Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsCMeo_04g0029650 OGI:04098190 | 16/16 CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) Chr04:33273597-33277251
Gene Symbol SDRLK-55
DNA seq

ttaaaaaagctataaaaatgactataaagAaaaaaaaaagtaatttgaaaaaaacagaatgcaaaaacaaaaaaatgatacatatcgcttcgggagaatcaacgtaaaaaaataacgggaaattgaaaagattcacgtaaaaaggagaaaaaaggaaattaagaacagaaaaacgtagcgacacaacctctcacgcatcgccacgtatcttcgatcctccccagcctgacccgttcacgaggatgagcggaagcgaacgttcgctcattagtcatccttcatcaattttacataattaatcttttttaattttttttactattaatagtcaaagttgaaaatgtttgacttccaaaaaaaaagaaaatgcttatattttgggacggagggagtaatcattagacacaaaggaaattattttaaaaaagttaaacgtaatattaaaaatccttcgaaactcactctaagaaatttcaaaagaatttaagagactcatcccttctttccaaaggaacacatgaattctttccatatagtaatctaatcattcaatattcccccaaaatttggtactttcaaagaagctctacatgcataaaatttggtacttttaaagaagctctacatgcatagccttactggtggctatagccttgaacgatcaatacggtgctatgtatcatcaacatacaataagacctaacatagcattattgtgagttttagacgggttccactgaagtgtattagcttgcccaatatgtatatggctagaggggtattacggtagaccatgaacctcataggattagctactgggagagagagagagtaccaccatcatggaaaagaagaattttatagcctttaagaaaatatcctaaggtagtttacactataaaatatggtgcctctgttagcttttcaaggatggaaaaattgcccatttccgaataagtataatgtgcatggcctaacaagaaaaacaattcaagtcttcaacacggcagacgcaattgatgcccccaacgtcgccaacgagactcacgactgctgcatttgctgctagctcatgagtggcgtagagatgatgttctatcgtgtccaacgagatgagcttatgaacaaccgtgctcatgctcggccgcctgctaggctcaccgtccacgcacgaaaccgccagctccagcaacccggctgcctgcacatggttgaagtcaccgcgcagccgcgcgtccacgagctcctccagccacgccggcagctcgccgtcgtcgcacttcagcttctccttgagccacacggccagtcgctggacattccatgccccgtcggccgtcgccgcagccgctacccagtcgcacaccctctgccccctgaccagctcgaggagcacgacgccgaagctgtacacgtcggctttgccgttgatcgagcgaccaactgtccagcactctggcgtaatgtagcccctggtcccctgcacccgcgacagcgccatgtggctgccggcgtcgcggctcagcagcttgacgaggccgaagtccgtcaccttgggctcgaagtcgccgtcgagcaggatgttctccggcttcacgtcgcagtgcacgatccactccaggcactcgtggtggaggtacgccagcgccttcgcgacgcccacggctatcttgtacctcgaccgccatggtaacaccaccccggtgttgtcctcgccgtcgtcgccgtcgaagagggccctgtcgagagagccgttctcgacgaactcggagacgaggaggcggtgcgggtgttcggagcagaagccccatatcctgacgaggttcatgtggttgatccgcccgattacgctcagctccgaccggaacacctcgtcggcctgcgtcatctcgtccagccgcttcacggcgatgctccggccatcctcaagaacacccttgtacacggatcccgtcccgcccttagcaatctcgtctctgaatccgcacgtcgcgtctgatagctcgtcgtaggtgaacctccggaaatggctaaacaccaagctgtacccttcatcaccgacccgtcctgccgccacggagtcagctcgaaagacaaacaggtaacccacgacgacaaaaatggcctccacgacgaacacaaccgcgaggaagctgtagaagtagatgaagtttatcgtgttgcgcctgccatgaaggtacgagctgctgaccgtagcgtcccgttcgtccatggtgcaggtgtggccatcgaagtgcagcaaggacgggttcaggttcttggcacccgtagggaacttgaggtagatggtttggtacggaatgctcataacccggccgttccagagagagatcttggggtagcactcaccggtgccctgccggtaaccgaacgcctcgcagcggcagtcgacgaggcagagacgccggcacgtgtcaaacgagatcccggcggtgtagttgaggtcgaagccccagtagtcggtgtgccgcatctcggcgaacgcgacgtcctcgccgcacctgacgtcgaacgtgcgccggcatcccttgctccagtcgctcgcgtcgtgaggcacatagccgtcggggcaggagcacgtcgggccttggctgtacgtgcatatgccgtagcggccgcacaaaccgtgcacgtcgcactgcctctggaccgcgacccacgtgacgtgccagcgcccggcggcggcgtcgaggctgtagaggcggaggttgccgtcgtagtcgagcgtgagccgcctcatgacgcctccgtcgcccatgtcggaggcgttgaactgcagctggtcgctcgccgtgaagacgccgcggcggtcgaagctgccgtggcggctgctgttgaacgccgtccggttgttgtcccaccacttcttgaaggggtccggccagtagttgctgctgatctccggtccgtcgtacatcaggttgaggatgttgctgctgtcgaagtagaacttgtagtagccggagtacggggagcccctcgcctcggcggacacgagctgcctgtaccgcgtcacgggctgctccggcaggagcgtgtccgtgggccagtcgaagctctgccacagccggttgccggcggcgtcggagacgacgaggttgccggtgtcgaggagctgggcgcggtcggccggcgtgccgctggtgttggtgctccacacgacgcggccgtcgtagtcctgcagcaccagcgagccgtccttgcggagctcggcgcgcgagccgacgccgttcacgggggtgtcgcggttggccgtccacgcgacggtggcgtcggcggacgcggtgaaccagacggcgagcgtgtaggcgttggtcgccaccttgtagaagccgcacgagaagttgccgctcggcgacacgaggacgctgtcggcggcgtcctccacggcgatggagccgccgcgccacagaacgctgcggcgatcgccctcgcccgccgaaagagcaacgcaacacagggaggtgagtacgatcaagtgcaagccatggactcgattcatcgtgtatcctaaccccacagggctggaggcgtgagttccaacttccaacttaaaaactggtttaaaaggggaaagaatgtggctagcctgctgacagtgacatttcccaattgagatagtgtgtaccgtcat

