Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_08g0020350 | OGI:08070200 | 15/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr08:24437420-24441004 | ||||||||
| Gene Symbol | RLCK256, OsRLCK256 | ||||||||||
| DNA seq | atgccgccgcgctggcgcgccacggcgacgaggcttctcgtgctcctcgcgtgcgcgtgcgcggtgttcgtcccgcggtgccattgcgtcggcgaccagggcgaggcgctgctgcgatggaaggcgtcgctgctgaacgggacgggcggcggcggcggcgggctggactcgtggagggcgtcggacgcgagcccgtgccggtggctcggcgtgtcgtgcgacgcgcgcggcgacgtcgtggcggtgaccatcaagacggtcgaccttggcggggcgctgccggcggcgagcgtgctgccgctggcgaggtcgctgaagacgctggtgctctccggcaccaacctcaccggcgcgatcccgaaggagctcggcgacctcgccgagctgagcacgcttgacctcaccaagaaccagctcaccggcgctatcccggccgagctgtgccggctgaggaagctccagtcgctggcgctcaacagcaactcgctgcgcggcgccatccccgacgccattggcaacctcaccggcttgacgtcgctcacgctctacgacaacgagctgagcggcgccatcccggcgagcatcggcaacctcaagaagctccaggtgctccgcgccggcgggaaccaggcgctcaagggcccgctgccgccggagatcggcggttgcaccgacctcacaatgctcggactcgccgagaccggcatctccggcagcctcccggcgacgatcggcaacctcaagaagatccagaccatcgccatctacaccgccatgctcaccggctccatcccggagagcatcggcaactgcaccgagctcaccagcctctacctctaccagaacaccctctccggcgggatcccgccgcagctcggccagctcaagaagcttcagacggtgctcctatggcagaaccagctcgtcggcacgatcccgccggagatcggcaactgcaaggagctcgtgctcatcgacctgtccctgaacgagctcaccggcccgatcccgagaagcttcggcggcttgccgaacctgcagcagctgcagctcagcaccaacaagctcaccggcgtcatcccgccggagctctccaactgcacgtcgctgaccgacatcgaggtggacaacaaccagctcaccggcgcgatcggcgtcgacttcccgaggctgcgcaacctgacgctgttctacgcgtggcagaaccggctcaccggcggaattccggcgagcctcgcgcagtgcgagggcttgcagtcgctggacctctcgtacaacaacctcaccggcgccatcccgagggagctcttcgcgctgcagaatctcaccaagcttctcctgctcagcaacgacctcgccggtttcatcccgccggagatcggcaactgcacgaacctctaccggctccggctgaacggcaaccggctttccggcacgatcccggcggagatcggcaacctgaagaacctcaacttcctcgacctcggcggcaaccgcctcaccggcccgttgccggcggcgatgtcggggtgcgacaacctcgagttcatggacctgcactccaatgctctcaccggcacgttgcccggcgacctcccgcgaagtctccagttcgtcgacgtctccgacaaccggctcaccggagttcttggcgccggcattgggtcattgccggagctgacgaagctgaacctcgggaagaaccggatctccggtggcataccgccggagctcggctcttgcgagaagctccagctgctcgacctcggcgacaacgcgctctccggtggcatcccgccggagctcgggaagctccctttcttggagatttcgcttaacctcagctgcaaccgcctctccggcgagatcccgtcgcagttcgccgggctcgacaagctcggctgcctcgacgtctcgtacaaccagctctccggtagcctcgagccattggcaaggctggagaacctcgtcacgctcaacatctcctacaacgccttctccggcgagcttcccgacacggccttcttccagaagctacccatcaacgacatcgccggcaaccacctgctcgtcgtcggctccggcggcgacgaggccacccggcgggcggccatctcgtcgctgaagctagccatgacggtcctcgccgtggtcagcgcgcttctcctcctgtcggcgacgtacgtgctcgcccgctcgcgccgcagcgacagcagcggcgccatccacggcgccggcgaggcgtgggaggtgacgctgtaccagaagctggacttctccgtggacgaggtggtccggtcgctgacgtcggcgaacgtgatcggcacggggagctccggggtggtgtaccgcgtggggctccccagcggcgactccgtcgccgtgaagaagatgtggtcctccgacgaggccggcgcgttccggaacgagatcgcggcgctgggctcgatccgccaccggaacatcgtccggctgctcgggtggggcgcgaaccggagcaccaagctgctgttctacacctacctccccaacggcagcctcagcgggttcctccaccgcggcggcgtcaagggcgccgccgagtgggcgccgcgctacgacatcgcgctcggcgtcgcccacgccgtcgcctacctccaccacgactgcctcccggccatcctgcacggcgacatcaaggccatgaacgtcctgctcggcccgcgcaacgagccctacctcgccgacttcggcctcgcccgcgtcctctccggcgccgtcgactccggctccgccaaggttgactcgtccaagcctcgcatcgccggctcctacggctatatcgcaccaggtaaaaaaaaaaaaagcttcacacgctttgaatccagatttttttgaacccggtattcttagctgattacgtcgataatatttagataaatttcattttcatcttagataaatttaaaatttaaaattattacaatttaacatataaactacaaagctatggtgaatctggtatctgtagttatgcttatgctaaacataaccttactttctgaaatttttctatcattttagaaaataattctttttctaaaacttttttatatgacagagtacgcgtcaatgcaaaggattagtgagaagagcgacgtgtacagcttcggcgtggttgtgctggagatcctgacggggagacacccgctggacccgacgctgccaggtgggacccacctggtgcagtgggtgcgggaccacctgcaggcgaagcgggccgtggcggagctcctcgacccgcggctgcgcgggaagccggaggcgcaggtgcaggagatgctgcaggtgttctccgtcgccgtgctctgcatcgcgcaccgcgccgacgaccggccggcgatgaaggacgtggtggcgctgctgaaggagatccggcggccggtcgagggcggcgccaccggcggcggcgaggggaaggagcagaatgccgccgccgccgccgccgcgcctccggcggccgagcgacggtcgccggcgaggagcacgctgccgaagggcggctcttctagctgctcgtttgccatgtcagattactcgagttga
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| CDS seq | atgccgccgcgctggcgcgccacggcgacgaggcttctcgtgctcctcgcgtgcgcgtgcgcggtgttcgtcccgcggtgccattgcgtcggcgaccagggcgaggcgctgctgcgatggaaggcgtcgctgctgaacgggacgggcggcggcggcggcgggctggactcgtggagggcgtcggacgcgagcccgtgccggtggctcggcgtgtcgtgcgacgcgcgcggcgacgtcgtggcggtgaccatcaagacggtcgaccttggcggggcgctgccggcggcgagcgtgctgccgctggcgaggtcgctgaagacgctggtgctctccggcaccaacctcaccggcgcgatcccgaaggagctcggcgacctcgccgagctgagcacgcttgacctcaccaagaaccagctcaccggcgctatcccggccgagctgtgccggctgaggaagctccagtcgctggcgctcaacagcaactcgctgcgcggcgccatccccgacgccattggcaacctcaccggcttgacgtcgctcacgctctacgacaacgagctgagcggcgccatcccggcgagcatcggcaacctcaagaagctccaggtgctccgcgccggcgggaaccaggcgctcaagggcccgctgccgccggagatcggcggttgcaccgacctcacaatgctcggactcgccgagaccggcatctccggcagcctcccggcgacgatcggcaacctcaagaagatccagaccatcgccatctacaccgccatgctcaccggctccatcccggagagcatcggcaactgcaccgagctcaccagcctctacctctaccagaacaccctctccggcgggatcccgccgcagctcggccagctcaagaagcttcagacggtgctcctatggcagaaccagctcgtcggcacgatcccgccggagatcggcaactgcaaggagctcgtgctcatcgacctgtccctgaacgagctcaccggcccgatcccgagaagcttcggcggcttgccgaacctgcagcagctgcagctcagcaccaacaagctcaccggcgtcatcccgccggagctctccaactgcacgtcgctgaccgacatcgaggtggacaacaaccagctcaccggcgcgatcggcgtcgacttcccgaggctgcgcaacctgacgctgttctacgcgtggcagaaccggctcaccggcggaattccggcgagcctcgcgcagtgcgagggcttgcagtcgctggacctctcgtacaacaacctcaccggcgccatcccgagggagctcttcgcgctgcagaatctcaccaagcttctcctgctcagcaacgacctcgccggtttcatcccgccggagatcggcaactgcacgaacctctaccggctccggctgaacggcaaccggctttccggcacgatcccggcggagatcggcaacctgaagaacctcaacttcctcgacctcggcggcaaccgcctcaccggcccgttgccggcggcgatgtcggggtgcgacaacctcgagttcatggacctgcactccaatgctctcaccggcacgttgcccggcgacctcccgcgaagtctccagttcgtcgacgtctccgacaaccggctcaccggagttcttggcgccggcattgggtcattgccggagctgacgaagctgaacctcgggaagaaccggatctccggtggcataccgccggagctcggctcttgcgagaagctccagctgctcgacctcggcgacaacgcgctctccggtggcatcccgccggagctcgggaagctccctttcttggagatttcgcttaacctcagctgcaaccgcctctccggcgagatcccgtcgcagttcgccgggctcgacaagctcggctgcctcgacgtctcgtacaaccagctctccggtagcctcgagccattggcaaggctggagaacctcgtcacgctcaacatctcctacaacgccttctccggcgagcttcccgacacggccttcttccagaagctacccatcaacgacatcgccggcaaccacctgctcgtcgtcggctccggcggcgacgaggccacccggcgggcggccatctcgtcgctgaagctagccatgacggtcctcgccgtggtcagcgcgcttctcctcctgtcggcgacgtacgtgctcgcccgctcgcgccgcagcgacagcagcggcgccatccacggcgccggcgaggcgtgggaggtgacgctgtaccagaagctggacttctccgtggacgaggtggtccggtcgctgacgtcggcgaacgtgatcggcacggggagctccggggtggtgtaccgcgtggggctccccagcggcgactccgtcgccgtgaagaagatgtggtcctccgacgaggccggcgcgttccggaacgagatcgcggcgctgggctcgatccgccaccggaacatcgtccggctgctcgggtggggcgcgaaccggagcaccaagctgctgttctacacctacctccccaacggcagcctcagcgggttcctccaccgcggcggcgtcaagggcgccgccgagtgggcgccgcgctacgacatcgcgctcggcgtcgcccacgccgtcgcctacctccaccacgactgcctcccggccatcctgcacggcgacatcaaggccatgaacgtcctgctcggcccgcgcaacgagccctacctcgccgacttcggcctcgcccgcgtcctctccggcgccgtcgactccggctccgccaaggcgaagcgggccgtggcggagctcctcgacccgcggctgcgcgggaagccggaggcgcaggtgcaggagatgctgcaggtgttctccgtcgccgtgctctgcatcgcgcaccgcgccgacgaccggccggcgatgaaggacgtggtggcgctgctgaaggagatccggcggccggtcgagggcggcgccaccggcggcggcgaggggaaggagcagaatgccgccgccgccgccgccgcgcctccggcggccgagcgacggtcgccggcgaggagcacgctgccgaagggcggctcttctagctgctcgtttgccatgtcagattactcgagttga
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| Protein seq | MPPRWRATATRLLVLLACACAVFVPRCHCVGDQGEALLRWKASLLNGTGGGGGGLDSWRASDASPCRWLGVSCDARGDVVAVTIKTVDLGGALPAASVLPLARSLKTLVLSGTNLTGAIPKELGDLAELSTLDLTKNQLTGAIPAELCRLRKLQSLALNSNSLRGAIPDAIGNLTGLTSLTLYDNELSGAIPASIGNLKKLQVLRAGGNQALKGPLPPEIGGCTDLTMLGLAETGISGSLPATIGNLKKIQTIAIYTAMLTGSIPESIGNCTELTSLYLYQNTLSGGIPPQLGQLKKLQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRSFGGLPNLQQLQLSTNKLTGVIPPELSNCTSLTDIEVDNNQLTGAIGVDFPRLRNLTLFYAWQNRLTGGIPASLAQCEGLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTNLYRLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDLHSNALTGTLPGDLPRSLQFVDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGGIPPELGSCEKLQLLDLGDNALSGGIPPELGKLPFLEISLNLSCNRLSGEIPSQFAGLDKLGCLDVSYNQLSGSLEPLARLENLVTLNISYNAFSGELPDTAFFQKLPINDIAGNHLLVVGSGGDEATRRAAISSLKLAMTVLAVVSALLLLSATYVLARSRRSDSSGAIHGAGEAWEVTLYQKLDFSVDEVVRSLTSANVIGTGSSGVVYRVGLPSGDSVAVKKMWSSDEAGAFRNEIAALGSIRHRNIVRLLGWGANRSTKLLFYTYLPNGSLSGFLHRGGVKGAAEWAPRYDIALGVAHAVAYLHHDCLPAILHGDIKAMNVLLGPRNEPYLADFGLARVLSGAVDSGSAKAKRAVAELLDPRLRGKPEAQVQEMLQVFSVAVLCIAHRADDRPAMKDVVALLKEIRRPVEGGATGGGEGKEQNAAAAAAAPPAAERRSPARSTLPKGGSSSCSFAMSDYSS |
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| Function | LRR receptor-like serine/threonine-protein kinase [UniProtKB/Swiss-Prot:C0LGR3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_08g0020350 | OsCMeo_08g0020350.01 | Chr08 | 24437420 | 24441004 | + | NAM | ||
