Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_06g0006390 | OGI:06013450 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr06:4729812-4732394 | ||||||||
| Gene Symbol | ERF71, OsERF#071, OsERF071, OsERF71, AP2/EREBP#124, AP2/EREBP124, OsERF15 | ||||||||||
| DNA seq | actctctgtaaaaacaagcaaacaaagaaagaaaagcatcacaaatctcacgcactgtctctcgttcgcgcaaagcgcgctgcttttctccgctttgcgagcaccatagcctagcccaccatgtgcggcggcgccatcctctccgacctcatcccgccgccgcggcgggtcaccgccggcgacctctggctggagaagaccaagaagcagcagcagcagaagaagaagaacaagggcacgaggaggctgccactgcgccaagaggaggaggatgatttcgaggccgacttcgaggagttcgaggtggattccggcgagtgggaggtggagtccgacgccgacgaggccaagccgctcgccgcgccccggagcggcttcgctaaaggtaaaacaagaacgcgagatttgggagataaaagcgagctgtttcttgattttggttggcccagattttttttttttgcttgcggtcagtggggagattagtaggtgaggagaaggatgccttttttttttctattgttctgtaggaaatttaatgtctgcaaatctgaaaattccacctaattattgttgcagttagtgcttacttatcatgctaggttgctgctgccgggttagctttattaccttattgattaatcttaaggaatattattatatctcagttttagaaatcagggcctatgttatgatgaatcatcatgtcctgtgatggctcctacgattcatggatggagcttccatacaacacaatttggagaagaagtttctgagagtttgcccagattggatcagatctatgttttttcgtgttaattactgtactcaagtaatcccgtatgaagaatcttggatccgacactgggcgtatagaatcttgacatttctgaacaaagttaggactcaagcagatccatgttctgaagaaatatctgtttttttttctataccatgtgattggactgaacatgtacagtattttcttcactgtttttaatatattctcttctgttttcttttcttaatgcttattggccagcagttcttatgttaaagtgttcgattctcaatgcttctttgtgtatgctactgattcaaaaggttgaaggataataagtttttaccatattaaaatttatacaccgatcttgttccttgcttcaggtggattgaaaaacactactgttgctggtgctgatgggcctgcagcaaggtctgctaaaaggaagagaaagaaccaattcaggggtatccgccagcggccatggggcaaatgggctgcggaaatcagagatcctcgcaaaggtgtccgcgtctggcttggcaccttcaactctcctgaggaagctgccagagcttatgatgctgaagcacgaaggattcgaggcaagaaggccaaggtcaatttcccagatggggctccagtggcttctcagaggagtcatgctgagccctcctccatgaacatgcctgctttcagcatcgaagagaagccggccgtcatgtcagcaggcaacaaaaccatgtacaacacaaatgcttatgcctaccctgctgttgagtacaccttacaggagccatttgtgcagattcagaatgtctcatttgttcctgcaatgaacgcgattgaggatactttcatgaacctgtcctctgatcaagggagcaactcctttggttgctcggactttagccaggagaatgatatcaagacccctgacataacttccatgcttgcaccgaccatgacaggtgttgatgactccgcattcctccagaacaatgccagtgatgcaatggtacctcctgtgatggggaatgctagcattgatcttgccgacctggagccgtacatgaaatttctgatcgatggtggttcggatgagtcgattgacacccttctgagctctgatggatctcaggatgtggccagtagcatggacctttggagcttcgatgacatgcccgtgtcggccgagttctactgaggggtttggggtgtagcaactggtgcctgtatatataaggacaaatggtaagcatcagcaatgtgaaaacggctaactctttgtgacatttcgatctccatttctctgatctttctccgcctctcgtttcaggaataaacattctggacatccaagaagcggcatgtgtctgtcgggcgcctctagttgcgctatatagctatgttagtatgttagtatgtgctgtgtctagcttagatgctgaagtctcaagtactatttggcagtgaaactatctatctgtaactgctatatgaggctggaacaagttacttagcttctaccttatctgtacttgctatagtggctgtgaaccttgtggatctgaactctgaagccaatgtttactatataatgtggttggttttataaactctagttgatttggacccctgtcaatggtcatgctatggctggggataagaaccattgatgatcatatttgactagaaacgctgcttccaaaatatcccataaagtaaagctgaacttgtactaatgttcttgcacaagttgcaataatgttgccttatggaaaaacagtttccggacc
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| CDS seq | atgtgcggcggcgccatcctctccgacctcatcccgccgccgcggcgggtcaccgccggcgacctctggctggagaagaccaagaagcagcagcagcagaagaagaagaacaagggcacgaggaggctgccactgcgccaagaggaggaggatgatttcgaggccgacttcgaggagttcgaggtggattccggcgagtgggaggtggagtccgacgccgacgaggccaagccgctcgccgcgccccggagcggcttcgctaaaggtggattgaaaaacactactgttgctggtgctgatgggcctgcagcaaggtctgctaaaaggaagagaaagaaccaattcaggggtatccgccagcggccatggggcaaatgggctgcggaaatcagagatcctcgcaaaggtgtccgcgtctggcttggcaccttcaactctcctgaggaagctgccagagcttatgatgctgaagcacgaaggattcgaggcaagaaggccaaggtcaatttcccagatggggctccagtggcttctcagaggagtcatgctgagccctcctccatgaacatgcctgctttcagcatcgaagagaagccggccgtcatgtcagcaggcaacaaaaccatgtacaacacaaatgcttatgcctaccctgctgttgagtacaccttacaggagccatttgtgcagattcagaatgtctcatttgttcctgcaatgaacgcgattgaggatactttcatgaacctgtcctctgatcaagggagcaactcctttggttgctcggactttagccaggagaatgatatcaagacccctgacataacttccatgcttgcaccgaccatgacaggtgttgatgactccgcattcctccagaacaatgccagtgatgcaatggtacctcctgtgatggggaatgctagcattgatcttgccgacctggagccgtacatgaaatttctgatcgatggtggttcggatgagtcgattgacacccttctgagctctgatggatctcaggatgtggccagtagcatggacctttggagcttcgatgacatgcccgtgtcggccgagttctactga
