Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_06g0020940 | OGI:06065490 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr06:22906754-22910648 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaaccttgctggctcccgggcttgatgagcggctgctgggagatcttcccccactcctcgggagagcacttcacctccttgaggaaggccaccacctccttcatggtgggccgctccgcgggcgccgggttcacgcagaagatggcgatccccagcgtctgcagcatctcctggaccagctggtccggcatgccgcgcagcttcgggtccaggatgttcaccgctggctcgtagctccccatcttcttcttcgcccactccacgatgtggagggagtcgcccaccaccgcctccaccgcgctccgcccgctcaggatctccaggagcaccaccccgtagctgtacacgtcgctcttctcggtgatcttcgtggtgtagccatactctgaaaatgaggaaatgtatgtcaggataaatttcttggatgttttaagcatatcaacataatcttgggccaggcatttcaacaaacagtatataagtcaacaagcttcaatggacattgatgcttgtgatttcagaaacttgtgcaatggcagttaatagatagccagactgatcggtttcacctgcttaagctacaagcaatcaactagtcatggtcatggtcatggtcatggaatcagagcaaggttaagattactagaagcaactgcaggtcaaagattctttcttagataacagcattacccaaagagtcattaacctatggcattaactgttgctggtcttgtacactacattctactactactatatttctagattttgaagaaaaaatagcatgcagataaatacttgaagtaggaatcacttgcctggagcaatgtatccataagaaccggcgatgcgtgacatagcatgatgatagttgggggagttcatcagcttggccagcccaaagtcagccaagtatgcctcatacttcgtatcaagcagtatattattgcacttgacatcgcggtggagtatcgccgggacgcaatcatggtgcagataggccagcccttgtgctgcgccgacggcgatcttgtaccgggtatcccagtccaggctcctgttatccttcaggagctgttgcagattgccattggggatgtagttgtagagcaagagcttaacatacttgtttgagcagtaaccaagcagcttgacgatgttccggtgcctgatgtgccccaatatctgaatctcagcagcgaacgcgtcgattggctcctccttcgatgtcttccacagcttcttcacggcgatgatctccccattcggcatctcagctctgtacacaacacctgagcaacctttgccgatcacattctcatctctcaggcactccaagatgttatcgacgcagaagttcagcttctggaacggcgtgaacgtccacgggtgcgagaagtcatcgccacccgcaaccgacatgctcatcgccttcttgcccgcgagtgttctgcttctgttgatcaggatccagaccacaacaagcaacagagtgattgagcccagaacagcacagacaaggatcacggtcttgacggtcttcagtgccgtcctgcgaaccatgtctgatgcacaagtgtgcccgtcgtaggactcgcagaggttgggattgttgatgtaggagctcgatgacaatgtcttgaagaacggtgtcaccgggatcgcgccggagaaattgttgtacgaaatgttgagagatgtcaagctggtgagcccactcaacactgagatgctgccatacaagccattgctggagaggtcgagcgactgcagctgcgtcaagctggacatctcatccggcagctcgccggtgaacctgttcgagctgaggtcaaggctaatgctcaggctcgagagcgcgccaatctccggcggtatcggaccggagaagctgttgttgctcagctccagcatggtcagcttctgcaggttgcgaatcgacttgggcaatgtcctggagagcatgttgccgctgaggatgagcttgttgaggtagctgaagttgccgaagctcgccggtatctcgccggtgagcttgttcatgctcaggtcaagctgctccaggttcatgagctcgccgaactgcggcgggatggcacccgtgaagctgttgttgtggacgtcgagcagctcgagcaccgtgatgttggcgagctcgccggggagcgcgccggtgaacttgttggagtagaggtccaggaacaccaggttcggcagcttgccgatctccctgggtatctcgccggcgagctggttctcgccgagccggaggcgcaccagcgacgagcagtcggcgacgctcggcgggagcctcccggagagcgcgttcccgaggaggagcagcttgctgagcttctgcagcgcgaacacctcgtcggggatgccgccggcgaggcggttcctggacaggtcgagcgcgtacagctcggtgcagttgccgagcgacggcggtatcgcgccggagagcgcgttgccccagaggaacagcacctgcagcgccctgagctcgccgagctgcggcgggatggcgccggtcaggccgttcttgtcgagctggagcgccgtgaggctgctgcagttgctcagctccgccgggatgcgccccgcgagctggttgtccgacaggtgcagctgctcgagcgcggcgaggcggccgagcgccccgggcacctcgccggcgagccggttgccggagaggtcgagcacgacgagcgccgagcagttggagagctccggcgggatcctcccggacagggcgttgccccagagcagcaggctggtgagcttttgcagccgcccgagctccggaggtatcgggccggtgagcttgttcatgtggaggtacaggttgcgcagctcggcgcagccgccgagcgcggcggggatcgggccggacacgccggtgtcgtacaatgccagcgtctggaggttggcgaggttgccgagctcctccgggatggcgccggacagcgcggtggcggcggcgccgaagacggtgaggttggagagcgcgccaagggaggccgggatggggcccgacagccccgggttgccgccgacgcggaactgctggagcgcggtgagcgcgccgagcgacgctgggatggtgccgttgaggaggttgtcctggacgcagagcacctggagcgcggcgaggctggcgagggagcgcgggatggcgccggtgaggcggttggagttgaggagcaggtactggagccccgacagcgcgccgagcgacgccgggatgtcgccgtagagcgcgttcgacgagaggtccagcacgcggagcgcggcgagcgacgcgtacgccggcgggatggcgccggagatgttgcaggtggagaggttgagcagctggagcgacgacagcgacgcgagctgcggcggcagcgacgacaggttgaggaaggtgttcggcagcgacagcgacaccacccggctctgcggcgagcacgtcaccccctgccacgagcacggcgtcgcggcggtggggtcccacgacggcagcaccggcgacggcgccgccgccggcagcagcgacagcagcgccttcccgtccgcggacagcgccgccgccggccgcaccaccacccccaacaccaccaccaccaccaccaccaccaagaaccggtcgccccggtgcgccattaccccccaaaacgatcaagaaaccacaaaaaaaaccagaccaaaaaagaagaacaaatctcccccctaatctacacctcacgacatgagagagagcttgcttgctagtgagaagattactttgagctggagttgcttaagccgcaccccagctcgcatatggagctagacgaggagatggatcgatcgatcgatcgagcgagcggaggcgttgctgctgctactgtcgccgctgctacacac
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| CDS seq | atggcgcaccggggcgaccggttcttggtggtggtggtggtggtggtggtgttgggggtggtggtgcggccggcggcggcgctgtccgcggacgggaaggcgctgctgtcgctgctgccggcggcggcgccgtcgccggtgctgccgtcgtgggaccccaccgccgcgacgccgtgctcgtggcagggggtgacgtgctcgccgcagagccgggtggtgtcgctgtcgctgccgaacaccttcctcaacctgtcgtcgctgccgccgcagctcgcgtcgctgtcgtcgctccagctgctcaacctctccacctgcaacatctccggcgccatcccgccggcgtacgcgtcgctcgccgcgctccgcgtgctggacctctcgtcgaacgcgctctacggcgacatcccggcgtcgctcggcgcgctgtcggggctccagtacctgctcctcaactccaaccgcctcaccggcgccatcccgcgctccctcgccagcctcgccgcgctccaggtgctctgcgtccaggacaacctcctcaacggcaccatcccagcgtcgctcggcgcgctcaccgcgctccagcagttccgcgtcggcggcaacccggggctgtcgggccccatcccggcctcccttggcgcgctctccaacctcaccgtcttcggcgccgccgccaccgcgctgtccggcgccatcccggaggagctcggcaacctcgccaacctccagacgctggcattgtacgacaccggcgtgtccggcccgatccccgccgcgctcggcggctgcgccgagctgcgcaacctgtacctccacatgaacaagctcaccggcccgatacctccggagctcgggcggctgcaaaagctcaccagcctgctgctctggggcaacgccctgtccgggaggatcccgccggagctctccaactgctcggcgctcgtcgtgctcgacctctccggcaaccggctcgccggcgaggtgcccggggcgctcggccgcctcgccgcgctcgagcagctgcacctgtcggacaaccagctcgcggggcgcatcccggcggagctgagcaactgcagcagcctcacggcgctccagctcgacaagaacggcctgaccggcgccatcccgccgcagctcggcgagctcagggcgctgcaggtgctgttcctctggggcaacgcgctctccggcgcgataccgccgtcgctcggcaactgcaccgagctgtacgcgctcgacctgtccaggaaccgcctcgccggcggcatccccgacgaggtgttcgcgctgcagaagctcagcaagctgctcctcctcgggaacgcgctctccgggaggctcccgccgagcgtcgccgactgctcgtcgctggtgcgcctccggctcggcgagaaccagctcgccggcgagatacccagggagatcggcaagctgccgaacctggtgttcctggacctctactccaacaagttcaccggcgcgctccccggcgagctcgccaacatcacggtgctcgagctgctcgacgtccacaacaacagcttcacgggtgccatcccgccgcagttcggcgagctcatgaacctggagcagcttgacctgagcatgaacaagctcaccggcgagataccggcgagcttcggcaacttcagctacctcaacaagctcatcctcagcggcaacatgctctccaggacattgcccaagtcgattcgcaacctgcagaagctgaccatgctggagctgagcaacaacagcttctccggtccgataccgccggagattggcgcgctctcgagcctgagcattagccttgacctcagctcgaacaggttcaccggcgagctgccggatgagatgtccagcttgacgcagctgcagtcgctcgacctctccagcaatggcttgtatggcagcatctcagtgttgagtgggctcaccagcttgacatctctcaacatttcgtacaacaatttctccggcgcgatcccggtgacaccgttcttcaagacattgtcatcgagctcctacatcaacaatcccaacctctgcgagtcctacgacgggcacacttgtgcatcagacatggttcgcaggacggcactgaagaccgtcaagaccgtgatccttgtctgtgctgttctgggctcaatcactctgttgcttgttgtggtctggatcctgatcaacagaagcagaacactcgcgggcaagaaggcgatgagcatgtcggttgcgggtggcgatgacttctcgcacccgtggacgttcacgccgttccagaagctgaacttctgcgtcgataacatcttggagtgcctgagagatgagaatgtgatcggcaaaggttgctcaggtgttgtgtacagagctgagatgccgaatggggagatcatcgcctgtacaagaccagcaacagttaatgccatagagtatggctacaccacgaagatcaccgagaagagcgacgtgtacagctacggggtggtgctcctggagatcctgagcgggcggagcgcggtggaggcggtggtgggcgactccctccacatcgtggagtgggcgaagaagaagatggggagctacgagccagcggtgaacatcctggacccgaagctgcgcggcatgccggaccagctggtccaggagatgctgcagacgctggggatcgccatcttctgcgtgaacccggcgcccgcggagcggcccaccatgaaggaggtggtggccttcctcaaggaggtgaagtgctctcccgaggagtgggggaagatctcccagcagccgctcatcaagcccgggagccagcaaggttga
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| Protein seq | MAHRGDRFLVVVVVVVVLGVVVRPAAALSADGKALLSLLPAAAPSPVLPSWDPTAATPCSWQGVTCSPQSRVVSLSLPNTFLNLSSLPPQLASLSSLQLLNLSTCNISGAIPPAYASLAALRVLDLSSNALYGDIPASLGALSGLQYLLLNSNRLTGAIPRSLASLAALQVLCVQDNLLNGTIPASLGALTALQQFRVGGNPGLSGPIPASLGALSNLTVFGAAATALSGAIPEELGNLANLQTLALYDTGVSGPIPAALGGCAELRNLYLHMNKLTGPIPPELGRLQKLTSLLLWGNALSGRIPPELSNCSALVVLDLSGNRLAGEVPGALGRLAALEQLHLSDNQLAGRIPAELSNCSSLTALQLDKNGLTGAIPPQLGELRALQVLFLWGNALSGAIPPSLGNCTELYALDLSRNRLAGGIPDEVFALQKLSKLLLLGNALSGRLPPSVADCSSLVRLRLGENQLAGEIPREIGKLPNLVFLDLYSNKFTGALPGELANITVLELLDVHNNSFTGAIPPQFGELMNLEQLDLSMNKLTGEIPASFGNFSYLNKLILSGNMLSRTLPKSIRNLQKLTMLELSNNSFSGPIPPEIGALSSLSISLDLSSNRFTGELPDEMSSLTQLQSLDLSSNGLYGSISVLSGLTSLTSLNISYNNFSGAIPVTPFFKTLSSSSYINNPNLCESYDGHTCASDMVRRTALKTVKTVILVCAVLGSITLLLVVVWILINRSRTLAGKKAMSMSVAGGDDFSHPWTFTPFQKLNFCVDNILECLRDENVIGKGCSGVVYRAEMPNGEIIACTRPATVNAIEYGYTTKITEKSDVYSYGVVLLEILSGRSAVEAVVGDSLHIVEWAKKKMGSYEPAVNILDPKLRGMPDQLVQEMLQTLGIAIFCVNPAPAERPTMKEVVAFLKEVKCSPEEWGKISQQPLIKPGSQQG |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g34110 [UniProtKB/Swiss-Prot:C0LGF5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_06g0020940 | OsCMeo_06g0020940.01 | Chr06 | 22906754 | 22910648 | - | NAM | ||
| CDS seq | atggcgcaccggggcgaccggttcttggtggtggtggtggtggtggtggtgttgggggtggtggtgcggccggcggcggcgctgtccgcggacgggaaggcgctgctgtcgctgctgccggcggcggcgccgtcgccggtgctgccgtcgtgggaccccaccgccgcgacgccgtgctcgtggcagggggtgacgtgctcgccgcagagccgggtggtgtcgctgtcgctgccgaacaccttcctcaacctgtcgtcgctgccgccgcagctcgcgtcgctgtcgtcgctccagctgctcaacctctccacctgcaacatctccggcgccatcccgccggcgtacgcgtcgctcgccgcgctccgcgtgctggacctctcgtcgaacgcgctctacggcgacatcccggcgtcgctcggcgcgctgtcggggctccagtacctgctcctcaactccaaccgcctcaccggcgccatcccgcgctccctcgccagcctcgccgcgctccaggtgctctgcgtccaggacaacctcctcaacggcaccatcccagcgtcgctcggcgcgctcaccgcgctccagcagttccgcgtcggcggcaacccggggctgtcgggccccatcccggcctcccttggcgcgctctccaacctcaccgtcttcggcgccgccgccaccgcgctgtccggcgccatcccggaggagctcggcaacctcgccaacctccagacgctggcattgtacgacaccggcgtgtccggcccgatccccgccgcgctcggcggctgcgccgagctgcgcaacctgtacctccacatgaacaagctcaccggcccgatacctccggagctcgggcggctgcaaaagctcaccagcctgctgctctggggcaacgccctgtccgggaggatcccgccggagctctccaactgctcggcgctcgtcgtgctcgacctctccggcaaccggctcgccggcgaggtgcccggggcgctcggccgcctcgccgcgctcgagcagctgcacctgtcggacaaccagctcgcggggcgcatcccggcggagctgagcaactgcagcagcctcacggcgctccagctcgacaagaacggcctgaccggcgccatcccgccgcagctcggcgagctcagggcgctgcaggtgctgttcctctggggcaacgcgctctccggcgcgataccgccgtcgctcggcaactgcaccgagctgtacgcgctcgacctgtccaggaaccgcctcgccggcggcatccccgacgaggtgttcgcgctgcagaagctcagcaagctgctcctcctcgggaacgcgctctccgggaggctcccgccgagcgtcgccgactgctcgtcgctggtgcgcctccggctcggcgagaaccagctcgccggcgagatacccagggagatcggcaagctgccgaacctggtgttcctggacctctactccaacaagttcaccggcgcgctccccggcgagctcgccaacatcacggtgctcgagctgctcgacgtccacaacaacagcttcacgggtgccatcccgccgcagttcggcgagctcatgaacctggagcagcttgacctgagcatgaacaagctcaccggcgagataccggcgagcttcggcaacttcagctacctcaacaagctcatcctcagcggcaacatgctctccaggacattgcccaagtcgattcgcaacctgcagaagctgaccatgctggagctgagcaacaacagcttctccggtccgataccgccggagattggcgcgctctcgagcctgagcattagccttgacctcagctcgaacaggttcaccggcgagctgccggatgagatgtccagcttgacgcagctgcagtcgctcgacctctccagcaatggcttgtatggcagcatctcagtgttgagtgggctcaccagcttgacatctctcaacatttcgtacaacaatttctccggcgcgatcccggtgacaccgttcttcaagacattgtcatcgagctcctacatcaacaatcccaacctctgcgagtcctacgacgggcacacttgtgcatcagacatggttcgcaggacggcactgaagaccgtcaagaccgtgatccttgtctgtgctgttctgggctcaatcactctgttgcttgttgtggtctggatcctgatcaacagaagcagaacactcgcgggcaagaaggcgatgagcatgtcggttgcgggtggcgatgacttctcgcacccgtggacgttcacgccgttccagaagctgaacttctgcgtcgataacatcttggagtgcctgagagatgagaatgtgatcggcaaaggttgctcaggtgttgtgtacagagctgagatgccgaatggggagatcatcgcctgtacaagaccagcaacagttaatgccatagagtatggctacaccacgaagatcaccgagaagagcgacgtgtacagctacggggtggtgctcctggagatcctgagcgggcggagcgcggtggaggcggtggtgggcgactccctccacatcgtggagtgggcgaagaagaagatggggagctacgagccagcggtgaacatcctggacccgaagctgcgcggcatgccggaccagctggtccaggagatgctgcagacgctggggatcgccatcttctgcgtgaacccggcgcccgcggagcggcccaccatgaaggaggtggtggccttcctcaaggaggtgaagtgctctcccgaggagtgggggaagatctcccagcagccgctcatcaagcccgggagccagcaaggttga