| CDS seq | atgccgccgcgctggcgcgccacggcgacgaggcttctcgtgctcctcgcgtgcgcgtgcgcggtgttcgtcccgcggtgccattgcgtcggcgaccagggcgaggcgctgctgcgatggaaggcgtcgctgctgaacgggacgggcggcggcggcggcgggctggactcgtggagggcgtcggacgcgagcccgtgccggtggctcggcgtgtcgtgcgacgcgcgcggcgacgtcgtggcggtgaccatcaagacggtcgaccttggcggggcgctgccggcggcgagcgtgctgccgctggcgaggtcgctgaagacgctggtgctctccggcaccaacctcaccggcgcgatcccgaaggagctcggcgacctcgccgagctgagcacgcttgacctcaccaagaaccagctcaccggcgctatcccggccgagctgtgccggctgaggaagctccagtcgctggcgctcaacagcaactcgctgcgcggcgccatccccgacgccattggcaacctcaccggcttgacgtcgctcacgctctacgacaacgagctgagcggcgccatcccggcgagcatcggcaacctcaagaagctccaggtgctccgcgccggcgggaaccaggcgctcaagggcccgctgccgccggagatcggcggttgcaccgacctcacaatgctcggactcgccgagaccggcatctccggcagcctcccggcgacgatcggcaacctcaagaagatccagaccatcgccatctacaccgccatgctcaccggctccatcccggagagcatcggcaactgcaccgagctcaccagcctctacctctaccagaacaccctctccggcgggatcccgccgcagctcggccagctcaagaagcttcagacggtgctcctatggcagaaccagctcgtcggcacgatcccgccggagatcggcaactgcaaggagctcgtgctcatcgacctgtccctgaacgagctcaccggcccgatcccgagaagcttcggcggcttgccgaacctgcagcagctgcagctcagcaccaacaagctcaccggcgtcatcccgccggagctctccaactgcacgtcgctgaccgacatcgaggtggacaacaaccagctcaccggcgcgatcggcgtcgacttcccgaggctgcgcaacctgacgctgttctacgcgtggcagaaccggctcaccggcggaattccggcgagcctcgcgcagtgcgagggcttgcagtcgctggacctctcgtacaacaacctcaccggcgccatcccgagggagctcttcgcgctgcagaatctcaccaagcttctcctgctcagcaacgacctcgccggtttcatcccgccggagatcggcaactgcacgaacctctaccggctccggctgaacggcaaccggctttccggcacgatcccggcggagatcggcaacctgaagaacctcaacttcctcgacctcggcggcaaccgcctcaccggcccgttgccggcggcgatgtcggggtgcgacaacctcgagttcatggacctgcactccaatgctctcaccggcacgttgcccggcgacctcccgcgaagtctccagttcgtcgacgtctccgacaaccggctcaccggagttcttggcgccggcattgggtcattgccggagctgacgaagctgaacctcgggaagaaccggatctccggtggcataccgccggagctcggctcttgcgagaagctccagctgctcgacctcggcgacaacgcgctctccggtggcatcccgccggagctcgggaagctccctttcttggagatttcgcttaacctcagctgcaaccgcctctccggcgagatcccgtcgcagttcgccgggctcgacaagctcggctgcctcgacgtctcgtacaaccagctctccggtagcctcgagccattggcaaggctggagaacctcgtcacgctcaacatctcctacaacgccttctccggcgagcttcccgacacggccttcttccagaagctacccatcaacgacatcgccggcaaccacctgctcgtcgtcggctccggcggcgacgaggccacccggcgggcggccatctcgtcgctgaagctagccatgacggtcctcgccgtggtcagcgcgcttctcctcctgtcggcgacgtacgtgctcgcccgctcgcgccgcagcgacagcagcggcgccatccacggcgccggcgaggcgtgggaggtgacgctgtaccagaagctggacttctccgtggacgaggtggtccggtcgctgacgtcggcgaacgtgatcggcacggggagctccggggtggtgtaccgcgtggggctccccagcggcgactccgtcgccgtgaagaagatgtggtcctccgacgaggccggcgcgttccggaacgagatcgcggcgctgggctcgatccgccaccggaacatcgtccggctgctcgggtggggcgcgaaccggagcaccaagctgctgttctacacctacctccccaacggcagcctcagcgggttcctccaccgcggcggcgtcaagggcgccgccgagtgggcgccgcgctacgacatcgcgctcggcgtcgcccacgccgtcgcctacctccaccacgactgcctcccggccatcctgcacggcgacatcaaggccatgaacgtcctgctcggcccgcgcaacgagccctacctcgccgacttcggcctcgcccgcgtcctctccggcgccgtcgactccggctccgccaaggcgaagcgggccgtggcggagctcctcgacccgcggctgcgcgggaagccggaggcgcaggtgcaggagatgctgcaggtgttctccgtcgccgtgctctgcatcgcgcaccgcgccgacgaccggccggcgatgaaggacgtggtggcgctgctgaaggagatccggcggccggtcgagggcggcgccaccggcggcggcgaggggaaggagcagaatgccgccgccgccgccgccgcgcctccggcggccgagcgacggtcgccggcgaggagcacgctgccgaagggcggctcttctagctgctcgtttgccatgtcagattactcgagttga
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| Protein seq | MPPRWRATATRLLVLLACACAVFVPRCHCVGDQGEALLRWKASLLNGTGGGGGGLDSWRASDASPCRWLGVSCDARGDVVAVTIKTVDLGGALPAASVLPLARSLKTLVLSGTNLTGAIPKELGDLAELSTLDLTKNQLTGAIPAELCRLRKLQSLALNSNSLRGAIPDAIGNLTGLTSLTLYDNELSGAIPASIGNLKKLQVLRAGGNQALKGPLPPEIGGCTDLTMLGLAETGISGSLPATIGNLKKIQTIAIYTAMLTGSIPESIGNCTELTSLYLYQNTLSGGIPPQLGQLKKLQTVLLWQNQLVGTIPPEIGNCKELVLIDLSLNELTGPIPRSFGGLPNLQQLQLSTNKLTGVIPPELSNCTSLTDIEVDNNQLTGAIGVDFPRLRNLTLFYAWQNRLTGGIPASLAQCEGLQSLDLSYNNLTGAIPRELFALQNLTKLLLLSNDLAGFIPPEIGNCTNLYRLRLNGNRLSGTIPAEIGNLKNLNFLDLGGNRLTGPLPAAMSGCDNLEFMDLHSNALTGTLPGDLPRSLQFVDVSDNRLTGVLGAGIGSLPELTKLNLGKNRISGGIPPELGSCEKLQLLDLGDNALSGGIPPELGKLPFLEISLNLSCNRLSGEIPSQFAGLDKLGCLDVSYNQLSGSLEPLARLENLVTLNISYNAFSGELPDTAFFQKLPINDIAGNHLLVVGSGGDEATRRAAISSLKLAMTVLAVVSALLLLSATYVLARSRRSDSSGAIHGAGEAWEVTLYQKLDFSVDEVVRSLTSANVIGTGSSGVVYRVGLPSGDSVAVKKMWSSDEAGAFRNEIAALGSIRHRNIVRLLGWGANRSTKLLFYTYLPNGSLSGFLHRGGVKGAAEWAPRYDIALGVAHAVAYLHHDCLPAILHGDIKAMNVLLGPRNEPYLADFGLARVLSGAVDSGSAKAKRAVAELLDPRLRGKPEAQVQEMLQVFSVAVLCIAHRADDRPAMKDVVALLKEIRRPVEGGATGGGEGKEQNAAAAAAAPPAAERRSPARSTLPKGGSSSCSFAMSDYSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 10.297862 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0493800 | RBH | 0.0 | 0.0 | 0.204636 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g38560 | RBH | 0.0 | 0.0 | 0.042374 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0493800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0020560 | RBH | 0.0 | 0.842686 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0020480 | RBH | 0.0 | 7.981996 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0014340 | RBH | 0.000000 | 3.569605 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0020550 | RBH | 0.0 | 0.767535 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0020450 | RBH | 0.0 | 73.931900 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0398700 | SBH | 4.33954 | 2.265702 | 13.7193865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0020320 | RBH | 0.0 | 1.753798 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0409200 | RBH | 0.0482265 | 3.7212745 | 0.1295065 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0019660 | RBH | 0.0 | 0.314883 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0019940 | RBH | 0.0 | 21.897503 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0019790 | RBH | 0.0 | 33.957016 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0020630 | RBH | 0.0 | 1.654127 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0019980 | RBH | 0.0 | 27.788771 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G020140 | RBH | 0.0 | 19.244265 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0020290 | RBH | 0.0 | 39.118557 | 0.0 |
