacagaaatgtgcagcacaagggggcaacaaattcttttttatcgttaacatacaggttcctggttcatccacatacagcttagccttgtattatatgatggataccccattggaaaaggttcctctacttgaaagatttgtaaatggagatgacgcattcagaaattcaaggttcaaactcatcccgtacatctcaaaggggtcttggatagtaaagcaaagtgtgggaaagaaagcctgtttggttggtcaagcactagagatcaattatttccgtggaagcaattatttggagcttggagttgatataggctcgtcaacagttgcacggggtgtggtgagccttgtgcttggctacttgaacaacctggtgattgaaatggccttcctggtacagggcaacacgcaagaagagctcccggagttcctcctgggcacctgccgactgaactacctcgacgcgtccaaggcagtgtccatagacgagtgctga
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| Protein seq | MMGGVAAEVVVEDAAAAAVAGTGAGGGEEGRMRMEGWLYLIRSNRLGLQYSRKRYFVLEDAALRCFKAPPPPSSSSSSSSKREDPVRSAIIDSCIRVTDNGRESVHRSVFYIFTLYNASNHYDQLKLGARSSEEAARWIRCLMESALKSPRKDEHIVACSHRRWQAFRLSRRSNRMHSIDWTVFSSVHNDPMASDVIAPSPWTIFGCKNGLRLFTEAKDGGSEGKYWDDHPAIMAVGVVDANSEAVFQTVMSLGQSRSEGMRKRDLLLRRYWRREDDGTYGGGYVISPVNQGKQSVVKHMLAIDWKFWKSYLFTASAKHITIRMLGRVAGKSSLREFFRAKNGNCACIEFSSGELTRDMRLQQGENERIKIEMLSASENNRLEDPTEGSLGGSNRHLSSAGSFIQLNDAADEFFDVPDDSEYDQREAMWPSDESTHSVDQRHAKLSTAAVFVKKLHDLAVQKRGYVDLQGAADFDNGPFCYGYTLPKDSNCTMPSTWAMTDPTTFLIRGESYLQDRLKIKANNTLMQMVGADWIKSDKREDDLAGRPGGLVQKCAAQGGNKFFFIVNIQVPGSSTYSLALYYMMDTPLEKVPLLERFVNGDDAFRNSRFKLIPYISKGSWIVKQSVGKKACLVGQALEINYFRGSNYLELGVDIGSSTVARGVVSLVLGYLNNLVIEMAFLVQGNTQEELPEFLLGTCRLNYLDASKAVSIDEC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_10g0014440 | OsCMeo_10g0014440.05 | Chr10 | 18566594 | 18570322 | + | IsoSeq | ||
| CDS seq | atgcagcggatgagttttttgatgtcccggatgattcagaatatgatcaaagagaagccatgtggccttccgatgagagcacacattctgtggaccaacgacatgctaaattgtccaccgctgctgtct |
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| Protein seq | MQRMSFLMSRMIQNMIKEKPCGLPMRAHILWTNDMLNCPPLLS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr10 | 18566332 | 18566440 | + | OsCMeo_10g0014440.04 | OsCMeo_10g0014440.01,OsCMeo_10g0014440.04 | All |
| SE | Chr10 | 18565923 | 18566268 | + | OsCMeo_10g0014440.01,OsCMeo_10g0014440.04 | OsCMeo_10g0014440.02,OsCMeo_10g0014440.03,OsCMeo_10g0014440.04,OsCMeo_10g0014440.01 | All |
| SE | Chr10 | 18566332 | 18566578 | + | OsCMeo_10g0014440.01 | OsCMeo_10g0014440.02,OsCMeo_10g0014440.03,OsCMeo_10g0014440.01 | All |
| SE | Chr10 | 18568648 | 18568865 | + | OsCMeo_10g0014440.02,OsCMeo_10g0014440.05 | OsCMeo_10g0014440.04,OsCMeo_10g0014440.03,OsCMeo_10g0014440.01,OsCMeo_10g0014440.02,OsCMeo_10g0014440.05 | All |
| SE | Chr10 | 18566332 | 18566578 | + | OsCMeo_10g0014440.04 | OsCMeo_10g0014440.02,OsCMeo_10g0014440.03,OsCMeo_10g0014440.04 | All |
| A5 | Chr10 | 18566480 | 18566578 | + | OsCMeo_10g0014440.01 | OsCMeo_10g0014440.04,OsCMeo_10g0014440.01 | All |
| A5 | Chr10 | 18566724 | 18566828 | + | OsCMeo_10g0014440.01,OsCMeo_10g0014440.02,OsCMeo_10g0014440.03,OsCMeo_10g0014440.04 | OsCMeo_10g0014440.04,OsCMeo_10g0014440.03,OsCMeo_10g0014440.01,OsCMeo_10g0014440.02,OsCMeo_10g0014440.05 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.122036 | 13.851602 | 13.606619 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0479800 | RBH | 2.764037 | 0.587996 | 2.952339 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g33930 | RBH | 0.954974 | 0.371564 | 0.713332 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0479800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0014750 | RBH | 0.536763 | 22.146107 | 9.114083 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0015000 | RBH | 0.150604 | 5.641994 | 1.375648 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0014790 | RBH | 0.081132 | 0.473452 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0014670 | RBH | 0.727274 | 21.160608 | 15.651874 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0296900 | RBH | 4.4088175 | 13.190058 | 11.9247715 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0014640 | RBH | 0.084882 | 1.707781 | 0.845192 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0319400 | RBH | 8.7414645 | 16.5363325 | 13.812209 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0014350 | RBH | 0.097469 | 0.434762 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0014260 | RBH | 0.165168 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0014670 | RBH | 0.000000 | 18.262392 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0014380 | RBH | 0.230503 | 0.0 | 0.484009 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0014920 | RBH | 0.000000 | 8.602811 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G014600 | RBH | 0.000000 | 2.776776 | 1.025612 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0014580 | RBH | 0.139043 | 16.456944 | 4.358626 |
