Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_07g0001170 | OGI:07003400 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr07:1289122-1295398 | ||||||||
| Gene Symbol | MAPKKK11, OsMAPKKK11 | ||||||||||
| DNA seq | tcaaatgaaacatgttgggtaaatactagtatttataatcacaccattttgtacaaaaatacaacAaaaatatgattacacagcagtggaacctgttagatgagattagaataagggactttcaacttatctacagttattcctgattgtatgttacaaaaaaaaaatgccatcagaatatcccaaaacaatgaagatcccatgctttcatggatccgtcacattcagcaacatttagtcgcatgtccaaataggcaatcactattttacaagaacatgtaagctgtacaaattcatatagtgcaactattgcacaaaaatggttaacttagttaaagatggctgctgcaaaacttttatgtcttccatcacatgattgttagtgcaaggtatgtctcttctgggatgtcttccaccatttatcttattgctgtgtagctgatataacagcgcaacatccaagattcacaagatttatcttccttcttatatcttcctattctttctctgctttaattctataaatacagttaggaccgagttcgcattcaaagttgtgcacatgaacatgatccgagatggaaatcacactccccatggcatgcttgatatctttagaacagagcctccttttcattaggtcttggcaaaggactacgctgagagtttgcaatcggaaaatatacagtgttcactaaattggctgatggactaggattggaggttagacctaagggtctagaggagaagttaggtgcaacttcctggattgatagtggagtcaatcgaaaagctgacgattcggaaggcctagcattggttggctcactggcaaataaaacatgtcagctatgttatgatctaagaagatgaaaaatcaaataaaataacattttaaggtaagacagcactaaataaaaggaaactactcaccctacagtaatttttcctttcacgcaggaatcactcttcgaggctgctttgtctcttgaaccatttccattattattatcctgtcatataaagtgacatcacatactcatgtgggtggcaaagagcttatctgggagacatagacttacattggatttaatccccgcaaatgaatgtatggaaccatgtttgttgtaatgacttgaattccggataaatggatgctccaacagctcacttgcagttggtctctctgctggattcctcttgaaacagaattgcagaaaatctttgccctcatgagataaattgtcaggaattggtgggtctttatgcaaaactctaaacattgcagcaggctgtagaacaaaaatgatttattatgactagtgtttcagaataatacTtttttatgtatagttgttcatacccaaactaccaagccattcagtggctacacctatcacattaacatgttacataggtattacaatggttatgtgtgcgtgacacttgcattgaaacacaataattgataccaagaaatgttggttgggtgaagtggttcatatttagggattacaataggcagactacagtcatgacatgcatgttactaagcttcatgtaaagatgaacactccaagttcttaccccttcaagatcactccagggaggttttccattaaacatctcgataatggtacaaccaagactccagatatcaacagcaagatcataacccacatctttattaagtgtagcctgaaccatctgcaggagaagaaacaatctagatttcaataggcataaaggtacaagagtgtaacagaatttccgtagctcctttccgaagaatgttacagctaaatttatttgcattcgaaagtagaacttccaacacagctgtaaattagaaaaagcaatgttagtgaggttgtttcaggtcagacatctgtcgtactaaaccattgggtagcctaatcatctgagaccaactgaattaaagaatgtaatttcaattgaattaaagcaaacaagacaaaaccaaacctatcaacttcaaaaaacatttgcattatctgttacataaactgagtttgggttggagctgtacaagcccatgtgctgggcacatgtgtcggacaaagtatttttaTttttctgtatccatttaaatactgcaaccctacaattcaggaaccaaatccaggagaagctaaacaaagcgagctcctatctttagtatggataaaacagtataaggtcaaagaaaaacactgcatcatatggagctaccgcttatacagctcgatgtttgtttttctttgaaccttgatagaagatgttttaacttattaagaaacgtgtatgcctacctctggggccatccagtatggtgttcccttcagtgaaagattgggggctgcagtacttaactaaaagaaagagattaacataagcagtacattaaacagaatatatgtaataagggaatacatttattttaaaaattacccaaagcagagcatgttatcaaacggttccgtgcatatgactgagctaatagtaccacaaaatacaattatatgtcaaatagtgctgacaatgaacataaactcaatgggattcaagagctcaacaacatacagcagataaaagttatatgcacatatcaaatgcatccaacaactcccttgtttagtgatgctagttagatttggaaaaatattagatgatagcttaagctgttgctcagtcattctaaaatgacatgcaaatgctgtttaaaatggatatacacaataaagtaccatatgtacaaatgctactgtactctgtttgaggatatactcacatgcttggccattccaaagtcagctaatttgactacaccactaacatcaactagcaggtttgctcctttgatatccctgtaagagtcgacatgtttactttcacatacatgacataaggtaacataaattgaagcggagaccaacataaacaaaattctggaagtgcagaaagtactagtatcttcacaaaaaactaaaagagtaaagtacattggcggtccttaaatttgtagggttgtgtcatataggtccctaaactctaaaaatacatatccaggtaccagaacttgtcaaagtgtatcatctagatcccaaattgacacatccctctaggatcctacgtgacgctgatgtggcaatgccacatagacgtgacatgtccttttCttttttttccttctttcctttttctttttcgtgttGttttcattcttcttttctttccctttcttctgcacagatcacagagaaaggagaagaaagggaaaaaaagataagaaaaaaaataaaaacgaaaaaaataaatgggtcccatttgtcagtcaaaataatgccacgtcatgtttgtgtggcatgccacatcaacgccacgtaggatcgtaaagggattgtggtgatttgggacctagatgacacactatgacaagttctgggacttggatatgcattttgagagtttagggacctagatgacacacccctacaagtttaaggaccgcccgtacactttactcaaactaaaattagtttgatgttctccaacttttacatgcagcaaaatagcaattaaaaggataaatgatttgcataaagataatgattttctgaagtaatagcaagataggtgaaagtgaagatgaggcctgtgaggtgagcaagacacagttagacagaacatgccaaaataaactgagaaaagacagtttgtccatgttgaaatgaatatttaaaccaaaAGaaggatatgtaaagtactgcacacacacagcagttggagtcaaactaatagatgatgtagcaacaaaaaaatagtaaacaaggatagagatttgcacacacctatgcataatcttttggccatgcaaaaacgctaaacccctaagaatatggcgggtgaagttgcggacaactgattccgtcattgctccataatgttgtttgacatacttattaattgaacctgggtgaacatattccaggtaaatgtagaagcgatcttcaaactgcacgatccaaaaacaacttcagaataaatcatgacaatggacatacttgatcagatttccacagggacttacagtgtcacttccataatactgcactatgttttcgtgcttgaattggcttaggaactttatttcctgaaacataggaaactcagtgaacaaaggaaattgccaaaatgtcaagtcattggaggggaaaatactgcatttttcaacttgcagtgggaactaagaaatggagtacaaaatggagggcattagagtttagtttttttattcaaaggaagattgattgtatttagattgggcatagaagcttatttctcagcataaaaaaagtaaacaggaacactaatataacaatacatttagataaactaatggcagtgataaatggaagatttttatgttgccccaaatggacatcatgtaatcttatttaggacacagtcaattaacctgctctaactgcttcaaagactcggcagatttcgcatcatcaggaattatgttgacttctttcattgcacaaagagctccagtttgcctgcatgttaatgtcagtaaattgcattcaaagctcaacatgaagtagcatccgtaaatttgataacaccaaaaaaagaaaaacactcacataccgattggtagcttcatatacacagccaaatgtgccgctaccgaggagtcttcccttttgccactgaccagccactgagggcATTTCAACTTTTGGAGCAGACTGGTTAACAATGCTTGTCTGCATTGAGTTTATAGCTCCAGGAGGGCGTGGTAATGGGTGGAAACTGACATTCCCATTGCCTTCAATACGTGACATATTATTTTCTGGGAATAAttttgggtgcagaggtgatggaggggcactggaattcttcgacattagaataggacttctcaatgagttagaaaaagttgattgctctgtaaCccctgtatatatttcaggtgaaatccgcggagatgaagttgccatagaatctaccgagcggacagatggagcggaccacgcttggggaccttgagcagttggtgtcgtatattcggcattgctgaatcttcgagggctgcacacggggcttgaaaacccactgcttggagcacttttagcaggaatgttcaaccgaaagttggcagtttcagttgaactcttatcttggaacttctctcggaacaccttcctgtggtgactagaggtggtagtacgctttgaactattgtcaggaagattattattattatcaggAaaattttgaacaatctggcttgtcaccctgcaaccacaagacaagtgagcatcaggaaacaacatagatttgcagtttcaggttaacattgctatgcccaacatccaaatgcctaatcaatcacaaaatttgcaccttcctatgcgtcttaatctcttcgcagcataacaaaaacttaatttattttgaggaaaacaatcacattttaccttgcatcgcatcaattaaatacaaaaaaaaatctcttgatcatcatcacatacataataattcattcaatcgcaggattcgacatgatccaataattcagaggggaaaagaattataaaatataatcacattacctcgtcgccctctcgccaccaacatccggctccgacgtgtccgattccaccggcttgggagacggcagcggcagcgggagcagcacgggcgacgccgccgtggcGgccctcggcggcggctggtgcacggctctgaactcggcggagctcgcggacctcgcgatcgggatcgagacggggtggccgacggccgcggacgtggaggcgcggcctctggggggaggcgaggagttcgcgacgacgaggccgaggctctcgagcccgacgccgatgtcgtcgacgtggcgcagcttccgctgccgcgtgagctgcctgcgccgcgcgaggaggaggcccccggcgtcatcggcgcacctgccggcggcgctgcggcggccgggcgccgcgcacgacgaggtggaggccctcgccggcgaggccggggcggaggagacggcggaggagcgctggaacgccgacttggagcgcttccacCAcgtcggcatcacggaggcctgcggcgaccaggaggcccgtgcgcgtagggttaatggcatcggaggcggagaggaggagggcggcggagttggtgggcggcgacggagacggcgacgacggcgacctcctccatttggggcggcctctctttttttTAaaaaaaaaattcaatc
More
|
||||||||||
| CDS seq | atgccattaaccctacgcgcacgggcctcctggtcgccgcaggcctccgtgatgccgacgTGgtggaagcgctccaagtcggcgttccagcgctcctccgccgtctcctccgccccggcctcgccggcgagggcctccacctcgtcgtgcgcggcgcccggccgccgcagcgccgccggcaggtgcgccgatgacgccgggggcctcctcctcgcgcggcgcaggcagctcacgcggcagcggaagctgcgccacgtcgacgacatcggcgtcgggctcgagagcctcggcctcgtcgtcgcgaactcctcgcctccccccagaggccgcgcctccacgtccgcggccgtcggccaccccgtctcgatcccgatcgcgaggtccgcgagctccgccgagttcagagccgtgcaccagccgccgccgagggcCgccacggcggcgtcgcccgtgctgctcccgctgccgctgccgtctcccaagccggtggaatcggacacgtcggagccggatgttggtggcgagagggcgacgagggtgacaagccagattgttcaaaatttTcctgataataataataatcttcctgacaatagttcaaagcgtactaccacctctagtcaccacaggaaggtgttccgagagaagttccaagataagagttcaactgaaactgccaactttcggttgaacattcctgctaaaagtgctccaagcagtgggttttcaagccccgtgtgcagccctcgaagattcagcaatgccgaatatacgacaccaactgctcaaggtccccaagcgtggtccgctccatctgtccgctcggtagattctatggcaacttcatctccgcggatttcacctgaaatatatacagggGttacagagcaatcaactttttctaactcattgagaagtcctattctaatgtcgaagaattccagtgcccctccatcacctctgcacccaaaaTTATTCCCAGAAAATAATATGTCACGTATTGAAGGCAATGGGAATGTCAGTTTCCACCCATTACCACGCCCTCCTGGAGCTATAAACTCAATGCAGACAAGCATTGTTAACCAGTCTGCTCCAAAAGTTGAAATgccctcagtggctggtcagtggcaaaagggaagactcctcggtagcggcacatttggctgtgtatatgaagctaccaatcggcaaactggagctctttgtgcaatgaaagaagtcaacataattcctgatgatgcgaaatctgccgagtctttgaagcagttagagcaggaaataaagttcctaagccaattcaagcacgaaaacatagtgcagtattatggaagtgacacttttgaagatcgcttctacatttacctggaatatgttcacccaggttcaattaataagtatgtcaaacaacattatggagcaatgacggaatcagttgtccgcaacttcacccgccatattcttaggggtttagcgtttttgcatggccaaaagattatgcatagggatatcaaaggagcaaacctgctagttgatgttagtggtgtagtcaaattagctgactttggaatggccaagcatttaagtactgcagcccccaatctttcactgaagggaacaccatactggatggccccagagatggttcaggctacacttaataaagatgtgggttatgatcttgctgttgatatctggagtcttggttgtaccattatcgagatgtttaatggaaaacctccctggagtgatcttgaagggcctgctgcaatgtttagagttttgcataaagacccaccaattcctgacaatttatctcatgagggcaaagattttctgcaattctgtttcaagaggaatccagcagagagaccaactgcaagtgagctgttggagcatccatttatccggaattcaagtcattacaacaaacatggttccatacattcatttgcggggattaaatccaatgataataataatggaaatggttcaagagacaaagcagcctcgaagagtgattcctgcgtgaaaggaaaaattactgtaggtgagccaaccaatgctaggccttccgaatcgtcagcttttcgattgactccactatcaatccaggaagttgcacctaacttctcctctagacccttaggtctaacctccaatcctagtccatcagccaatttagtgaacactgtatattttccgattgcaaactctcagcgtagtcctttgccaagacctaatgaaaaggaggctctgttctaa
