Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_05g0023430 | OGI:05069130 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr05:26103316-26104949 | ||||||||
| Gene Symbol | NAC89, ONAC089, ONAC89 | ||||||||||
| DNA seq | tcatccttctgcatttgtgcattgtcccccgtcttcttgcgatggcctctgctcctcctcgtacacgttcagcggcattggcgcctggacctcgccgccgtgcgtcgtcgccggcagcagctgcattggcgcctggagctcgccgccgtgcaccatcgccggctggtcattgttcatcatcggcggcagctgcattggcgcttgcggctggtagttgttcatcatcaccggtagctgctgcatcggcggtggcgggtcgtcgaacggatcgaacacccaatcgtcaaacggcagctgctgcatcggcgcttgggcgatgtgcaccggcgtccactgcgcctggtgcatgtgcatcggcgcgtggccgccgacgtgatgcaccggtcgccgctgcggtggcgcttggccgacgagcaccggtcgccgctgcaccggccgcggctggaagctgtgcgccggcgacggcatgcagttgtgctgcatcgtcggccaccgcatctgcgcgcggttgttgtgcaccgggaatccttgctgaaatggcgcgtggccgcagaacgtcgtcggcggaggcgggaagttgtgcatgagtgatagcccctgcattgggacttggcggttgcccatcgcttgcgatggcccgccgtcacatggcgtcgacggtgatggtggcagccacggccgcttcgacggctgctcggccaccgccgccgccgccacgggcctcttgcccgcctgtttcgccgaccgcatgtctccctccgccgccgccgcatccgcattgtcgctgccctccgccgtctcgggacccaagtcgaagacagcgcaggcttccgcccactcgtcgatgtcctcgccgccgccgccgccgccgcggacgacttcggcttgctcgccgtcgtctgcgcctttcttcggcgacgtgtaaatcctgcacaacacgtactgatccagctgccgctgcaagaacaagctcgatttgagctacagcgattaacccaaaaaaaaaaacaagaacacaagaggcggctgacctggttgctgctgccgccggcggcggcggtcttgtcgagcttgttctcgaagtgcgggatggtgaactcgcgcatcagccacttggtcttcttctccgtcttgacggggcccttgaagtagacgaggctggtgacgcagaacttgacccagccatagcactccgtgatcgggtccttcccctccgtcttccccgtcgacgccttccaccgcccggccttgtcctccgtgctccgcgacggccgcttcccgttcctgtacttgcgatccctcggcgacaggaagtaccacccctcctcgccctcgccggcgacgccgccgttgcacttctctgcacgccattgatccgatcaagatcaccaagaaacaagaacaactcgatcaaagaagaagaagaggagcgcaccattgatgagccgctccggctcgaactcgtagacgttctccacgacgatggcggggttgggcacgggcggccggccctgcagccgggggagaaggtagtactccacggcctccgcctccctcggcttgaacctgaaccccatctcccctccgccgccgccaccgccgccgctactctccccctttcctaatcccgccat
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| CDS seq | atggcgggattaggaaagggggagagtagcggcggcggtggcggcggcggaggggagatggggttcaggttcaagccgagggaggcggaggccgtggagtactaccttctcccccggctgcagggccggccgcccgtgcccaaccccgccatcgtcgtggagaacgtctacgagttcgagccggagcggctcatcaatgagaagtgcaacggcggcgtcgccggcgagggcgaggaggggtggtacttcctgtcgccgagggatcgcaagtacaggaacgggaagcggccgtcgcggagcacggaggacaaggccgggcggtggaaggcgtcgacggggaagacggaggggaaggacccgatcacggagtgctatggctgggtcaagttctgcgtcaccagcctcgtctacttcaagggccccgtcaagacggagaagaagaccaagtggctgatgcgcgagttcaccatcccgcacttcgagaacaagctcgacaagaccgccgccgccggcggcagcagcaaccagcggcagctggatcagtacgtgttgtgcaggatttacacgtcgccgaagaaaggcgcagacgacggcgagcaagccgaagtcgtccgcggcggcggcggcggcggcgaggacatcgacgagtgggcggaagcctgcgctgtcttcgacttgggtcccgagacggcggagggcagcgacaatgcggatgcggcggcggcggagggagacatgcggtcggcgaaacaggcgggcaagaggcccgtggcggcggcggcggtggccgagcagccgtcgaagcggccgtggctgccaccatcaccgtcgacgccatgtgacggcgggccatcgcaagcgatgggcaaccgccaagtcccaatgcaggggctatcactcatgcacaacttcccgcctccgccgacgacgttctgcggccacgcgccatttcagcaaggattcccggtgcacaacaaccgcgcgcagatgcggtggccgacgatgcagcacaactgcatgccgtcgccggcgcacagcttccagccgcggccggtgcagcggcgaccggtgctcgtcggccaagcgccaccgcagcggcgaccggtgcatcacgtcggcggccacgcgccgatgcacatgcaccaggcgcagtggacgccggtgcacatcgcccaagcgccgatgcagcagctgccgtttgacgattgggtgttcgatccgttcgacgacccgccaccgccgatgcagcagctaccggtgatgatgaacaactaccagccgcaagcgccaatgcagctgccgccgatgatgaacaatgaccagccggcgatggtgcacggcggcgagctccaggcgccaatgcagctgctgccggcgacgacgcacggcggcgaggtccaggcgccaatgccgctgaacgtgtacgaggaggagcagaggccatcgcaagaagacgggggacaatgcacaaatgcagaaggatga
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| Protein seq | MAGLGKGESSGGGGGGGGEMGFRFKPREAEAVEYYLLPRLQGRPPVPNPAIVVENVYEFEPERLINEKCNGGVAGEGEEGWYFLSPRDRKYRNGKRPSRSTEDKAGRWKASTGKTEGKDPITECYGWVKFCVTSLVYFKGPVKTEKKTKWLMREFTIPHFENKLDKTAAAGGSSNQRQLDQYVLCRIYTSPKKGADDGEQAEVVRGGGGGGEDIDEWAEACAVFDLGPETAEGSDNADAAAAEGDMRSAKQAGKRPVAAAAVAEQPSKRPWLPPSPSTPCDGGPSQAMGNRQVPMQGLSLMHNFPPPPTTFCGHAPFQQGFPVHNNRAQMRWPTMQHNCMPSPAHSFQPRPVQRRPVLVGQAPPQRRPVHHVGGHAPMHMHQAQWTPVHIAQAPMQQLPFDDWVFDPFDDPPPPMQQLPVMMNNYQPQAPMQLPPMMNNDQPAMVHGGELQAPMQLLPATTHGGEVQAPMPLNVYEEEQRPSQEDGGQCTNAEG |
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| Function | NAC domain-containing protein 71 [UniProtKB/Swiss-Prot:Q53NF7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_05g0023430 | OsCMeo_05g0023430.01 | Chr05 | 26103316 | 26104949 | - | NAM | ||
| CDS seq | atggcgggattaggaaagggggagagtagcggcggcggtggcggcggcggaggggagatggggttcaggttcaagccgagggaggcggaggccgtggagtactaccttctcccccggctgcagggccggccgcccgtgcccaaccccgccatcgtcgtggagaacgtctacgagttcgagccggagcggctcatcaatgagaagtgcaacggcggcgtcgccggcgagggcgaggaggggtggtacttcctgtcgccgagggatcgcaagtacaggaacgggaagcggccgtcgcggagcacggaggacaaggccgggcggtggaaggcgtcgacggggaagacggaggggaaggacccgatcacggagtgctatggctgggtcaagttctgcgtcaccagcctcgtctacttcaagggccccgtcaagacggagaagaagaccaagtggctgatgcgcgagttcaccatcccgcacttcgagaacaagctcgacaagaccgccgccgccggcggcagcagcaaccagcggcagctggatcagtacgtgttgtgcaggatttacacgtcgccgaagaaaggcgcagacgacggcgagcaagccgaagtcgtccgcggcggcggcggcggcggcgaggacatcgacgagtgggcggaagcctgcgctgtcttcgacttgggtcccgagacggcggagggcagcgacaatgcggatgcggcggcggcggagggagacatgcggtcggcgaaacaggcgggcaagaggcccgtggcggcggcggcggtggccgagcagccgtcgaagcggccgtggctgccaccatcaccgtcgacgccatgtgacggcgggccatcgcaagcgatgggcaaccgccaagtcccaatgcaggggctatcactcatgcacaacttcccgcctccgccgacgacgttctgcggccacgcgccatttcagcaaggattcccggtgcacaacaaccgcgcgcagatgcggtggccgacgatgcagcacaactgcatgccgtcgccggcgcacagcttccagccgcggccggtgcagcggcgaccggtgctcgtcggccaagcgccaccgcagcggcgaccggtgcatcacgtcggcggccacgcgccgatgcacatgcaccaggcgcagtggacgccggtgcacatcgcccaagcgccgatgcagcagctgccgtttgacgattgggtgttcgatccgttcgacgacccgccaccgccgatgcagcagctaccggtgatgatgaacaactaccagccgcaagcgccaatgcagctgccgccgatgatgaacaatgaccagccggcgatggtgcacggcggcgagctccaggcgccaatgcagctgctgccggcgacgacgcacggcggcgaggtccaggcgccaatgccgctgaacgtgtacgaggaggagcagaggccatcgcaagaagacgggggacaatgcacaaatgcagaaggatga
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| Protein seq | MAGLGKGESSGGGGGGGGEMGFRFKPREAEAVEYYLLPRLQGRPPVPNPAIVVENVYEFEPERLINEKCNGGVAGEGEEGWYFLSPRDRKYRNGKRPSRSTEDKAGRWKASTGKTEGKDPITECYGWVKFCVTSLVYFKGPVKTEKKTKWLMREFTIPHFENKLDKTAAAGGSSNQRQLDQYVLCRIYTSPKKGADDGEQAEVVRGGGGGGEDIDEWAEACAVFDLGPETAEGSDNADAAAAEGDMRSAKQAGKRPVAAAAVAEQPSKRPWLPPSPSTPCDGGPSQAMGNRQVPMQGLSLMHNFPPPPTTFCGHAPFQQGFPVHNNRAQMRWPTMQHNCMPSPAHSFQPRPVQRRPVLVGQAPPQRRPVHHVGGHAPMHMHQAQWTPVHIAQAPMQQLPFDDWVFDPFDDPPPPMQQLPVMMNNYQPQAPMQLPPMMNNDQPAMVHGGELQAPMQLLPATTHGGEVQAPMPLNVYEEEQRPSQEDGGQCTNAEG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0415400 | SBH | 0.0 | 0.0 | 2.233220 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g43960 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0442700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0023580 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0023480 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0023410 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0023510 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0396200 | RBH | 0 | 0.082207 | 0.014432 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0023090 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0406700 | RBH | 0.014543 | 0.052498 | 0.042422 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0023260 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0023170 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0023340 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0023360 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0023370 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G022830 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0023210 | RBH | 0.0 | 0.0 | 0.000000 |
