Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_07g0005500 | OGI:07013950 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr07:4833780-4843427 | ||||||||
| Gene Symbol | AGO14, OsAGO14 | ||||||||||
| DNA seq | agatcatggcatgtcaactaatccgcagaaataatttagatcatgacctgtctttcaaacatcacacataaccccaaaaaaatacacttcgagaaacatacaactatcgagtagcagctgcatcaacatcacagatcacaagttcaacaacaggttaacatgtcccaaatgacaccatcacaatttcagagatagcacagtacactaacagcctgaatgaatactgacgagcgaccaacaaaatgtttgtagttaaaacccaagctaggcgccgattcgatcagcagtagaacatcacgtccttgacgttctccttgatctgcgggaggcggcgcaccgccggtggctggccgccggccgccgcctggttgccgccgctgccgaccgacgaagctccgtccatggcggggggctcatcgtagtacctcgcccggaatgctgccaggtgagcgtagtaggctggagggactgcacaaacatgatggatgtgtgttatcttcagtatatttatttttctaataagccagcacttcgagtgtgccaattttatttagagcactgctacacgtaggccgtgtttagttccaaaatttttctttaaactttcaaTtttttcatcacatcaaaactttcttacacacacaaacttctaacttttccgtcacattgttccaatttcaacaaaacttccaattttggtgtgaactaaacacaacctactaattttttattaacaatcatctcaaccgtttgatttaaatagatagaagttacaataaatctagatgcacttatgacaccagcgttagtaataagaatttagtaagaaaaagtaagtacgtataatcgttcccttttattaaatatacccgaggaaaaataagaagtgtaagtatgaaaaatgcattatctttagtttaaagatagaaaaagaaacaaaggtaaatttagctctatggaaaataagctgtgcaagtatggaaaatttaaaaagatagaaaaaaacaagctctagaagtatgaaaaatgtgttatttcagctagagcattaggatgaaagcttaccaacagagacagaccgggtgcatcgagcgtagctggaaaatttcaaggcaaagatcaggtcaggtttatggatggtacaaattaacaacgcaaaagttgagaaacaattcagaggcttacgtgtaacacaaattgtaagtgagcatctgcagctgatcggcactaaaacggttctcgtcatggagaacgtggtagtgggttggtctgcttgttccctggacagacaagagcaatttcacatcattgatatttcagtcgtctacaaagataaatgggaaaaaaagaaatccacgatgagcaaaataaaattgttgtgtaaatatatatctacctggattccggcatggctgcacaggtagaagtcgaactcactagggtggcaaatgttagtgtcaaccacggttcctgcatatataccagaaagtgtatcagacacacaatcttacacacacacacacagacacacaaacacacacagaatttagaaaaaaagacaattacaagatattatgtaatacacaatcacaggcatcacactaattatgtgttttctggtaacagatagctaggattcataatttcataggcaaattatatacctggacgaacatttccacttctgtccgtcagatcttgccttccatgcacctcagggaagagccttgtgtggtgcctcttctggacaaccacaaatgtcaccaggggcctgtatgctgggtccaaagatgcaatagcctttgaacaaaaaaatatatgaaaatgtcatgaagcaacctacatgataaaagtgtagttacgtacataatcaaagatcattaccttcttgattgcgtccatctcatagagcagaacatgaaggaattgtccatcacttacaccatccctgcgtgtgcaaaacattaccaaattacaaataggtccagatttggatgcatattattctaaggaattataaaatccaagtttatctaggtatctagtaatttgacacaatagagacatgatttgaagtggatacctgtaaaatattatcctttgaggcttacgtttagcattcttactgtagaatgacataagcaactccctgcaaaaaaaaaaagtgaaaagagcatctaagtttcaagccaaaatgtcattgccactttctcaatttgatctcaggacaaaaaagaaaaactaacctgaacattccgccgcatatgaaattcttcttcgaaccttcagccttctgtgctggagcatcagcattctgcgcaacttcagtcatggtgaagagatcttgtataatctcctgccgaggtggctgggcagagacgagggctttgtacttggtgatctcaggccagtccatggaggccaccacctgcgtcacaatgttaatttttttaaaaaaatatttcatcaaaataaattccattcaattatccactaaaatttcgtttagttcaattcattcaacgatgaagtaaacaatttgatgtcaggaaatgagagaaactaacagctgcgatcgacgccgatgagtcctctccagaagcaggatgggtgacatcggcaccaaaaattattgttgtgttttcaagcccaccgggtacaagaggtctctgaagaactgagttgcgtcctccagcctgatcaagacagtgtaaacatctctccattgaacacctaattcgtatataaaacggagagggagatttttaagtgattttaagtgcagtggccacaaacaaagcttaccttgacattgattttgagtgagacattttccaggaactgcctgtctaagctcaagagcttgcggcctggcttgaggcactgggatactatcccaagttcagtctcacacaccctcttaattcttcctgcaaaattgcacagtttactgtgtaaatatatactggaagagcttgcagtcatattaattaactaagaatgtgtacataccataatacccattaacatctgggagaatcacaatgagcagctggagttgaggagcccttgtgtgaatgttgctcagggcagcttcgatgttattaggagcagctgaccccacctctatctctggcatttcattgaaaacctacgaagacaaacacggtgttatatgtgctgactaacaattcaaacttaaatatattcataagcataacacaagctcaccatgccaatagcattgcatgtataaactagttcgccgcatagtctgtgcacggcatcaatatgcatgcgtgaaaaattcacgcaagtccacttttgaaccacagctccaccaaccattttctgggagaaaacaaacaaatgtgcaagtgaacaacagaaagaaggctattcaaatctagtattgcatatgttaatagtttcgtattaaaagctttcatgtgtcatccactaattcttccaaaatgaaaagtgtgacatccactatattgcgatcacaagtttcaaagacatgcaatgagcagagcacaaccaatctctacaaggtcggtatgatgaattatttcaagtaatgtcaaataatagtaataacacagaaattatattgtaaaaaaaattgttcagggaagcattcaacattgtatcaccttattgatcatattccattgcccaactctgggattacaagttttctcctttccagagtcatggtatctcagctgaaacaacgtaaaaggtcacataagtataaaaatacaggagattaaaaaaaacaccaaaatgagttgtagaatagctaccgtgggcgcaggcagcacgcgagctggcatagtggccatctgattggaaatattaattctaaaatcactcaccaccttatcagccgggtagttgttgtgttgaaccatctatacaataaataaatataatcgtgttagatcgttagtagttataacacgtatgttaaaacatcaaaatgtcccaatctttgtttgataaataaataggagtgatgttttttttcctcatgaccaaattagaatgttggatgcatgcttaacaaaattctaaaagaagaatgtgggttgtccattaattagggatgcaccactttatgtgtactacaataaatgacatgttttgaattttttttttgagtaaatgcaacacatttgattaaacatacacacaatatctagaatggtaacacaggtacctcatggctaaaagtatctcgagataccaaattttacagtaaaaaaatgtgtaccttttagtacattatcaaggatgataaaattaccattattgataatatctcacataaagaaagagatgcatgggactcttgaaaaatcattatataagcactaaaagtaattactctcctggtctacaaaagatgggtaattttaccgtccttgagaaggtactagagtttagaggtaccataTttttctaggataaaatttaatacctctagatacaaagtacctcaaggtaccaaaaattttagtgtaaaatttaggtacctttttaaggaccgtaaaattcctcacaaaagaaggtaatgtcaaatgtcaatatatgtgagctggacacttacctcaatgattttctgctcccttttctggggaggctggcatgttgctctcaggaggccagtcacttgtttgtcattgagcttcttggagtatctttgcccttctacaatggtgcatacctacaaacgtgttatatgcacagttagtataatgtatctggaatcatgcacaaaagaaatgcacaatttacctccattggcaaatatatagggttagaagggttgccggattgcagacagggccaagacgtgtactgcagcctgtatttgtaccgctgcgagaagtactgaataacagtctgggtagttccatccatagaaaagctagaaacagaaaatggcaagatacaagttgtgagtttagaaagtatgattatagtttatagagcacataagcaagggggagaagagaggaacaattacttcagctgactcagtggctcagatgtaatcgtagtgatcttgtacttgctgctcttcccctggtgtgttgtttcaacacgaactccccgtagtgctttcttaacctggagaacaaattttaagtagaataaagaagtcagtaactatagataagttattgggtcacacattttggttgagaaatttgtaccttcaggcgatcaatgtcagaaagaggccgcctagggtcagggccattagcattagtaggtgtgcccagacaattcttgacatattctaccacgctgataggtttgaagaatggggtagaggatatgtctgaaagcacgaggacccaatcaagattcaagagttagtaacaatgctaataaaccatgcataaaaagagctgcataagtaaatcttgtgaaaataaaaattgaactgtaagatgtttttgcatgttcacattactttgtgtcttacagttatgaattctttttggttgtgtgtgaaacattgtaaaagtgttcaatatactaatggggatgccggtttccataaaaaccaatgtgcgtgtgtgcgcctataaaggcctagcaaacaaaacaaatagtaaataggcttgctttgtgtaaatataagttcaacacaactgaacaaaattaatgggaagtgttgtctactttggcaagaaagaaaataaggaaaccacctagcaaaaatgaatgtgtagggtgcatattttgccaaaatttcaatatagaggcccaaataaaactgaattggattatttgtgtcatcaattatccgcccaaaataaagaggttttagagatgattatgcacctatgttcaatgagagtcccatctgagttgggcgcaggctctgatagtatcctttccagcattccagcccatcaccaatgtcttgtcggccgaacatagtggagtagaacgaccgagaaacgatgacatagctgcaaaatgcaaagatatcaagaaatcaatcttatggtctaaaacgtttttgcctcctaaaaaagtgattatgacgaaaggcatcatacttcagagaaggtgactccctcagtacaacgtccagtgcttggatcgtttgctgctgagagtccctctgccggccggcgatgaactcgtgcaggtggtgcagatctgcttggccagcacgtcgaattgtcaccttgtactcgcttaattttcaattgaaaaggcaaacattaaacggttcattagttagttggtgcattccacaaataagtatcgtaccaagctagagtgctcaaaatgtgtagttaaacattatccacaaataagtagtctagcatgtgtactagacattttccaaaaataagtggcctagttagagtgcacaaaatgtagaagacattttccagaaataagtaacctagctagatgtacaaaatgtactaaacacatatcagaaaaacaagaaacctagctagagtacacaagtgttagtaaacattaattaggagtgacaatgctcacatttccctgagctctttgcccagcttgatcttgaagtccatggagtcgaacggcagtttccctgcagtgtacagggccttgcttccgtcgtacgcgaagcttatgccaccgagatgcgactcacggtgcaacctggccagctcagacatcactaccctgttgatgcgcctggtctttggtgggggactcaaactcacctgaaaaaaaaaagatgcatgcagtctaatcgtcaaaaaggataggaacgactaggatcgctaacaatgagttataaaaccaactataaaacttacctaaaagagagacaaacaaaagtaacaagtgtttgttctcatacaaaagctagatctacacatgtttcaagatatgtgttaaattcatagtgagagaaaaagggagtagggaaaaatttgagctaaccatagctaacctattatacatgtcagggctggctctgggcctaggcgggttgtgcgaccggctaggtcccagagcagagtggggccatcactctaagaaacgcatttaactcatgctcgttgcatgctacaacaatagtacaagctacaacctttttgacccacttactctctctcatcacattgttcacctccagctcggcatcaaggctagcatggtatttctaatagctagtagctagcgtagtatttgtacttgctcttacctgttctcagtccataaattgacaagtttcatcctttcaatctttcactttctactcactaatccaattttctttttaatgagggacattttggtcttttattgtcactaaatgttcccactcaccaatacaacttttctacaaatgagggacattttggtcttttgttctcattaaatgttcctacccaccaatacaagtttgctattcacgagaggtattttgatctgttgttctcactaagtgttcctcaagatgtgagggatattggtttattttaggacaaaaggggtatatgctaaatgtcaatcactttttcccatggttaagattgctcaaagattcgtgtgggctctataataatctaaccctaatcctccatctcactcaatccccttataccccgcgcgccgtcacccccaccctccctccctcgtacccctcacgccgccacctccacccccactaatccaactttcttattaacgagggggtattttgatcttttattctcactaaatattcccactcaccaatacaatttttctattaacgaggggtattttgtctttttttcacattaaatgttcccacccaataatgaggggtatttaggtcttttgttctcctcaggatgcgagggatattgatttattttaggacaaagggggtatatgctaaatgtcaatcacttttttggatggctaagattgcccgaagattcgtgcatttctaaccctaatatcccccctctcactccctcccctcatccccgcgcgccgccacccctaccctaccttcctcaaaccccacgagttctccgtcagattccgccgccactattatcgtcttcctcaagtttgccaccgatacccctacatgcctctcctctaccatttccctcacctctcctagctagtccgatgagattcctcgccaccaacatcaaatcaccgttctccttctcccatgcggctgaggctgcgccgcctcggtcatccctctaaacccgaagatcccccttcttccaccacatgcacaccacccaaacccctacttcagggcacaaatagcaaagatgaaagacacaggaactctactaagatctcatcaaccaggcaaccacacagtggaccaagacccttttcctcaatcagcaaccagatcaactctgcacagatgcacgaggctactacctaaggattcagacagagatgtggtgataacaacaaaaccgagcaacagcgagagaccgaagtactaaaggtctaaagccacgatttagccgcgagagctgagttgatgatggataccgaaaatgaagcaagcacggcacatggcccctctgcggagctttcgcccaaaacggcaacccgaaaactaccgcgtgtatacaagataaaggtaaaaaaaaaaagaatgagaagatgatgaagataaaaaataatactccaccagatgtagtactccagtacactgtaatctaatactgctagaagtatacgaatcgcttgatcgattcgtgaatcgcatcgcaacgaatttattctactagtctacgagggatgaaagcgatttactagagatataatcgcaacgaaagcgaaatgaaaggggaactggaagaacgagtagggttaatgtagctaggggaggcttacgtcgtagaggtagatcatgtcgttgtcggagacgcggacgaggaaatggttcgcgcgcaccacgatcctctcccccaccgtcccgaaccccggccgcgacggcggcgcgacgcccttgctcgacaccgggatgggcgccggcggcgccgcggggggagcggggcggcccccgcccgccacgacagccagctgcctcccaacgtccctcgcgagggcagaaaccgccgcggctgccggaggaggctgcgccgccgccgctggctgcgctgacgacgacgacgccaccgcggggatctggaccgcgggagtaggaggaggagtactccgagcagcaacagcaaccggaccaggagtcgacgccgccggagccgcggccatagcagggcgaacgccatctccgccgccgccgccacggccacggccgcgtccgccgtccccgcgcccgccgccgccgccgcctccagttcctcgaccaacgacaccaccagcagcaggggcaggaccacggccgcccccgtcgccgcggccgtagcccggctgctgctgctgcgggtggccgcctccccttccgccgcctcgcccaccggccgggccgcgccctctaccgtcccgcccaccgaggggcccgcgccctcctccgacgaggccgtcgccgccgcgtgacgccatgagaggcaaagagggttttgtctgggtgggagagtaagcggaggcgaggtcgccgaggcagagagagagagagagagtgggttgatgaga
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| CDS seq | atggcgtcacgcggcggcgacggcctcgtcggaggagggcgcgggcccctcggtgggcgggacggtagagggcgcggcccggccggtgggcgaggcggcggaaggggaggcggccacccgcagcagcagcagccgggctacggccgcggcgacgggggcggccgtggtcctgcccctgctgctggtggtgtcgttggtcgaggaactggaggcggcggcggcggcgggcgcggggacggcggacgcggccgtggccgtggcggcggcggcggagatggcgttcgccctgctatggccgcggctccggcggcgtcgactcctggtccggttgctgttgctgctcggagtactcctcctcctactcccgcggtccagatccccgcggtggcgtcgtcgtcgtcagcgcagccagcggcggcggcgcagcctcctccggcagccgcggcggtttctgccctcgcgagggacgttgggaggcagctggctgtcgtggcgggcgggggccgccccgctccccccgcggcgccgccggcgcccatcccggtgtcgagcaagggcgtcgcgccgccgtcgcggccggggttcgggacggtgggggagaggatcgtggtgcgcgcgaaccatttcctcgtccgcgtctccgacaacgacatgatctacctctacgacgtgagtttgagtcccccaccaaagaccaggcgcatcaacagggtagtgatgtctgagctggccaggttgcaccgtgagtcgcatctcggtggcataagcttcgcgtacgacggaagcaaggccctgtacactgcagggaaactgccgttcgactccatggacttcaagatcaagctgggcaaagagctcagggaaatcgagtacaaggtgacaattcgacgtgctggccaagcagatctgcaccacctgcacgagttcatcgccggccggcagagggactctcagcagcaaacgatccaagcactggacgttgtactgagggagtcaccttctctgaactatgtcatcgtttctcggtcgttctactccactatgttcggccgacaagacattggtgatgggctggaatgctggaaaggatactatcagagcctgcgcccaactcagatgggactctcattgaacatagacatatcctctaccccattcttcaaacctatcagcgtggtagaatatgtcaagaattgtctgggcacacctactaatgctaatggccctgaccctaggcggcctctttctgacattgatcgcctgaaggttaagaaagcactacggggagttcgtgttgaaacaacacaccaggggaagagcagcaagtacaagatcactacgattacatctgagccactgagtcagctgaacttttctatggatggaactacccagactgttattcagtacttctcgcagcggtacaaatacaggctgcagtacacgtcttggccctgtctgcaatccggcaacccttctaaccctatatatttgccaatggaggtatgcaccattgtagaagggcaaagatactccaagaagctcaatgacaaacaactgagataccatgactctggaaaggagaaaacttgtaatcccagagttgggcaatggaatatgatcaataagaaaatggttggtggagctgtggttcaaaagtggacttgcgtgaatttttcacgcatgcatattgatgccgtgcacagactatgcggcgaactagtttatacatgcaatgctattggcatggttttcaatgaaatgccagagatagaggtggggtcagctgctcctaataacatcgaagctgccctgagcaacattcacacaagggctcctcaactccagctgctcattgtgattctcccagatgttaatgggtattatggaagaattaagagggtgtgtgagactgaacttgggatagtatcccagtgcctcaagccaggccgcaagctcttgagcttagacaggcagttcctggaaaatgtctcactcaaaatcaatgtcaaggctggaggacgcaactcagttcttcagagacctcttgtacccggtgggcttgaaaacacaacaataatttttggtgccgatgtcacccatcctgcttctggagaggactcatcggcgtcgatcgcagctgtggtggcctccatggactggcctgagatcaccaagtacaaagccctcgtctctgcccagccacctcggcaggagattatacaagatctcttcaccatgactgaagttgcgcagaatgctgatgctccagcacagaaggctgaaggttcgaagaagaatttcatatgcggcggaatgttcagggagttgcttatgtcattctacagtaagaatgctaaacgtaagcctcaaaggataatattttacagggatggtgtaagtgatggacaattccttcatgttctgctctatgagatggacgcaatcaagaaggctattgcatctttggacccagcatacaggcccctggtgacatttgtggttgtccagaagaggcaccacacaaggctcttccctgagggaacaagcagaccaacccactaccacgttctccatgacgagaaccgttttagtgccgatcagctgcagatgctcacttacaatttgtgttacacctacgctcgatgcacccggtctgtctctgttgtccctccagcctactacgctcacctggcagcattccgggcgaggtactacgatgagccccccgccatggacggagcttcgtcggtcggcagcggcggcaaccaggcggcggccggcggccagccaccggcggtgcgccgcctcccgcagatcaaggagaacgtcaaggacgtgatgttctactgctga
