Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_04g0025750 | OGI:04089580 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr04:30094099-30098932 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctcgggccctatcacctctcgctcccgtgcatgcaccacagagaagtacagttgagcataggcgacatggtgtgcaggcgagcaagcattccagccgccacagaggcggctgctgtggcttcatggcctctcggcccactggcgctcgcgctcgcgctcgccatcctctcggcgatgccccacgtcgcgctctcccagaacctgacgtgcaaggatgtcccctttcccttccgcgaggaaaggagcggagcaacctctgtccccgggttcatggtaacatgcgggcgaaacaacgaggccatgctccggatcggcgagcatatctacaaaatcgacaaggtgtcggtgccggaacacttcatcaccatacgtgcagggcccatccaacaggtgtgctacgaccgcagcaggaggccgaagcagatcaagccgatcaccagagtcgatccggctccggctccgacgagcttgcaggccacgcccttcaccttctccaggcgcaataaactcgtcgccaccggctgcaactacaggttcttcgctaacttcacgagctcgtcgggtggtggggacgggacacccacgagctgcgacacctggtgcaacgacggaagctccgacaccatcttcaacggctcatgcgccgataaggcctgctgcacgaccgagatgcagatggatggcgcgcaggaattcaacctgacgttaaagccgtcggggaatgtcgaggccagcacctgcagtgccgtcttcttcctcgacaaagacgagcaagtcttcactagcgccggtgatggccggaatatggcactgaaagaagcgctggtgccgctcggttaccgcaagatgttcttggattgggcgattccgggcaactgcgagcagaactccgcgtcacagtacccgtgtggcagcatgagcacgtgcaacgacgtgtacaacggaacgagctacatctgcagatgcaatgaagggtacgaggggaacccgtacgagcaaaacgggtgctcaggtaagtactttcatcgacaacagacaggctagtacagtacgttttaaagacagatatgattagggagctcgctgttgttcattttcacttcaagaacttgtgatttagcctgtgaaaaaacagataatttgggagctcgctcgattacctgctggctatgaatagaactatgtttttttctgctttctgaatgaagcttcgcactatttatgaagatatcaacgaatgccgggatatgaataacaacaactgcagcagagatgcaacctgtacaaacactgatggaggctttacttgctcttgccccaagaacacggttggcgatggttacagggctgggacaggctgcagtattgactcccttccgccatctggtaacatgtcacgtatttttggaccgaacaaaatcctattaatcaccgttgcatcacccatcacaattctcattcgcatatatataggtactactccctccgcttttttttagtttgatataccaacatttttaacacaaaacaaacatagtactatcaaaagtgcattcaatgttagatttattaaaactaatttggtgtcgtgaatgttgctaattattttataaatttgattaaacttaagaaaaattgatcaagaaaaaaaagccagatcatcttgtaacataaaaaaaaagagtcaaggatgaaaacggaggaaataattgattcagtccccttgtgccagaagttaaaggtattaggagtatataagattagttttgaaaactgttcggttcttttgctccccttttacctaaaaatgtcaatataaaaggatatatttctttctcttgacacgctacaaagacattgtgtgcatcttctatggctggaatatagtaagttcttagctgtactatttaagtacttcaatatggctgtacgtaatatttaggacggagggagtatgttctactcctaggccttgtttggatcctccgaactattaaatagtcctctggaatcttactatttagaattattaaacgtagattaccgataaaaccgattccataacccttagatgaatctaatgatgtatattaatctatgattaacagctgattactgtagcatcattataacaaatcatggattaatatatctcgttagattcgtctcgcaaaatagtctagggttatgaaatggtttttgtcagtaatctatgtttaatactcttaaataacgagattctggagggccaaataggaccctagtaatgcgaagaatctgaccaataacagtagagcattctccctcaaaccaaccgcaaggtacgataaagcagagtgcagtttcttcacagcacagaagagtaatttaagtgcagtctttctaataaggaaagaacaaagtttccactgttcaaatttctgtttagtttaacgaatggaaacaatctattcgttaaatgaaacattaatcggaacgacttcgagatattcttttcaacaatgaaaattaagggtctgtttagatcccaccttaaaattttatatcctatcacatcgaacgtttgaacacctgcatgaagtaataaatatagactaaaaaataactaattgtaaagattgcaactactttgcgagacgaatcttttaagcctaattgctacatgatttgacaatgtggtgctacagtaaatatgtgctaataacggattaattaggtctaataaattcgtctcgcagtttactgacggatactgtaattagtttttttattagtgccaaaacaccccatgcgacaccctatataatacctgatgtgacacgccaaaactttacacccctaaatctaaacaccctctaaaccaccagcagactacatcatctttcatttggaaaaacttaattgcatgcaatttactattatatttacttattattaggtctagatgtgtgtgctcacccagaaaggaacccttgcatgtacccagagtactgcaaggatgaacaaggagtaacttcgtgtgcttgcccggaaggcagaaatggcgatggcaggaagaagggaagtggctgcaaaaggcactttcctttagatactgctttgggtaacatactcaacacccagcattcttcatcagataattcattctctcttttatttttatttctcattcctctgctattaatgcaattgatatataaaaaatatctccattgcagaactgctgatccataatatatagccgttaatgattacatcattattaacatgaatgatgaaacatcgtatagatatgaccagtgtattgactgcattcatgattaatgatacaattgagctagcaaaactagattagacatagctaatgacgataaacatgaaataatgtgttagggctgtaaaaaatacctcaatagtattgtttttgcacgaaagaattgaagtcggaactcataaataaaccggcaccatgcacaatcggtcatagaatcctaatatggctcgcacttttacattttcttttttttaaaggaaaacttttacattttcttttacttccacaagagatcggttaaggaagaaaattaacacaagttgtggatattctcatacaatgtctgcaggtgtaggtcttgcactgacggtcacgctggctacaacattgctgtgctactactggacaatgaagaaaagaaaggtggcaagaaagagagctgagttattcaggaaaaatggagggttgctactgcagcaaagatttttgatgatcacttctcaaggtgaggagtcatcagcaaagatatttagtgcagaagaacttaagaatgccactgacaattatagtgatggccgaatccttggccgaggtgcaaatggcactgtttacaaaggaatccttccgaataggactacgattgccataaagaagtctattttgtttgatgaaagccatgtggagcaatttgtcaatgagattaccatcttatcacagattgatcacccaaatgttgtcaagcttttgggatgctgtttagagacaaaagttccgttgttggtttatgagttcattcctaatggaacactcttccaacacatccacaacaagaggactttaacatgggaagattgcttaaggatagctgaagaaacagcaggtgcacttgcctatctccactctacatcttctacaccaatcattcacagagacattaaatcaagcaacatattgttggatgagaacttcgtggctaaaatagcagacttcggtgcatcaagatcagtcccatctgatcatactcatgtaacaactctaattcaaggaacaattggctaccttgatcctgaatatttccaaactagccagctcacagagaagagtgacgtctatagctttggagtagttcttgcagagctgttgacaagacaaaagcctatttctgtaggtaggccggaggagtcctgtaacttagctatgtatattgtgatcttgcttaatgaaaggcgtctactacaggagatagagccacagattttggtagaagcaggtgaagagcagatatacgctgttgcacagctctcagccagatgcttaaatgttaagggagaagaacgaccagttatgagggaagtggcttcagttctacatgggctaagagagtcgtttgacgaggagcaaatcatcagaagtgatgagtcaatacagataatcaatgaacaagagagtgtacatagtgaggcaaggccaatttccagcctgcagtcttcagacgaaactagtactacccagtacagcttgccatctgaaatactatctgcttctcatttggaaagatga
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| CDS seq | atgcaccacagagaagtacagttgagcataggcgacatggtgtgcaggcgagcaagcattccagccgccacagaggcggctgctgtggcttcatggcctctcggcccactggcgctcgcgctcgcgctcgccatcctctcggcgatgccccacgtcgcgctctcccagaacctgacgtgcaaggatgtcccctttcccttccgcgaggaaaggagcggagcaacctctgtccccgggttcatggtaacatgcgggcgaaacaacgaggccatgctccggatcggcgagcatatctacaaaatcgacaaggtgtcggtgccggaacacttcatcaccatacgtgcagggcccatccaacaggtgtgctacgaccgcagcaggaggccgaagcagatcaagccgatcaccagagtcgatccggctccggctccgacgagcttgcaggccacgcccttcaccttctccaggcgcaataaactcgtcgccaccggctgcaactacaggttcttcgctaacttcacgagctcgtcgggtggtggggacgggacacccacgagctgcgacacctggtgcaacgacggaagctccgacaccatcttcaacggctcatgcgccgataaggcctgctgcacgaccgagatgcagatggatggcgcgcaggaattcaacctgacgttaaagccgtcggggaatgtcgaggccagcacctgcagtgccgtcttcttcctcgacaaagacgagcaagtcttcactagcgccggtgatggccggaatatggcactgaaagaagcgctggtgccgctcggttaccgcaagatgttcttggattgggcgattccgggcaactgcgagcagaactccgcgtcacagtacccgtgtggcagcatgagcacgtgcaacgacgtgtacaacggaacgagctacatctgcagatgcaatgaagggtacgaggggaacccgtacgagcaaaacgggtgctcagatatcaacgaatgccgggatatgaataacaacaactgcagcagagatgcaacctgtacaaacactgatggaggctttacttgctcttgccccaagaacacggttggcgatggttacagggctgggacaggctgcagtattgactcccttccgccatctgatgtgtgtgctcacccagaaaggaacccttgcatgtacccagagtactgcaaggatgaacaaggagtaacttcgtgtgcttgcccggaaggcagaaatggcgatggcaggaagaagggaagtggctgcaaaaggcactttcctttagatactgctttgggtgtaggtcttgcactgacggtcacgctggctacaacattgctgtgctactactggacaatgaagaaaagaaaggtggcaagaaagagagctgagttattcaggaaaaatggagggttgctactgcagcaaagatttttgatgatcacttctcaaggtgcacttgcctatctccactctacatcttctacaccaatcattcacagagacattaaatcaagcaacatattgttggatgagaacttcgtggctaaaatagcagacttcggtgcatcaagatcagtcccatctgatcatactcatgtaacaactctaattcaaggaacaattggctaccttgatcctgaatatttccaaactagccagctcacagagaagagtgacgtctatagctttggagtagttcttgcagagctgttgacaagacaaaagcctatttctgtaggtaggccggaggagtcctgtaacttagctatgtatattgtgatcttgcttaatgaaaggcgtctactacaggagatagagccacagattttggtagaagcaggtgaagagcagatatacgctgttgcacagctctcagccagatgcttaaatgttaagggagaagaacgaccagttatgagggaagtggcttcagttctacatgggctaagagagtcgtttgacgaggagcaaatcatcagaagtgatgagtcaatacagataatcaatgaacaagagagtgtacatagtgaggcaaggccaatttccagcctgcagtcttcagacgaaactagtactacccagtacagcttgccatctgaaatactatctgcttctcatttggaaagatga
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| Protein seq | MHHREVQLSIGDMVCRRASIPAATEAAAVASWPLGPLALALALAILSAMPHVALSQNLTCKDVPFPFREERSGATSVPGFMVTCGRNNEAMLRIGEHIYKIDKVSVPEHFITIRAGPIQQVCYDRSRRPKQIKPITRVDPAPAPTSLQATPFTFSRRNKLVATGCNYRFFANFTSSSGGGDGTPTSCDTWCNDGSSDTIFNGSCADKACCTTEMQMDGAQEFNLTLKPSGNVEASTCSAVFFLDKDEQVFTSAGDGRNMALKEALVPLGYRKMFLDWAIPGNCEQNSASQYPCGSMSTCNDVYNGTSYICRCNEGYEGNPYEQNGCSDINECRDMNNNNCSRDATCTNTDGGFTCSCPKNTVGDGYRAGTGCSIDSLPPSDVCAHPERNPCMYPEYCKDEQGVTSCACPEGRNGDGRKKGSGCKRHFPLDTALGVGLALTVTLATTLLCYYWTMKKRKVARKRAELFRKNGGLLLQQRFLMITSQGALAYLHSTSSTPIIHRDIKSSNILLDENFVAKIADFGASRSVPSDHTHVTTLIQGTIGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTRQKPISVGRPEESCNLAMYIVILLNERRLLQEIEPQILVEAGEEQIYAVAQLSARCLNVKGEERPVMREVASVLHGLRESFDEEQIIRSDESIQIINEQESVHSEARPISSLQSSDETSTTQYSLPSEILSASHLER |
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| Function | Wall-associated receptor kinase-like 22 [UniProtKB/Swiss-Prot:Q8RY17] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0025750 | OsCMeo_04g0025750.01 | Chr04 | 30094099 | 30098932 | + | NAM | ||
| CDS seq | atgcaccacagagaagtacagttgagcataggcgacatggtgtgcaggcgagcaagcattccagccgccacagaggcggctgctgtggcttcatggcctctcggcccactggcgctcgcgctcgcgctcgccatcctctcggcgatgccccacgtcgcgctctcccagaacctgacgtgcaaggatgtcccctttcccttccgcgaggaaaggagcggagcaacctctgtccccgggttcatggtaacatgcgggcgaaacaacgaggccatgctccggatcggcgagcatatctacaaaatcgacaaggtgtcggtgccggaacacttcatcaccatacgtgcagggcccatccaacaggtgtgctacgaccgcagcaggaggccgaagcagatcaagccgatcaccagagtcgatccggctccggctccgacgagcttgcaggccacgcccttcaccttctccaggcgcaataaactcgtcgccaccggctgcaactacaggttcttcgctaacttcacgagctcgtcgggtggtggggacgggacacccacgagctgcgacacctggtgcaacgacggaagctccgacaccatcttcaacggctcatgcgccgataaggcctgctgcacgaccgagatgcagatggatggcgcgcaggaattcaacctgacgttaaagccgtcggggaatgtcgaggccagcacctgcagtgccgtcttcttcctcgacaaagacgagcaagtcttcactagcgccggtgatggccggaatatggcactgaaagaagcgctggtgccgctcggttaccgcaagatgttcttggattgggcgattccgggcaactgcgagcagaactccgcgtcacagtacccgtgtggcagcatgagcacgtgcaacgacgtgtacaacggaacgagctacatctgcagatgcaatgaagggtacgaggggaacccgtacgagcaaaacgggtgctcagatatcaacgaatgccgggatatgaataacaacaactgcagcagagatgcaacctgtacaaacactgatggaggctttacttgctcttgccccaagaacacggttggcgatggttacagggctgggacaggctgcagtattgactcccttccgccatctgatgtgtgtgctcacccagaaaggaacccttgcatgtacccagagtactgcaaggatgaacaaggagtaacttcgtgtgcttgcccggaaggcagaaatggcgatggcaggaagaagggaagtggctgcaaaaggcactttcctttagatactgctttgggtgtaggtcttgcactgacggtcacgctggctacaacattgctgtgctactactggacaatgaagaaaagaaaggtggcaagaaagagagctgagttattcaggaaaaatggagggttgctactgcagcaaagatttttgatgatcacttctcaaggtgcacttgcctatctccactctacatcttctacaccaatcattcacagagacattaaatcaagcaacatattgttggatgagaacttcgtggctaaaatagcagacttcggtgcatcaagatcagtcccatctgatcatactcatgtaacaactctaattcaaggaacaattggctaccttgatcctgaatatttccaaactagccagctcacagagaagagtgacgtctatagctttggagtagttcttgcagagctgttgacaagacaaaagcctatttctgtaggtaggccggaggagtcctgtaacttagctatgtatattgtgatcttgcttaatgaaaggcgtctactacaggagatagagccacagattttggtagaagcaggtgaagagcagatatacgctgttgcacagctctcagccagatgcttaaatgttaagggagaagaacgaccagttatgagggaagtggcttcagttctacatgggctaagagagtcgtttgacgaggagcaaatcatcagaagtgatgagtcaatacagataatcaatgaacaagagagtgtacatagtgaggcaaggccaatttccagcctgcagtcttcagacgaaactagtactacccagtacagcttgccatctgaaatactatctgcttctcatttggaaagatga
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| Protein seq | MHHREVQLSIGDMVCRRASIPAATEAAAVASWPLGPLALALALAILSAMPHVALSQNLTCKDVPFPFREERSGATSVPGFMVTCGRNNEAMLRIGEHIYKIDKVSVPEHFITIRAGPIQQVCYDRSRRPKQIKPITRVDPAPAPTSLQATPFTFSRRNKLVATGCNYRFFANFTSSSGGGDGTPTSCDTWCNDGSSDTIFNGSCADKACCTTEMQMDGAQEFNLTLKPSGNVEASTCSAVFFLDKDEQVFTSAGDGRNMALKEALVPLGYRKMFLDWAIPGNCEQNSASQYPCGSMSTCNDVYNGTSYICRCNEGYEGNPYEQNGCSDINECRDMNNNNCSRDATCTNTDGGFTCSCPKNTVGDGYRAGTGCSIDSLPPSDVCAHPERNPCMYPEYCKDEQGVTSCACPEGRNGDGRKKGSGCKRHFPLDTALGVGLALTVTLATTLLCYYWTMKKRKVARKRAELFRKNGGLLLQQRFLMITSQGALAYLHSTSSTPIIHRDIKSSNILLDENFVAKIADFGASRSVPSDHTHVTTLIQGTIGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTRQKPISVGRPEESCNLAMYIVILLNERRLLQEIEPQILVEAGEEQIYAVAQLSARCLNVKGEERPVMREVASVLHGLRESFDEEQIIRSDESIQIINEQESVHSEARPISSLQSSDETSTTQYSLPSEILSASHLER
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.342782 | 2.058598 | 0.232423 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0598800 | RBH | 0.0 | 0.000000 | 0.268550 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g51030 | RBH | 0.046090 | 0.066116 | 0.060309 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0598800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0025240 | RBH | 0.107927 | 7.517127 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0026020 | RBH | 0.088965 | 0.0 | 0.353508 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0030130 | RBH | 0.000000 | 1.564307 | 1.079215 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0025470 | RBH | 0.025591 | 0.054286 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0025720 | RBH | 1.723490 | 0.0 | 5.654591 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0477300 | RBH | 2.9229615 | 11.1259185 | 0.2180685 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0024470 | RBH | 0.067332 | 0.0 | 0.297681 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0481200 | RBH | 1.6369925 | 7.688754 | 0.475608 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0024940 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0024770 | RBH | 0.198394 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0024860 | RBH | 0.425194 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0025290 | RBH | 0.387630 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0025460 | RBH | 0.070162 | 0.369474 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G024690 | RBH | 0.000000 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0024580 | RBH | 0.345432 | 4.707494 | 2.519550 |