More
|
||||||||||
| Protein seq | MPLTLRARASWSPQASVMPTWWKRSKSAFQRSSAVSSAPASPARASTSSCAAPGRRSAAGRCADDAGGLLLARRRQLTRQRKLRHVDDIGVGLESLGLVVANSSPPPRGRASTSAAVGHPVSIPIARSASSAEFRAVHQPPPRAATAASPVLLPLPLPSPKPVESDTSEPDVGGERATRVTSQIVQNFPDNNNNLPDNSSKRTTTSSHHRKVFREKFQDKSSTETANFRLNIPAKSAPSSGFSSPVCSPRRFSNAEYTTPTAQGPQAWSAPSVRSVDSMATSSPRISPEIYTGVTEQSTFSNSLRSPILMSKNSSAPPSPLHPKLFPENNMSRIEGNGNVSFHPLPRPPGAINSMQTSIVNQSAPKVEMPSVAGQWQKGRLLGSGTFGCVYEATNRQTGALCAMKEVNIIPDDAKSAESLKQLEQEIKFLSQFKHENIVQYYGSDTFEDRFYIYLEYVHPGSINKYVKQHYGAMTESVVRNFTRHILRGLAFLHGQKIMHRDIKGANLLVDVSGVVKLADFGMAKHLSTAAPNLSLKGTPYWMAPEMVQATLNKDVGYDLAVDIWSLGCTIIEMFNGKPPWSDLEGPAAMFRVLHKDPPIPDNLSHEGKDFLQFCFKRNPAERPTASELLEHPFIRNSSHYNKHGSIHSFAGIKSNDNNNGNGSRDKAASKSDSCVKGKITVGEPTNARPSESSAFRLTPLSIQEVAPNFSSRPLGLTSNPSPSANLVNTVYFPIANSQRSPLPRPNEKEALF |
||||||||||
| Function | Mitogen-activated protein kinase kinase kinase 5 [UniProtKB/Swiss-Prot:Q9C5H5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0001170 | OsCMeo_07g0001170.01 | Chr07 | 1289122 | 1295398 | - | NAM | ||
| CDS seq | atgccattaaccctacgcgcacgggcctcctggtcgccgcaggcctccgtgatgccgacgTGgtggaagcgctccaagtcggcgttccagcgctcctccgccgtctcctccgccccggcctcgccggcgagggcctccacctcgtcgtgcgcggcgcccggccgccgcagcgccgccggcaggtgcgccgatgacgccgggggcctcctcctcgcgcggcgcaggcagctcacgcggcagcggaagctgcgccacgtcgacgacatcggcgtcgggctcgagagcctcggcctcgtcgtcgcgaactcctcgcctccccccagaggccgcgcctccacgtccgcggccgtcggccaccccgtctcgatcccgatcgcgaggtccgcgagctccgccgagttcagagccgtgcaccagccgccgccgagggcCgccacggcggcgtcgcccgtgctgctcccgctgccgctgccgtctcccaagccggtggaatcggacacgtcggagccggatgttggtggcgagagggcgacgagggtgacaagccagattgttcaaaatttTcctgataataataataatcttcctgacaatagttcaaagcgtactaccacctctagtcaccacaggaaggtgttccgagagaagttccaagataagagttcaactgaaactgccaactttcggttgaacattcctgctaaaagtgctccaagcagtgggttttcaagccccgtgtgcagccctcgaagattcagcaatgccgaatatacgacaccaactgctcaaggtccccaagcgtggtccgctccatctgtccgctcggtagattctatggcaacttcatctccgcggatttcacctgaaatatatacagggGttacagagcaatcaactttttctaactcattgagaagtcctattctaatgtcgaagaattccagtgcccctccatcacctctgcacccaaaaTTATTCCCAGAAAATAATATGTCACGTATTGAAGGCAATGGGAATGTCAGTTTCCACCCATTACCACGCCCTCCTGGAGCTATAAACTCAATGCAGACAAGCATTGTTAACCAGTCTGCTCCAAAAGTTGAAATgccctcagtggctggtcagtggcaaaagggaagactcctcggtagcggcacatttggctgtgtatatgaagctaccaatcggcaaactggagctctttgtgcaatgaaagaagtcaacataattcctgatgatgcgaaatctgccgagtctttgaagcagttagagcaggaaataaagttcctaagccaattcaagcacgaaaacatagtgcagtattatggaagtgacacttttgaagatcgcttctacatttacctggaatatgttcacccaggttcaattaataagtatgtcaaacaacattatggagcaatgacggaatcagttgtccgcaacttcacccgccatattcttaggggtttagcgtttttgcatggccaaaagattatgcatagggatatcaaaggagcaaacctgctagttgatgttagtggtgtagtcaaattagctgactttggaatggccaagcatttaagtactgcagcccccaatctttcactgaagggaacaccatactggatggccccagagatggttcaggctacacttaataaagatgtgggttatgatcttgctgttgatatctggagtcttggttgtaccattatcgagatgtttaatggaaaacctccctggagtgatcttgaagggcctgctgcaatgtttagagttttgcataaagacccaccaattcctgacaatttatctcatgagggcaaagattttctgcaattctgtttcaagaggaatccagcagagagaccaactgcaagtgagctgttggagcatccatttatccggaattcaagtcattacaacaaacatggttccatacattcatttgcggggattaaatccaatgataataataatggaaatggttcaagagacaaagcagcctcgaagagtgattcctgcgtgaaaggaaaaattactgtaggtgagccaaccaatgctaggccttccgaatcgtcagcttttcgattgactccactatcaatccaggaagttgcacctaacttctcctctagacccttaggtctaacctccaatcctagtccatcagccaatttagtgaacactgtatattttccgattgcaaactctcagcgtagtcctttgccaagacctaatgaaaaggaggctctgttctaa