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| Protein seq | MASRGGDGLVGGGRGPLGGRDGRGRGPAGGRGGGRGGGHPQQQQPGYGRGDGGGRGPAPAAGGVVGRGTGGGGGGGRGDGGRGRGRGGGGGDGVRPAMAAAPAASTPGPVAVAARSTPPPTPAVQIPAVASSSSAQPAAAAQPPPAAAAVSALARDVGRQLAVVAGGGRPAPPAAPPAPIPVSSKGVAPPSRPGFGTVGERIVVRANHFLVRVSDNDMIYLYDVSLSPPPKTRRINRVVMSELARLHRESHLGGISFAYDGSKALYTAGKLPFDSMDFKIKLGKELREIEYKVTIRRAGQADLHHLHEFIAGRQRDSQQQTIQALDVVLRESPSLNYVIVSRSFYSTMFGRQDIGDGLECWKGYYQSLRPTQMGLSLNIDISSTPFFKPISVVEYVKNCLGTPTNANGPDPRRPLSDIDRLKVKKALRGVRVETTHQGKSSKYKITTITSEPLSQLNFSMDGTTQTVIQYFSQRYKYRLQYTSWPCLQSGNPSNPIYLPMEVCTIVEGQRYSKKLNDKQLRYHDSGKEKTCNPRVGQWNMINKKMVGGAVVQKWTCVNFSRMHIDAVHRLCGELVYTCNAIGMVFNEMPEIEVGSAAPNNIEAALSNIHTRAPQLQLLIVILPDVNGYYGRIKRVCETELGIVSQCLKPGRKLLSLDRQFLENVSLKINVKAGGRNSVLQRPLVPGGLENTTIIFGADVTHPASGEDSSASIAAVVASMDWPEITKYKALVSAQPPRQEIIQDLFTMTEVAQNADAPAQKAEGSKKNFICGGMFRELLMSFYSKNAKRKPQRIIFYRDGVSDGQFLHVLLYEMDAIKKAIASLDPAYRPLVTFVVVQKRHHTRLFPEGTSRPTHYHVLHDENRFSADQLQMLTYNLCYTYARCTRSVSVVPPAYYAHLAAFRARYYDEPPAMDGASSVGSGGNQAAAGGQPPAVRRLPQIKENVKDVMFYC |
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| Function | Protein argonaute 14 [UniProtKB/Swiss-Prot:Q6Z4F1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0005500 | OsCMeo_07g0005500.01 | Chr07 | 4834060 | 4843337 | - | NAM | ||
| CDS seq | atggcgtcacgcggcggcgacggcctcgtcggaggagggcgcgggcccctcggtgggcgggacggtagagggcgcggcccggccggtgggcgaggcggcggaaggggaggcggccacccgcagcagcagcagccgggctacggccgcggcgacgggggcggccgtggtcctgcccctgctgctggtggtgtcgttggtcgaggaactggaggcggcggcggcggcgggcgcggggacggcggacgcggccgtggccgtggcggcggcggcggagatggcgttcgccctgctatggccgcggctccggcggcgtcgactcctggtccggttgctgttgctgctcggagtactcctcctcctactcccgcggtccagatccccgcggtggcgtcgtcgtcgtcagcgcagccagcggcggcggcgcagcctcctccggcagccgcggcggtttctgccctcgcgagggacgttgggaggcagctggctgtcgtggcgggcgggggccgccccgctccccccgcggcgccgccggcgcccatcccggtgtcgagcaagggcgtcgcgccgccgtcgcggccggggttcgggacggtgggggagaggatcgtggtgcgcgcgaaccatttcctcgtccgcgtctccgacaacgacatgatctacctctacgacgtgagtttgagtcccccaccaaagaccaggcgcatcaacagggtagtgatgtctgagctggccaggttgcaccgtgagtcgcatctcggtggcataagcttcgcgtacgacggaagcaaggccctgtacactgcagggaaactgccgttcgactccatggacttcaagatcaagctgggcaaagagctcagggaaatcgagtacaaggtgacaattcgacgtgctggccaagcagatctgcaccacctgcacgagttcatcgccggccggcagagggactctcagcagcaaacgatccaagcactggacgttgtactgagggagtcaccttctctgaactatgtcatcgtttctcggtcgttctactccactatgttcggccgacaagacattggtgatgggctggaatgctggaaaggatactatcagagcctgcgcccaactcagatgggactctcattgaacatagacatatcctctaccccattcttcaaacctatcagcgtggtagaatatgtcaagaattgtctgggcacacctactaatgctaatggccctgaccctaggcggcctctttctgacattgatcgcctgaaggttaagaaagcactacggggagttcgtgttgaaacaacacaccaggggaagagcagcaagtacaagatcactacgattacatctgagccactgagtcagctgaacttttctatggatggaactacccagactgttattcagtacttctcgcagcggtacaaatacaggctgcagtacacgtcttggccctgtctgcaatccggcaacccttctaaccctatatatttgccaatggaggtatgcaccattgtagaagggcaaagatactccaagaagctcaatgacaaacaactgagataccatgactctggaaaggagaaaacttgtaatcccagagttgggcaatggaatatgatcaataagaaaatggttggtggagctgtggttcaaaagtggacttgcgtgaatttttcacgcatgcatattgatgccgtgcacagactatgcggcgaactagtttatacatgcaatgctattggcatggttttcaatgaaatgccagagatagaggtggggtcagctgctcctaataacatcgaagctgccctgagcaacattcacacaagggctcctcaactccagctgctcattgtgattctcccagatgttaatgggtattatggaagaattaagagggtgtgtgagactgaacttgggatagtatcccagtgcctcaagccaggccgcaagctcttgagcttagacaggcagttcctggaaaatgtctcactcaaaatcaatgtcaaggctggaggacgcaactcagttcttcagagacctcttgtacccggtgggcttgaaaacacaacaataatttttggtgccgatgtcacccatcctgcttctggagaggactcatcggcgtcgatcgcagctgtggtggcctccatggactggcctgagatcaccaagtacaaagccctcgtctctgcccagccacctcggcaggagattatacaagatctcttcaccatgactgaagttgcgcagaatgctgatgctccagcacagaaggctgaaggttcgaagaagaatttcatatgcggcggaatgttcagggagttgcttatgtcattctacagtaagaatgctaaacgtaagcctcaaaggataatattttacagggatggtgtaagtgatggacaattccttcatgttctgctctatgagatggacgcaatcaagaaggctattgcatctttggacccagcatacaggcccctggtgacatttgtggttgtccagaagaggcaccacacaaggctcttccctgagggaacaagcagaccaacccactaccacgttctccatgacgagaaccgttttagtgccgatcagctgcagatgctcacttacaatttgtgttacacctacgctcgatgcacccggtctgtctctgttgtccctccagcctactacgctcacctggcagcattccgggcgaggtactacgatgagccccccgccatggacggagcttcgtcggtcggcagcggcggcaaccaggcggcggccggcggccagccaccggcggtgcgccgcctcccgcagatcaaggagaacgtcaaggacgtgatgttctactgctga
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| Protein seq | MASRGGDGLVGGGRGPLGGRDGRGRGPAGGRGGGRGGGHPQQQQPGYGRGDGGGRGPAPAAGGVVGRGTGGGGGGGRGDGGRGRGRGGGGGDGVRPAMAAAPAASTPGPVAVAARSTPPPTPAVQIPAVASSSSAQPAAAAQPPPAAAAVSALARDVGRQLAVVAGGGRPAPPAAPPAPIPVSSKGVAPPSRPGFGTVGERIVVRANHFLVRVSDNDMIYLYDVSLSPPPKTRRINRVVMSELARLHRESHLGGISFAYDGSKALYTAGKLPFDSMDFKIKLGKELREIEYKVTIRRAGQADLHHLHEFIAGRQRDSQQQTIQALDVVLRESPSLNYVIVSRSFYSTMFGRQDIGDGLECWKGYYQSLRPTQMGLSLNIDISSTPFFKPISVVEYVKNCLGTPTNANGPDPRRPLSDIDRLKVKKALRGVRVETTHQGKSSKYKITTITSEPLSQLNFSMDGTTQTVIQYFSQRYKYRLQYTSWPCLQSGNPSNPIYLPMEVCTIVEGQRYSKKLNDKQLRYHDSGKEKTCNPRVGQWNMINKKMVGGAVVQKWTCVNFSRMHIDAVHRLCGELVYTCNAIGMVFNEMPEIEVGSAAPNNIEAALSNIHTRAPQLQLLIVILPDVNGYYGRIKRVCETELGIVSQCLKPGRKLLSLDRQFLENVSLKINVKAGGRNSVLQRPLVPGGLENTTIIFGADVTHPASGEDSSASIAAVVASMDWPEITKYKALVSAQPPRQEIIQDLFTMTEVAQNADAPAQKAEGSKKNFICGGMFRELLMSFYSKNAKRKPQRIIFYRDGVSDGQFLHVLLYEMDAIKKAIASLDPAYRPLVTFVVVQKRHHTRLFPEGTSRPTHYHVLHDENRFSADQLQMLTYNLCYTYARCTRSVSVVPPAYYAHLAAFRARYYDEPPAMDGASSVGSGGNQAAAGGQPPAVRRLPQIKENVKDVMFYC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0005500 | OsCMeo_07g0005500.02 | Chr07 | 4833780 | 4843427 | - | IsoSeq | ||
