Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_07g0012220 | OGI:07039640 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr07:13973394-13974002 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgaaggttttcaccttccgctcgccggcgctgcggccggtagaagtagacctcgacgacggccaccccgtcggcgctctcggcatgatcgttctgttctacgacctcgacgccaaggaggccgtcaagaacgagttactggccgtgaaccagataatgaagcattctccgaaattagctcaaatgatgttagactagagtcaaattatggggctatgtatcttttgatttttttttcttctttttgtctttctggggaatccgtcttctctgtaatgatgatgatcaactgtgtgaaagtaattttggcttaatttatttgttacctcgttttgcccttctgggggatttctctctaacgaggatgatcactgtgtaagtatttctgttagcttaattagttgccaactggctattgttgttcatatatactcatatacagtaaacattaaaaaaaattcttccaatgttaattcatgtaattaataatataaatatattattttgttcctatccgtattctaacgggacaaaccactgtgcattagatggctactaaatataattaaagcaccagtaattcatgctttcttcaggcttcagacttaa
More
|
||||||||||
| CDS seq | atgaaggttttcaccttccgctcgccggcgctgcggccggtagaagtagacctcgacgacggccaccccgtcggcgctctcggcatgatcgttctgttctacgacctcgacgccaaggaggccgtcaagaacgagttactggccgtgaaccagataatgaagcattctccgaaattagctcaaatgatgcttcagacttaa |
||||||||||
| Protein seq | MKVFTFRSPALRPVEVDLDDGHPVGALGMIVLFYDLDAKEAVKNELLAVNQIMKHSPKLAQMMLQT |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0012220 | OsCMeo_07g0012220.01 | Chr07 | 13973394 | 13974002 | + | NAM | ||
| CDS seq | atgaaggttttcaccttccgctcgccggcgctgcggccggtagaagtagacctcgacgacggccaccccgtcggcgctctcggcatgatcgttctgttctacgacctcgacgccaaggaggccgtcaagaacgagttactggccgtgaaccagataatgaagcattctccgaaattagctcaaatgatgcttcagacttaa
More
|
|||||||
| Protein seq | MKVFTFRSPALRPVEVDLDDGHPVGALGMIVLFYDLDAKEAVKNELLAVNQIMKHSPKLAQMMLQT |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g24170 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0012330 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0012140 | SBH | 0.0 | 0.0 | 0.326669 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0012040 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0012040 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0237900 | RBH | 0 | 0.0308915 | 0.0733615 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0012530 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0240100 | RBH | 0 | 0 | 0.458836 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0012050 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0012100 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0011990 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0012320 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0012140 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G012070 | RBH | 0.0 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0011940 | SBH | 0.0 | 0.0 | 0.0 |