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| Protein seq | MCGGAILSDLIPPPRRVTAGDLWLEKTKKQQQQKKKNKGTRRLPLRQEEEDDFEADFEEFEVDSGEWEVESDADEAKPLAAPRSGFAKGGLKNTTVAGADGPAARSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGKKAKVNFPDGAPVASQRSHAEPSSMNMPAFSIEEKPAVMSAGNKTMYNTNAYAYPAVEYTLQEPFVQIQNVSFVPAMNAIEDTFMNLSSDQGSNSFGCSDFSQENDIKTPDITSMLAPTMTGVDDSAFLQNNASDAMVPPVMGNASIDLADLEPYMKFLIDGGSDESIDTLLSSDGSQDVASSMDLWSFDDMPVSAEFY |
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| Function | Ethylene-responsive transcription factor 1 [UniProtKB/Swiss-Prot:Q6K7E6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_06g0006390 | OsCMeo_06g0006390.01 | Chr06 | 4729812 | 4732394 | + | NAM | ||
| CDS seq | atgtgcggcggcgccatcctctccgacctcatcccgccgccgcggcgggtcaccgccggcgacctctggctggagaagaccaagaagcagcagcagcagaagaagaagaacaagggcacgaggaggctgccactgcgccaagaggaggaggatgatttcgaggccgacttcgaggagttcgaggtggattccggcgagtgggaggtggagtccgacgccgacgaggccaagccgctcgccgcgccccggagcggcttcgctaaaggtggattgaaaaacactactgttgctggtgctgatgggcctgcagcaaggtctgctaaaaggaagagaaagaaccaattcaggggtatccgccagcggccatggggcaaatgggctgcggaaatcagagatcctcgcaaaggtgtccgcgtctggcttggcaccttcaactctcctgaggaagctgccagagcttatgatgctgaagcacgaaggattcgaggcaagaaggccaaggtcaatttcccagatggggctccagtggcttctcagaggagtcatgctgagccctcctccatgaacatgcctgctttcagcatcgaagagaagccggccgtcatgtcagcaggcaacaaaaccatgtacaacacaaatgcttatgcctaccctgctgttgagtacaccttacaggagccatttgtgcagattcagaatgtctcatttgttcctgcaatgaacgcgattgaggatactttcatgaacctgtcctctgatcaagggagcaactcctttggttgctcggactttagccaggagaatgatatcaagacccctgacataacttccatgcttgcaccgaccatgacaggtgttgatgactccgcattcctccagaacaatgccagtgatgcaatggtacctcctgtgatggggaatgctagcattgatcttgccgacctggagccgtacatgaaatttctgatcgatggtggttcggatgagtcgattgacacccttctgagctctgatggatctcaggatgtggccagtagcatggacctttggagcttcgatgacatgcccgtgtcggccgagttctactga
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| Protein seq | MCGGAILSDLIPPPRRVTAGDLWLEKTKKQQQQKKKNKGTRRLPLRQEEEDDFEADFEEFEVDSGEWEVESDADEAKPLAAPRSGFAKGGLKNTTVAGADGPAARSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGKKAKVNFPDGAPVASQRSHAEPSSMNMPAFSIEEKPAVMSAGNKTMYNTNAYAYPAVEYTLQEPFVQIQNVSFVPAMNAIEDTFMNLSSDQGSNSFGCSDFSQENDIKTPDITSMLAPTMTGVDDSAFLQNNASDAMVPPVMGNASIDLADLEPYMKFLIDGGSDESIDTLLSSDGSQDVASSMDLWSFDDMPVSAEFY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.390370 | 142.402252 | 110.904106 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0194000 | RBH | 9.989944 | 9.381405 | 41.169304 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g09390 | RBH | 6.586107 | 6.123916 | 10.265025 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0194000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0006570 | RBH | 3.236494 | 188.371017 | 51.316250 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0006400 | RBH | 4.330418 | 25.059437 | 35.571957 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0036030 | RBH | 3.555151 | 90.065979 | 49.020725 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0006520 | RBH | 0.964855 | 2.721131 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0006390 | RBH | 28.202318 | 62.874046 | 161.158401 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0079700 | RBH | 81.9007225 | 130.9763795 | 302.991104 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0006260 | RBH | 1.643989 | 4.633047 | 14.187221 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0079700 | RBH | 85.725964 | 149.927452 | 182.545929 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0006620 | RBH | 2.642697 | 1.185229 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0006490 | RBH | 4.295982 | 37.971260 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0006500 | RBH | 25.035109 | 78.460266 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0006540 | RBH | 6.298873 | 4.729098 | 23.032061 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0006400 | RBH | 1.394575 | 39.263119 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G006230 | RBH | 4.353655 | 21.367638 | 37.147663 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0006510 | RBH | 7.251100 | 122.631844 | 88.889824 |
