Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_07g0010040 | OGI:07029950 | 12/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr07:10558555-10561756 | ||||||||
| Gene Symbol | WRKY123, OsWRKY123, DLN183, OsDLN183 | ||||||||||
| DNA seq | atggcttctgggctcgggcaactaactgatctgcaaacagtaacagtatttaatattggggatgatttatcacattgttcaattggggacctgaagaatctctgtagactaaggggacatattcatataacagggcttcagaatattactgcaggcgatgatgccaaagaagcaaatctagtagtaatcaattcctagaagctttgacactagaatgatgttgcagcagcgaggaattggaagatgacagtgacaaagaaattgttaatcaggtccaaaatcttcagcctaacactagcctttttgagctagctatacaaaattatcctggcaatttattccctatttggattcaggattcttcccttggcatgctggtgtcaattacgaccgatgactgccaaaattgtaatgagatcccatatcttggtgatcttccatctcttaaatatctcttcatacagaaaatgtatgttgttgaaagctttggacaaagaagtaactctttgactactgatgggagatgtactgaatctttgggagatatactctttgcaattctggaatggaacaagcaaggaggatttcccacggcttcgttgtctctctgtcagtagatgcccaaaactaagtaatttgcagcgacgaatgacacagcagctcaggtgttgcagtacctcagacccaattcaaatctggaggagctcatcatgaaaggttataatggatcatcattcccatcatgggtagggtctctacctttggacaggttagcttcaatagaactcaaagactgacaaaattgcgaagaactaccacctcctggaagattcccatccctgaaacatgatgtgatacagtcactaccaagtgtcaaactagttgggcctgaatttcttggcaatgttggcgatattaattacTtttttttttgacaagaaacagcaagataggctcctactgtgttatatactccctccgtttcgaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaacttttgtgagatatgtaaaattatatgcctacataaaaatatatttaataatgaattaaatgaatggaaaaaaattaataattacttaaattttttgaataagacgaacggtcaaacatgtgataaaaagtcaacggcgtcaaacatttcaaaacggatggagtattaaataataaaatagagtttatatacatcgaagaaaaaaataaaaaaaatatttacaagtggattagaaacgagagtctagccatgattgaaatgggggtctgtcttcttccttcactctttgcataagaagagcgaaattttccttaaaggccgatttccaatgattgagagatatggcaatattgtcaaaaataagagcatttcgtgaggaccatatctgccagtatgctgtgcctattacctcaacaaagaatggccggttaaaaacatgataggctgactgaatcatttgcagaaattccaaatcctcatcccagctgacaccaaggagattcctgcatgatttggcaaatgggcaagagaaaaacatgtgcaccatatcttccaaaacccctgaagtacacattttacaggaagggccatcttggacatgcaattgtcgcctttgaagcatatctcgtgtgtttaatctatccataaaaaggagctagagaaaagctttaactttcattgtgcacttacttttccatatggaggtaattgctggatgaggggaaaggtgagcaaaaaacaagtcatagaccttctttcacttgaaaattgtcccccaggaatatgtccaaatgtctgggtgatctgtgagattgatattttccaaaaggcgtgaaagttcagtgaattgctgtaacgcttggggggatagtggcaaattgaaattttctgtcacatcattctgaacataagtttatactgtgataccttcattgatagcaaaggaaaataatgttgagaaagcattttgaggcaagtcatctgtccatgggtctttccagaaaagagccaaatctcctgtgtttatctggattgtactaacccctctgaagattgggattaaacgaaagatatctttccaccaaaatgatcctctttcctgcagggcatgcggtggcaccgagttgttactgtagtatgcattccaaatgagcttcacccaaggtagatctctcttattgaagaacttatccagatgtttcattaatagggcacagttttggaaatccaaatttatgatacccattccccctcttttctttggtttacaaactttgtcccaggctgccagggacagagacctagcatcaacttctgaagtctctaatgttaatatcaacttctgagagtgatattaattacttccagcagcagcaggagtaccgtctctaatgtttttcctgcattggagtctctgaagttcagggacatgggagcctgggaggaatggtcagaattcaaggatgaacacttcccacagctcaagtatctcagcattgttaggtgtgcaaagctgacggtgctgcccaacttcacttcaggaccaaaacagagaatcaggagttgtgagaaactgctccagcctctatgtcaggtatcttccatcaacttcttgcatcgatttttatgtaaggagatttgtcataactcataaatacatttcgttgttcatttgccctgggatcatctttttactttatcacagctgacagctgcaaatgttatttctatttatttgcttatttcttctgttttgacacaaatatgctcctagataattgctcatcaatcatcactcacgaccaagacaaactaaattatatgaaacgaggattagtgtttctgcgctcataaacagggtgaatgaagtatttctttgatttttcataatagctttggtatgtactgctttataatataaaaactattttagcccgaactgcatgttttttcttacagaataattaaactaaaaatgttttgttctctctttcctgatcagaatatacggcggaatttgatgaagtacataccaccaccaagtgaactgtcatatgcatgcatggcagaaggtaatatttcaatcatagaagcttcctgttcatacagtaggtagaacatcggaagtggagggagggcatccattattgtaaatgct
More
|
||||||||||
