Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_07g0020040 | OGI:07064100 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr07:22485445-22487747 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgggtgccaggaggagctcaatgatccccgcactcttactcctcgcttccttgtccatcttcaagctaccttgctgctccagatcactctctttcagctacgatttccccaaccccgatacttttgatgattctgacatcaaaagacaaggatccgcgagtcttaatggcttcatcgacctcacgctgagcgctaataatggtatcatattcaacaagtcgggccgagcgtcctacagccatccggtgccgctctgggacgaggccaccggcgaggtgacgagttttacgacgcgcttctcgttcgtcatcaagtttaactactcaggcaaggccaagtacgcacccagcgacgggcttgccttctttctgtcatcttacccgtcagagatgcctccattcgacggcggtggattgctcggcctcttcaccaacagcacttgcatgaattcgtccgccgccgccccgatcgtcgcggtggagttcgacacgtaccaaaatgagtgggaccagagcagcgaccacatcggcatcgacgtcaactccatcaactcgaccgcggtgaagccgctgcctagcctcagcctctccagcgtcaccgagccgatggttgcgtcggtgagctacaacaacagcacaaggatgctggccgtcatgctgcagatggccccccaagatggcggcaagaggtacgagctcaacagcacggttgacctcaagagcttgctccccgcgcaggtggccatcggattctcggcggcgagcgggtggtccgaggagcggcaccaagtactcacctggtctttcaattcgacattggtggcgtctgaagaacggagagaaaacgcaacgcgaggtaggccggccgctgcggtgcttgcaggtgtcgttgtagcatccgtcgtcgtcgtcggggcctcgatctgtttgtttgtaatgatcaggcggcgtaggatatctcgccggcggacgagagaagagtacgagatgggcggctccgacgacttcgacatgaacgatgagttcgagcaaggcaccggtccgaggcgatttctgtacagccaactggccaccgcgacgaacgacttctccgaggacgggaagctcggggagggtggcttcgggtcggtgtacaggggcgtcttgagcgaaccggccggcgtccacgtcgccgtcaagaggatctccaagacctccaagcaggggaggaaggagtacgcctccgaggtgagcatcatcagccgcctccggcaccggaacctggtgcagctcgtcggctggtgccacggccgcggcgacttcctcctcgtctacgagctggtgcccaacggcagcctcgacgcgcacctctacggcggcggcccgacgctgccgtggccgaccaggtacgagatcgcgctcgggctcggctcggcgctgctctacctgcactccggctacgagaagtgcgtggtgcacagggacatcaagcccagcaacatcatgctcgactccgccttcgccgccaagctcggcgacttcgggctggcgaagctcgtcgaccacggcgacgcctcgcagacgacggcggtcctggcggggacgatggggtacatggacccggagtacgcggcctccggcaaggcgagcaccgcgtccgacgtctacagcttcggcatcgtgctgctggagatgtgctgcgggaggaggcccgtgctgctccaagaacaatccatcaggtcccgcctcctcgagtgggtctgggacctccacggccgcggctccatcctcgaggcggccgacgagcggctgcgcggcggcgagctcgagctcgacgcgaagcaggtggagtgcgtgatggtcgtggggctctggtgcgcgcacccggaccgcggcgtgcggccgtccatcaagcaggcgctcgccgcgctccagttcgaggctccgctgccggctcttcctccgacgatgcccgtgccgacgtactcctcctcgccgagccttgcattgtactgcgacgcggcggcagctagctcgtcgtcatccagtgcagggttttcttcttccacgagtggcgagcgttcgtcgacgagctcctctgcagcaaccgccgagtcgtcgtggctacttaagcacaacaacaggggcagtgaaaaaacagtattaggcaacaattgattagatcatatctttagtttgatgccaccttgatgttgcttggcttagctcttcgttgtttatgtgtattgttcttccttgggccgccgtgtcatttgtgatatgtacctcaattcatatctccttttctatatatgcgttttcaa
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| CDS seq | atgggtgccaggaggagctcaatgatccccgcactcttactcctcgcttccttgtccatcttcaagctaccttgctgctccagatcactctctttcagctacgatttccccaaccccgatacttttgatgattctgacatcaaaagacaaggatccgcgagtcttaatggcttcatcgacctcacgctgagcgctaataatggtatcatattcaacaagtcgggccgagcgtcctacagccatccggtgccgctctgggacgaggccaccggcgaggtgacgagttttacgacgcgcttctcgttcgtcatcaagtttaactactcaggcaaggccaagtacgcacccagcgacgggcttgccttctttctgtcatcttacccgtcagagatgcctccattcgacggcggtggattgctcggcctcttcaccaacagcacttgcatgaattcgtccgccgccgccccgatcgtcgcggtggagttcgacacgtaccaaaatgagtgggaccagagcagcgaccacatcggcatcgacgtcaactccatcaactcgaccgcggtgaagccgctgcctagcctcagcctctccagcgtcaccgagccgatggttgcgtcggtgagctacaacaacagcacaaggatgctggccgtcatgctgcagatggccccccaagatggcggcaagaggtacgagctcaacagcacggttgacctcaagagcttgctccccgcgcaggtggccatcggattctcggcggcgagcgggtggtccgaggagcggcaccaagtactcacctggtctttcaattcgacattggtggcgtctgaagaacggagagaaaacgcaacgcgaggtaggccggccgctgcggtgcttgcaggtgtcgttgtagcatccgtcgtcgtcgtcggggcctcgatctgtttgtttgtaatgatcaggcggcgtaggatatctcgccggcggacgagagaagagtacgagatgggcggctccgacgacttcgacatgaacgatgagttcgagcaaggcaccggtccgaggcgatttctgtacagccaactggccaccgcgacgaacgacttctccgaggacgggaagctcggggagggtggcttcgggtcggtgtacaggggcgtcttgagcgaaccggccggcgtccacgtcgccgtcaagaggatctccaagacctccaagcaggggaggaaggagtacgcctccgaggtgagcatcatcagccgcctccggcaccggaacctggcgagcaccgcgtccgacgtctacagcttcggcatcgtgctgctggagatgtgctgcgggaggaggcccgtgctgctccaagaacaatccatcaggtcccgcctcctcgagtgggtctgggacctccacggccgcggctccatcctcgaggcggccgacgagcggctgcgcggcggcgagctcgagctcgacgcgaagcaggtggagtgcgtgatggtcgtggggctctggtgcgcgcacccggaccgcggcgtgcggccgtccatcaagcaggcgctcgccgcgctccagttcgaggctccgctgccggctcttcctccgacgatgcccgtgccgacgtactcctcctcgccgagccttgcattgtactgcgacgcggcggcagctagctcgtcgtcatccagtgcagggttttcttcttccacgagtggcgagcgttcgtcgacgagctcctctgcagcaaccgccgagtcgtcgtggctacttaagcacaacaacaggggcagtgaaaaaacagtattaggcaacaattga
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| Protein seq | MGARRSSMIPALLLLASLSIFKLPCCSRSLSFSYDFPNPDTFDDSDIKRQGSASLNGFIDLTLSANNGIIFNKSGRASYSHPVPLWDEATGEVTSFTTRFSFVIKFNYSGKAKYAPSDGLAFFLSSYPSEMPPFDGGGLLGLFTNSTCMNSSAAAPIVAVEFDTYQNEWDQSSDHIGIDVNSINSTAVKPLPSLSLSSVTEPMVASVSYNNSTRMLAVMLQMAPQDGGKRYELNSTVDLKSLLPAQVAIGFSAASGWSEERHQVLTWSFNSTLVASEERRENATRGRPAAAVLAGVVVASVVVVGASICLFVMIRRRRISRRRTREEYEMGGSDDFDMNDEFEQGTGPRRFLYSQLATATNDFSEDGKLGEGGFGSVYRGVLSEPAGVHVAVKRISKTSKQGRKEYASEVSIISRLRHRNLASTASDVYSFGIVLLEMCCGRRPVLLQEQSIRSRLLEWVWDLHGRGSILEAADERLRGGELELDAKQVECVMVVGLWCAHPDRGVRPSIKQALAALQFEAPLPALPPTMPVPTYSSSPSLALYCDAAAASSSSSSAGFSSSTSGERSSTSSSAATAESSWLLKHNNRGSEKTVLGNN |
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| Function | L-type lectin-domain containing receptor kinase IX.1 [UniProtKB/Swiss-Prot:Q9LXA5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0020040 | OsCMeo_07g0020040.01 | Chr07 | 22485445 | 22487747 | + | NAM | ||
| CDS seq | atgggtgccaggaggagctcaatgatccccgcactcttactcctcgcttccttgtccatcttcaagctaccttgctgctccagatcactctctttcagctacgatttccccaaccccgatacttttgatgattctgacatcaaaagacaaggatccgcgagtcttaatggcttcatcgacctcacgctgagcgctaataatggtatcatattcaacaagtcgggccgagcgtcctacagccatccggtgccgctctgggacgaggccaccggcgaggtgacgagttttacgacgcgcttctcgttcgtcatcaagtttaactactcaggcaaggccaagtacgcacccagcgacgggcttgccttctttctgtcatcttacccgtcagagatgcctccattcgacggcggtggattgctcggcctcttcaccaacagcacttgcatgaattcgtccgccgccgccccgatcgtcgcggtggagttcgacacgtaccaaaatgagtgggaccagagcagcgaccacatcggcatcgacgtcaactccatcaactcgaccgcggtgaagccgctgcctagcctcagcctctccagcgtcaccgagccgatggttgcgtcggtgagctacaacaacagcacaaggatgctggccgtcatgctgcagatggccccccaagatggcggcaagaggtacgagctcaacagcacggttgacctcaagagcttgctccccgcgcaggtggccatcggattctcggcggcgagcgggtggtccgaggagcggcaccaagtactcacctggtctttcaattcgacattggtggcgtctgaagaacggagagaaaacgcaacgcgaggtaggccggccgctgcggtgcttgcaggtgtcgttgtagcatccgtcgtcgtcgtcggggcctcgatctgtttgtttgtaatgatcaggcggcgtaggatatctcgccggcggacgagagaagagtacgagatgggcggctccgacgacttcgacatgaacgatgagttcgagcaaggcaccggtccgaggcgatttctgtacagccaactggccaccgcgacgaacgacttctccgaggacgggaagctcggggagggtggcttcgggtcggtgtacaggggcgtcttgagcgaaccggccggcgtccacgtcgccgtcaagaggatctccaagacctccaagcaggggaggaaggagtacgcctccgaggtgagcatcatcagccgcctccggcaccggaacctggcgagcaccgcgtccgacgtctacagcttcggcatcgtgctgctggagatgtgctgcgggaggaggcccgtgctgctccaagaacaatccatcaggtcccgcctcctcgagtgggtctgggacctccacggccgcggctccatcctcgaggcggccgacgagcggctgcgcggcggcgagctcgagctcgacgcgaagcaggtggagtgcgtgatggtcgtggggctctggtgcgcgcacccggaccgcggcgtgcggccgtccatcaagcaggcgctcgccgcgctccagttcgaggctccgctgccggctcttcctccgacgatgcccgtgccgacgtactcctcctcgccgagccttgcattgtactgcgacgcggcggcagctagctcgtcgtcatccagtgcagggttttcttcttccacgagtggcgagcgttcgtcgacgagctcctctgcagcaaccgccgagtcgtcgtggctacttaagcacaacaacaggggcagtgaaaaaacagtattaggcaacaattga
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| Protein seq | MGARRSSMIPALLLLASLSIFKLPCCSRSLSFSYDFPNPDTFDDSDIKRQGSASLNGFIDLTLSANNGIIFNKSGRASYSHPVPLWDEATGEVTSFTTRFSFVIKFNYSGKAKYAPSDGLAFFLSSYPSEMPPFDGGGLLGLFTNSTCMNSSAAAPIVAVEFDTYQNEWDQSSDHIGIDVNSINSTAVKPLPSLSLSSVTEPMVASVSYNNSTRMLAVMLQMAPQDGGKRYELNSTVDLKSLLPAQVAIGFSAASGWSEERHQVLTWSFNSTLVASEERRENATRGRPAAAVLAGVVVASVVVVGASICLFVMIRRRRISRRRTREEYEMGGSDDFDMNDEFEQGTGPRRFLYSQLATATNDFSEDGKLGEGGFGSVYRGVLSEPAGVHVAVKRISKTSKQGRKEYASEVSIISRLRHRNLASTASDVYSFGIVLLEMCCGRRPVLLQEQSIRSRLLEWVWDLHGRGSILEAADERLRGGELELDAKQVECVMVVGLWCAHPDRGVRPSIKQALAALQFEAPLPALPPTMPVPTYSSSPSLALYCDAAAASSSSSSAGFSSSTSGERSSTSSSAATAESSWLLKHNNRGSEKTVLGNN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0569800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g38250 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0569800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0020160 | RBH | 0.0 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0020110 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0019950 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0020010 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0374900 | RBH | 0 | 0.664644 | 0.0275035 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0020470 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0387500 | RBH | 0 | 0.9805755 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0019800 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0019910 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0019850 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0020030 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0019780 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G019690 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0019790 | RBH | 0.0 | 0.0 | 0.0 |