| CDS seq | ctcatcaacccactctctctctctctctctgcctcggcgacctcgcctccgcttactctcccacccagacaaaaccctctttgcctctcatggcgtcacgcggcggcgacggcctcgtcggaggagggcgcgggcccctcggtgggcgggacggtagagggcgcggcccggccggtgggcgaggcggcggaaggggaggcggccacccgcagcagcagcagccgggctacggccgcggcgacgggggcggccgtggtcctgcccctgctgctggtggtgtcgttggtcgaggaactggaggcggcggcggcggcgggcgcggggacggcggacgcggccgtggccgtggcggcggcggcggagatggcgttcgccctgctatggccgcggctccggcggcgtcgactcctggtccggttgctgttgctgctcggagtactcctcctcctactcccgcggtccagatccccgcggtggcgtcgtcgtcgtcagcgcagccagcggcggcggcgcagcctcctccggcagccgcggcggtttctgccctcgcgagggacgttgggaggcagctggctgtcgtggcgggcgggggccgccccgctccccccgcggcgccgccggcgcccatcccggtgtcgagcaagggcgtcgcgccgccgtcgcggccggggttcgggacggtgggggagaggatcgtggtgcgcgcgaaccatttcctcgtccgcgtctccgacaacg
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| Protein seq | LINPLSLSLSASATSPPLTLPPRQNPLCLSWRHAAATASSEEGAGPSVGGTVEGAARPVGEAAEGEAATRSSSSRATAAATGAAVVLPLLLVVSLVEELEAAAAAGAGTADAAVAVAAAAEMAFALLWPRLRRRRLLVRLLLLLGVLLLLLPRSRSPRWRRRRQRSQRRRRSLLRQPRRFLPSRGTLGGSWLSWRAGAAPLPPRRRRRPSRCRARASRRRRGRGSGRWGRGSWCARTISSSASPTT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 8.342552 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0188000 | RBH | 0.0 | 0.0 | 4.031213 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g09020 | RBH | 0.0 | 0.0 | 1.046024 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0188000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0005630 | RBH | 0.0 | 0.0 | 3.563700 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0005590 | RBH | 0.0 | 0.0 | 1.691606 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0038160 | RBH | 0.0 | 1.292069 | 8.228833 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0005420 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0005570 | RBH | 0.000000 | 0.0 | 7.439783 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0080300 | RBH | 0.1786595 | 0.3673865 | 0.3567295 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0006110 | RBH | 0.0 | 0.0 | 0.856436 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0082300 | RBH | 0.2165765 | 0.2566215 | 0.971639 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0005530 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0005530 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0005570 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0005680 | RBH | 0.0 | 0.0 | 0.994524 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0005530 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G005710 | RBH | 0.0 | 0.0 | 1.243461 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0005490 | RBH | 0.0 | 0.0 | 5.523595 |