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CDS seq

atgacggtacacactatctcaattgggaaatgtcactgtcagcaggctagccacattctttccccttttaaaccagtttttaagttggaagttggaactcacgcctccagccctgtggggttaggatacacgatgaatcgagtccatggcttgcacttgatcgtactcacctccctgtgttgcgttgctctttcggcgggcgagggcgatcgccgcagcgttctgtggcgcggcggctccatcgccgtggaggacgccgccgacagcgtcctcgtgtcgccgagcggcaacttctcgtgcggcttctacaaggtggcgaccaacgcctacacgctcgccgtctggttcaccgcgtccgccgacgccaccgtcgcgtggacggccaaccgcgacacccccgtgaacggcgtcggctcgcgcgccgagctccgcaaggacggctcgctggtgctgcaggactacgacggccgcgtcgtgtggagcaccaacaccagcggcacgccggccgaccgcgcccagctcctcgacaccggcaacctcgtcgtctccgacgccgccggcaaccggctgtggcagagcttcgactggcccacggacacgctcctgccggagcagcccgtgacgcggtacaggcagctcgtgtccgccgaggcgaggggctccccgtactccggctactacaagttctacttcgacagcagcaacatcctcaacctgatgtacgacggaccggagatcagcagcaactactggccggaccccttcaagaagtggtgggacaacaaccggacggcgttcaacagcagccgccacggcagcttcgaccgccgcggcgtcttcacggcgagcgaccagctgcagttcaacgcctccgacatgggcgacggaggcgtcatgaggcggctcacgctcgactacgacggcaacctccgcctctacagcctcgacgccgccgccgggcgctggcacgtcacgtgggtcgcggtccagaggcagtgcgacgtgcacggtttgtgcggccgctacggcatatgcacgtacagccaaggcccgacgtgctcctgccccgacggctatgtgcctcacgacgcgagcgactggagcaagggatgccggcgcacgttcgacgtcaggtgcggcgaggacgtcgcgttcgccgagatgcggcacaccgactactggggcttcgacctcaactacaccgccgggatctcgtttgacacgtgccggcgtctctgcctcgtcgactgccgctgcgaggcgttcggttaccggcagggcaccggtgagtgctaccccaagatctctctctggaacggccgggttatgagcattccgtaccaaaccatctacctcaagttccctacgggtgccaagaacctgaacccgtccttgctgcacttcgatggccacacctgcaccatggacgaacgggacgctacggtcagcagctcgtaccttcatggcaggcgcaacacgataaacttcatctacttctacagcttcctcgcggttgtgttcgtcgtggaggccatttttgtcgtcgtgggttacctgtttgtctttcgagctgactccgtggcggcaggacgggtcggtgatgaagggtacagcttggtgtttagccatttccggaggttcacctacgacgagctatcagacgcgacgtgcggattcagagacgagattgctaagggcgggacgggatccgtgtacaagggtgttcttgaggatggccggagcatcgccgtgaagcggctggacgagatgacgcaggccgacgaggtgttccggtcggagctgagcgtaatcgggcggatcaaccacatgaacctcgtcaggatatggggcttctgctccgaacacccgcaccgcctcctcgtctccgagggctacattacgccagagtgctggacagttggtcgctcgatcaacggcaaagccgacgtgtacagcttcggcgtcgtgctcctcgagctggtcagggggcagagggtgtgcgactgggtagcggctgcggcgacggccgacggggcatggaatgtccagcgactggccgtgtggctcaaggagaagctgaagtgcgacgacggcgagctgccggcgtggctggaggagctcgtggacgcgcggctgcgcggtgacttcaaccatgtgcaggcagccgggttgctggagctggcggtttcgtgcgtggacggtgagcctagcaggcggccgagcatgagcacggttgttcataagctcatctcgttggacacgatagaacatcatctctacgccactcatgagctagcagcaaatgcagcagtccttttttaa