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| Protein seq | MAHRGDRFLVVVVVVVVLGVVVRPAAALSADGKALLSLLPAAAPSPVLPSWDPTAATPCSWQGVTCSPQSRVVSLSLPNTFLNLSSLPPQLASLSSLQLLNLSTCNISGAIPPAYASLAALRVLDLSSNALYGDIPASLGALSGLQYLLLNSNRLTGAIPRSLASLAALQVLCVQDNLLNGTIPASLGALTALQQFRVGGNPGLSGPIPASLGALSNLTVFGAAATALSGAIPEELGNLANLQTLALYDTGVSGPIPAALGGCAELRNLYLHMNKLTGPIPPELGRLQKLTSLLLWGNALSGRIPPELSNCSALVVLDLSGNRLAGEVPGALGRLAALEQLHLSDNQLAGRIPAELSNCSSLTALQLDKNGLTGAIPPQLGELRALQVLFLWGNALSGAIPPSLGNCTELYALDLSRNRLAGGIPDEVFALQKLSKLLLLGNALSGRLPPSVADCSSLVRLRLGENQLAGEIPREIGKLPNLVFLDLYSNKFTGALPGELANITVLELLDVHNNSFTGAIPPQFGELMNLEQLDLSMNKLTGEIPASFGNFSYLNKLILSGNMLSRTLPKSIRNLQKLTMLELSNNSFSGPIPPEIGALSSLSISLDLSSNRFTGELPDEMSSLTQLQSLDLSSNGLYGSISVLSGLTSLTSLNISYNNFSGAIPVTPFFKTLSSSSYINNPNLCESYDGHTCASDMVRRTALKTVKTVILVCAVLGSITLLLVVVWILINRSRTLAGKKAMSMSVAGGDDFSHPWTFTPFQKLNFCVDNILECLRDENVIGKGCSGVVYRAEMPNGEIIACTRPATVNAIEYGYTTKITEKSDVYSYGVVLLEILSGRSAVEAVVGDSLHIVEWAKKKMGSYEPAVNILDPKLRGMPDQLVQEMLQTLGIAIFCVNPAPAERPTMKEVVAFLKEVKCSPEEWGKISQQPLIKPGSQQG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.391521 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0589800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g38990 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0589800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0011180 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0011090 | RBH | 0.0 | 0.0 | 1.222288 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0020730 | SBH | 0.119523 | 0.974873 | 2.135322 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0020660 | RBH | 0.0 | 0.144824 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0021100 | RBH | 0.0 | 7.147120 | 0.119797 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0366000 | SBH | 0.3113895 | 0.4256115 | 0.166195 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0020540 | RBH | 0.0 | 0.125206 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0344600 | RBH | 0.2737175 | 3.61329 | 2.598388 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0020940 | RBH | 0.0 | 0.595795 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0020960 | RBH | 0.0 | 10.873197 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0020580 | RBH | 0.0 | 18.138052 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0021300 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0020810 | RBH | 0.0 | 3.377038 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G020660 | RBH | 0.0 | 2.926954 | 0.115848 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0011190 | RBH | 0.000000 | 5.689448 | 1.144959 |