More
|
|||||||
| Protein seq | MPLTLRARASWSPQASVMPTWWKRSKSAFQRSSAVSSAPASPARASTSSCAAPGRRSAAGRCADDAGGLLLARRRQLTRQRKLRHVDDIGVGLESLGLVVANSSPPPRGRASTSAAVGHPVSIPIARSASSAEFRAVHQPPPRAATAASPVLLPLPLPSPKPVESDTSEPDVGGERATRVTSQIVQNFPDNNNNLPDNSSKRTTTSSHHRKVFREKFQDKSSTETANFRLNIPAKSAPSSGFSSPVCSPRRFSNAEYTTPTAQGPQAWSAPSVRSVDSMATSSPRISPEIYTGVTEQSTFSNSLRSPILMSKNSSAPPSPLHPKLFPENNMSRIEGNGNVSFHPLPRPPGAINSMQTSIVNQSAPKVEMPSVAGQWQKGRLLGSGTFGCVYEATNRQTGALCAMKEVNIIPDDAKSAESLKQLEQEIKFLSQFKHENIVQYYGSDTFEDRFYIYLEYVHPGSINKYVKQHYGAMTESVVRNFTRHILRGLAFLHGQKIMHRDIKGANLLVDVSGVVKLADFGMAKHLSTAAPNLSLKGTPYWMAPEMVQATLNKDVGYDLAVDIWSLGCTIIEMFNGKPPWSDLEGPAAMFRVLHKDPPIPDNLSHEGKDFLQFCFKRNPAERPTASELLEHPFIRNSSHYNKHGSIHSFAGIKSNDNNNGNGSRDKAASKSDSCVKGKITVGEPTNARPSESSAFRLTPLSIQEVAPNFSSRPLGLTSNPSPSANLVNTVYFPIANSQRSPLPRPNEKEALF
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 2.521590 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0119000 | RBH | 0.205716 | 0.253160 | 0.802473 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g02780 | RBH | 0.138277 | 0.169245 | 0.205327 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0119000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0001230 | RBH | 0.000000 | 1.755276 | 0.424220 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0001240 | RBH | 0.085988 | 0.000000 | 0.906472 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0035550 | RBH | 1.513177 | 11.843328 | 11.489351 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0001180 | RBH | 0.023764 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0001190 | RBH | 0.000000 | 0.000000 | 1.958520 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0017400 | RBH | 0.3338695 | 1.85935 | 0.033813 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0001200 | RBH | 0.032360 | 0.000000 | 0.750678 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0014900 | RBH | 1.0010515 | 1.6838935 | 0.080546 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0001250 | RBH | 0.050928 | 0.162826 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0001260 | RBH | 0.061086 | 2.020114 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0001250 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0001330 | RBH | 0.000000 | 0.240421 | 0.270869 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0001240 | RBH | 0.039540 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G001260 | RBH | 0.020008 | 0.000000 | 0.118518 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0001250 | RBH | 0.452547 | 1.320319 | 2.968773 |