| CDS seq | atggcttctgggctcgggcaactaactgatctgcaaacagtaacagtatttaatattggggatgatttatcacattgttcaattggggacctgaagaatctctgtagactaaggggacatattcatataacagggcttcagaatattactgcaggcgatgatgccaaagaagcaaatctagtagattcttcccttggcatgctggtgtcaattacgaccgatgactgccaaaattgtaatgagatcccatatcttggtgatcttccatctcttaaatatctcttcatacagaaaatgtatgttgttgaaagctttggacaaagaagtaactctttgactactgatgggagatgtactgaatctttgggagatatactctttgcaattctggaatggaacaagcaaggaggatttcccacggcttcgttgtctctctcgacgaatgacacagcagctcaggtgttgcagtacctcagacccaattcaaatctggaggagctcatcatgaaaggttataatggatcatcattcccatcatgggtagggtctctacctttggacaggagtaccgtctctaatgtttttcctgcattggagtctctgaagttcagggacatgggagcctgggaggaatggtcagaattcaaggatgaacacttcccacagctcaagtatctcagcattgttaggtgtgcaaagctgacggtgctgcccaacttcacttcaggaccaaaacagagaatcaggagttgtgagaaactgctccagcctctatgtcagaatatacggcggaatttgatgaagtacataccaccaccaagtgaactgtcatatgcatgcatggcagaaggtaatatttcaatcatagaagcttcctgttcatacagtaggtag
More
|
||||||||||
| Protein seq | MASGLGQLTDLQTVTVFNIGDDLSHCSIGDLKNLCRLRGHIHITGLQNITAGDDAKEANLVDSSLGMLVSITTDDCQNCNEIPYLGDLPSLKYLFIQKMYVVESFGQRSNSLTTDGRCTESLGDILFAILEWNKQGGFPTASLSLSTNDTAAQVLQYLRPNSNLEELIMKGYNGSSFPSWVGSLPLDRSTVSNVFPALESLKFRDMGAWEEWSEFKDEHFPQLKYLSIVRCAKLTVLPNFTSGPKQRIRSCEKLLQPLCQNIRRNLMKYIPPPSELSYACMAEGNISIIEASCSYSR |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0010040 | OsCMeo_07g0010040.01 | Chr07 | 10558555 | 10561756 | + | NAM | ||
| CDS seq | atggcttctgggctcgggcaactaactgatctgcaaacagtaacagtatttaatattggggatgatttatcacattgttcaattggggacctgaagaatctctgtagactaaggggacatattcatataacagggcttcagaatattactgcaggcgatgatgccaaagaagcaaatctagtagattcttcccttggcatgctggtgtcaattacgaccgatgactgccaaaattgtaatgagatcccatatcttggtgatcttccatctcttaaatatctcttcatacagaaaatgtatgttgttgaaagctttggacaaagaagtaactctttgactactgatgggagatgtactgaatctttgggagatatactctttgcaattctggaatggaacaagcaaggaggatttcccacggcttcgttgtctctctcgacgaatgacacagcagctcaggtgttgcagtacctcagacccaattcaaatctggaggagctcatcatgaaaggttataatggatcatcattcccatcatgggtagggtctctacctttggacaggagtaccgtctctaatgtttttcctgcattggagtctctgaagttcagggacatgggagcctgggaggaatggtcagaattcaaggatgaacacttcccacagctcaagtatctcagcattgttaggtgtgcaaagctgacggtgctgcccaacttcacttcaggaccaaaacagagaatcaggagttgtgagaaactgctccagcctctatgtcagaatatacggcggaatttgatgaagtacataccaccaccaagtgaactgtcatatgcatgcatggcagaaggtaatatttcaatcatagaagcttcctgttcatacagtaggtag
More
|
|||||||
| Protein seq | MASGLGQLTDLQTVTVFNIGDDLSHCSIGDLKNLCRLRGHIHITGLQNITAGDDAKEANLVDSSLGMLVSITTDDCQNCNEIPYLGDLPSLKYLFIQKMYVVESFGQRSNSLTTDGRCTESLGDILFAILEWNKQGGFPTASLSLSTNDTAAQVLQYLRPNSNLEELIMKGYNGSSFPSWVGSLPLDRSTVSNVFPALESLKFRDMGAWEEWSEFKDEHFPQLKYLSIVRCAKLTVLPNFTSGPKQRIRSCEKLLQPLCQNIRRNLMKYIPPPSELSYACMAEGNISIIEASCSYSR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 1.857430 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0273700 | SBH | 0.485054 | 0.000000 | 2.608030 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g17220 | SBH | 0.182032 | 0.151617 | 0.169216 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0273700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0010110 | RBH | 0.388954 | 12.754090 | 3.725626 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0010230 | RBH | 0.000000 | 1.392676 | 3.342225 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0010020 | SBH | 0.116790 | 1.636573 | 2.672996 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0009830 | RBH | 0.215208 | 0.107500 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0010210 | RBH | 1.247593 | 5.594004 | 2.859850 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0184100 | SBH | 0.0403555 | 0.0031255 | 0.169466 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0010660 | RBH | 0.494047 | 0.415541 | 0.273530 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0180500 | RBH | 0.6667805 | 3.629898 | 2.1571425 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0010140 | RBH | 0.185791 | 0.121025 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0010200 | RBH | 0.401345 | 2.110905 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0010140 | RBH | 3.567895 | 7.294189 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0010150 | SBH | 0.000000 | 0.165833 | 0.041616 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0010050 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G010020 | RBH | 0.000000 | 0.000000 | 0.146784 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0009810 | SBH | 0.000000 | 13.573050 | 1.115876 |
