Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_08g0000470 | OGI:08000920 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr08:314321-314995 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAAGAAGAAGAAGTAGTGTTGTTGGTGACGGGGTAGCCGATGCCATGGCGAGTGGTGGGGAAGACGACGAAGAGGAGGCTGCACATGACGCCGACGCCCAGCGGCACGATGCCCAGCACCTCCTCCGTCCCCTTCGCCGGCGACGGCCAGAAGCACCCCACCACGTTCTTGTCCCTCGCCGCCACCACCCCGAACACGCCCACCGACAGCAACGCGTGTACGCCGTCGATGGCCCTCAGCCGGTACCTCGACGTGTCCGGCTGCGGTGGCGCGCCGGCGCCGGCGGGAGGGTAGTCGAGCAGCCAGAGCCCCCGTGGCGTGGCGAGGCCGTAGTAGACGCGGCCGTCGGGGCCCCTGACGGAGTCGGTGAAGGAGGCGAGGACGCAGGAGAGCGCGAGCAGGGCGAGGAGGGCGGCGGTGAGGAGCGAGGTGGTGGCGTCGCAGGCGCCGTTGTTGGTGAAGGTGGGCGCCAGCAGCTGGAACGCCATCACCGTCCCCGTCGGGAGCAGGTTCGCCAGGCTCGCCGTCGACGCCAGCGCCTGCGACAACAGCGACGGCCGCCTTGCTGCCGGCGGACGACCACCACCGCCGTCGCCGGCAGCAGCAGCGCTCTCTCCTTCTCCAGCTTGCTTACCTACCGTTGGCCTCTGCCTGACGACTGCGGGAGACGCCAT
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| CDS seq | ATGGCGTCTCCCGCAGTCGTCAGGCAGAGGCCAACGGTAGGTAAGCAAGCTGGAGAAGGAGAGAGCGCTGCTGCTGCCGGCGACGGCGGTGGTGGTCGTCCGCCGGCAGCAAGGCGGCCGTCGCTGTTGTCGCAGGCGCTGGCGTCGACGGCGAGCCTGGCGAACCTGCTCCCGACGGGGACGGTGATGGCGTTCCAGCTGCTGGCGCCCACCTTCACCAACAACGGCGCCTGCGACGCCACCACCTCGCTCCTCACCGCCGCCCTCCTCGCCCTGCTCGCGCTCTCCTGCGTCCTCGCCTCCTTCACCGACTCCGTCAGGGGCCCCGACGGCCGCGTCTACTACGGCCTCGCCACGCCACGGGGGCTCTGGCTGCTCGACTACCCTCCCGCCGGCGCCGGCGCGCCACCGCAGCCGGACACGTCGAGGTACCGGCTGAGGGCCATCGACGGCGTACACGCGTTGCTGTCGGTGGGCGTGTTCGGGGTGGTGGCGGCGAGGGACAAGAACGTGGTGGGGTGCTTCTGGCCGTCGCCGGCGAAGGGGACGGAGGAGGTGCTGGGCATCGTGCCGCTGGGCGTCGGCGTCATGTGCAGCCTCCTCTTCGTCGTCTTCCCCACCACTCGCCATGGCATCGGCTACCCCGTCACCAACAACACTACTTCTTCTTCTTAG
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| Protein seq | MASPAVVRQRPTVGKQAGEGESAAAAGDGGGGRPPAARRPSLLSQALASTASLANLLPTGTVMAFQLLAPTFTNNGACDATTSLLTAALLALLALSCVLASFTDSVRGPDGRVYYGLATPRGLWLLDYPPAGAGAPPQPDTSRYRLRAIDGVHALLSVGVFGVVAARDKNVVGCFWPSPAKGTEEVLGIVPLGVGVMCSLLFVVFPTTRHGIGYPVTNNTTSSS |
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| Function | Protein DMP3 [UniProtKB/Swiss-Prot:Q9STW3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_08g0000470 | OsCMeo_08g0000470.01 | Chr08 | 314321 | 314995 | - | NAM | ||
| CDS seq | ATGGCGTCTCCCGCAGTCGTCAGGCAGAGGCCAACGGTAGGTAAGCAAGCTGGAGAAGGAGAGAGCGCTGCTGCTGCCGGCGACGGCGGTGGTGGTCGTCCGCCGGCAGCAAGGCGGCCGTCGCTGTTGTCGCAGGCGCTGGCGTCGACGGCGAGCCTGGCGAACCTGCTCCCGACGGGGACGGTGATGGCGTTCCAGCTGCTGGCGCCCACCTTCACCAACAACGGCGCCTGCGACGCCACCACCTCGCTCCTCACCGCCGCCCTCCTCGCCCTGCTCGCGCTCTCCTGCGTCCTCGCCTCCTTCACCGACTCCGTCAGGGGCCCCGACGGCCGCGTCTACTACGGCCTCGCCACGCCACGGGGGCTCTGGCTGCTCGACTACCCTCCCGCCGGCGCCGGCGCGCCACCGCAGCCGGACACGTCGAGGTACCGGCTGAGGGCCATCGACGGCGTACACGCGTTGCTGTCGGTGGGCGTGTTCGGGGTGGTGGCGGCGAGGGACAAGAACGTGGTGGGGTGCTTCTGGCCGTCGCCGGCGAAGGGGACGGAGGAGGTGCTGGGCATCGTGCCGCTGGGCGTCGGCGTCATGTGCAGCCTCCTCTTCGTCGTCTTCCCCACCACTCGCCATGGCATCGGCTACCCCGTCACCAACAACACTACTTCTTCTTCTTAG
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| Protein seq | MASPAVVRQRPTVGKQAGEGESAAAAGDGGGGRPPAARRPSLLSQALASTASLANLLPTGTVMAFQLLAPTFTNNGACDATTSLLTAALLALLALSCVLASFTDSVRGPDGRVYYGLATPRGLWLLDYPPAGAGAPPQPDTSRYRLRAIDGVHALLSVGVFGVVAARDKNVVGCFWPSPAKGTEEVLGIVPLGVGVMCSLLFVVFPTTRHGIGYPVTNNTTSSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 7.426072 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0106501 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g01530 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0106501 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0000450 | RBH | 0.0 | 10.079454 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0000460 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0015910 | RBH | 0.0 | 0.875005 | 0.817410 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0000450 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0000430 | RBH | 0.940554 | 3.102515 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0005600 | RBH | 0.5721685 | 0.4764115 | 0.016564 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0000400 | RBH | 0.0 | 0.512165 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0005700 | RBH | 0.982267 | 0.8548155 | 0.027794 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0000510 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0000440 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0000450 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0000450 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0000450 | RBH | 0.0 | 1.245885 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G000460 | RBH | 0.0 | 0.799127 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0000450 | RBH | 0.0 | 0.0 | 0.0 |