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Protein seq

MTVHTISIGKCHCQQASHILSPFKPVFKLEVGTHASSPVGLGYTMNRVHGLHLIVLTSLCCVALSAGEGDRRSVLWRGGSIAVEDAADSVLVSPSGNFSCGFYKVATNAYTLAVWFTASADATVAWTANRDTPVNGVGSRAELRKDGSLVLQDYDGRVVWSTNTSGTPADRAQLLDTGNLVVSDAAGNRLWQSFDWPTDTLLPEQPVTRYRQLVSAEARGSPYSGYYKFYFDSSNILNLMYDGPEISSNYWPDPFKKWWDNNRTAFNSSRHGSFDRRGVFTASDQLQFNASDMGDGGVMRRLTLDYDGNLRLYSLDAAAGRWHVTWVAVQRQCDVHGLCGRYGICTYSQGPTCSCPDGYVPHDASDWSKGCRRTFDVRCGEDVAFAEMRHTDYWGFDLNYTAGISFDTCRRLCLVDCRCEAFGYRQGTGECYPKISLWNGRVMSIPYQTIYLKFPTGAKNLNPSLLHFDGHTCTMDERDATVSSSYLHGRRNTINFIYFYSFLAVVFVVEAIFVVVGYLFVFRADSVAAGRVGDEGYSLVFSHFRRFTYDELSDATCGFRDEIAKGGTGSVYKGVLEDGRSIAVKRLDEMTQADEVFRSELSVIGRINHMNLVRIWGFCSEHPHRLLVSEGYITPECWTVGRSINGKADVYSFGVVLLELVRGQRVCDWVAAAATADGAWNVQRLAVWLKEKLKCDDGELPAWLEELVDARLRGDFNHVQAAGLLELAVSCVDGEPSRRPSMSTVVHKLISLDTIEHHLYATHELAANAAVLF

Function Putative receptor protein kinase ZmPK1 [UniProtKB/Swiss-Prot:P17801]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsCMeo_04g0029650 OsCMeo_04g0029650.01 Chr04 33273597 33277251 - NAM
CDS seq

atgacggtacacactatctcaattgggaaatgtcactgtcagcaggctagccacattctttccccttttaaaccagtttttaagttggaagttggaactcacgcctccagccctgtggggttaggatacacgatgaatcgagtccatggcttgcacttgatcgtactcacctccctgtgttgcgttgctctttcggcgggcgagggcgatcgccgcagcgttctgtggcgcggcggctccatcgccgtggaggacgccgccgacagcgtcctcgtgtcgccgagcggcaacttctcgtgcggcttctacaaggtggcgaccaacgcctacacgctcgccgtctggttcaccgcgtccgccgacgccaccgtcgcgtggacggccaaccgcgacacccccgtgaacggcgtcggctcgcgcgccgagctccgcaaggacggctcgctggtgctgcaggactacgacggccgcgtcgtgtggagcaccaacaccagcggcacgccggccgaccgcgcccagctcctcgacaccggcaacctcgtcgtctccgacgccgccggcaaccggctgtggcagagcttcgactggcccacggacacgctcctgccggagcagcccgtgacgcggtacaggcagctcgtgtccgccgaggcgaggggctccccgtactccggctactacaagttctacttcgacagcagcaacatcctcaacctgatgtacgacggaccggagatcagcagcaactactggccggaccccttcaagaagtggtgggacaacaaccggacggcgttcaacagcagccgccacggcagcttcgaccgccgcggcgtcttcacggcgagcgaccagctgcagttcaacgcctccgacatgggcgacggaggcgtcatgaggcggctcacgctcgactacgacggcaacctccgcctctacagcctcgacgccgccgccgggcgctggcacgtcacgtgggtcgcggtccagaggcagtgcgacgtgcacggtttgtgcggccgctacggcatatgcacgtacagccaaggcccgacgtgctcctgccccgacggctatgtgcctcacgacgcgagcgactggagcaagggatgccggcgcacgttcgacgtcaggtgcggcgaggacgtcgcgttcgccgagatgcggcacaccgactactggggcttcgacctcaactacaccgccgggatctcgtttgacacgtgccggcgtctctgcctcgtcgactgccgctgcgaggcgttcggttaccggcagggcaccggtgagtgctaccccaagatctctctctggaacggccgggttatgagcattccgtaccaaaccatctacctcaagttccctacgggtgccaagaacctgaacccgtccttgctgcacttcgatggccacacctgcaccatggacgaacgggacgctacggtcagcagctcgtaccttcatggcaggcgcaacacgataaacttcatctacttctacagcttcctcgcggttgtgttcgtcgtggaggccatttttgtcgtcgtgggttacctgtttgtctttcgagctgactccgtggcggcaggacgggtcggtgatgaagggtacagcttggtgtttagccatttccggaggttcacctacgacgagctatcagacgcgacgtgcggattcagagacgagattgctaagggcgggacgggatccgtgtacaagggtgttcttgaggatggccggagcatcgccgtgaagcggctggacgagatgacgcaggccgacgaggtgttccggtcggagctgagcgtaatcgggcggatcaaccacatgaacctcgtcaggatatggggcttctgctccgaacacccgcaccgcctcctcgtctccgagggctacattacgccagagtgctggacagttggtcgctcgatcaacggcaaagccgacgtgtacagcttcggcgtcgtgctcctcgagctggtcagggggcagagggtgtgcgactgggtagcggctgcggcgacggccgacggggcatggaatgtccagcgactggccgtgtggctcaaggagaagctgaagtgcgacgacggcgagctgccggcgtggctggaggagctcgtggacgcgcggctgcgcggtgacttcaaccatgtgcaggcagccgggttgctggagctggcggtttcgtgcgtggacggtgagcctagcaggcggccgagcatgagcacggttgttcataagctcatctcgttggacacgatagaacatcatctctacgccactcatgagctagcagcaaatgcagcagtccttttttaa

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Protein seq

MTVHTISIGKCHCQQASHILSPFKPVFKLEVGTHASSPVGLGYTMNRVHGLHLIVLTSLCCVALSAGEGDRRSVLWRGGSIAVEDAADSVLVSPSGNFSCGFYKVATNAYTLAVWFTASADATVAWTANRDTPVNGVGSRAELRKDGSLVLQDYDGRVVWSTNTSGTPADRAQLLDTGNLVVSDAAGNRLWQSFDWPTDTLLPEQPVTRYRQLVSAEARGSPYSGYYKFYFDSSNILNLMYDGPEISSNYWPDPFKKWWDNNRTAFNSSRHGSFDRRGVFTASDQLQFNASDMGDGGVMRRLTLDYDGNLRLYSLDAAAGRWHVTWVAVQRQCDVHGLCGRYGICTYSQGPTCSCPDGYVPHDASDWSKGCRRTFDVRCGEDVAFAEMRHTDYWGFDLNYTAGISFDTCRRLCLVDCRCEAFGYRQGTGECYPKISLWNGRVMSIPYQTIYLKFPTGAKNLNPSLLHFDGHTCTMDERDATVSSSYLHGRRNTINFIYFYSFLAVVFVVEAIFVVVGYLFVFRADSVAAGRVGDEGYSLVFSHFRRFTYDELSDATCGFRDEIAKGGTGSVYKGVLEDGRSIAVKRLDEMTQADEVFRSELSVIGRINHMNLVRIWGFCSEHPHRLLVSEGYITPECWTVGRSINGKADVYSFGVVLLELVRGQRVCDWVAAAATADGAWNVQRLAVWLKEKLKCDDGELPAWLEELVDARLRGDFNHVQAAGLLELAVSCVDGEPSRRPSMSTVVHKLISLDTIEHHLYATHELAANAAVLF

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0654800 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g56080 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os04g0654800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0029320 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0030080 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0029660 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0029470 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0029740 RBH 0.0 1.367026 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0526300 RBH 0.0348055 0.776109 0.002882
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0028370 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0530900 RBH 0.02104 0.347359 0.0023985
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0028820 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0028660 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0028770 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0029350 RBH 0.0 0.000000 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0029330 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G028790 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0028570 RBH 0.0 0.0 0.277920
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Huazhong Agricultural University

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